RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 PCDHB13Q9Y5F0 798 aa9.23□□□□□ -0.93
SNX25-203ENST00000504959 TESPA1A2RU30 521 aaPredicted RBP9.23□□□□□ -0.93
SNX25-203ENST00000504959 PPP1R37O75864 691 aa9.23□□□□□ -0.93
SNX25-203ENST00000504959 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
SNX25-203ENST00000504959 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
SNX25-203ENST00000504959 CECR2Q9BXF3 1484 aa9.22□□□□□ -0.93
SNX25-203ENST00000504959 E2F4Q16254 413 aa9.22□□□□□ -0.93
SNX25-203ENST00000504959 BMP2KQ9NSY1 1161 aaPredicted RBP9.22□□□□□ -0.93
SNX25-203ENST00000504959 TIE1P35590 1138 aa9.21□□□□□ -0.94
SNX25-203ENST00000504959 MROH2BQ7Z745 1585 aa9.2□□□□□ -0.94
SNX25-203ENST00000504959 WIZO95785 1651 aa9.18□□□□□ -0.94
SNX25-203ENST00000504959 ZMYND10O75800 440 aa9.17□□□□□ -0.94
SNX25-203ENST00000504959 BAZ1AQ9NRL2 1556 aaPredicted RBP9.17□□□□□ -0.94
SNX25-203ENST00000504959 PSEN1P49768 467 aa9.17□□□□□ -0.94
SNX25-203ENST00000504959 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.95
SNX25-203ENST00000504959 POTEJP0CG39 1038 aa9.15□□□□□ -0.95
SNX25-203ENST00000504959 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.95
SNX25-203ENST00000504959 BICRAQ9NZM4 1560 aa9.13□□□□□ -0.95
SNX25-203ENST00000504959 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
SNX25-203ENST00000504959 POTEFA5A3E0 1075 aa9.13□□□□□ -0.95
SNX25-203ENST00000504959 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
SNX25-203ENST00000504959 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
SNX25-203ENST00000504959 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
SNX25-203ENST00000504959 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
SNX25-203ENST00000504959 SMARCA4P51532 1647 aa9.1□□□□□ -0.95
SNX25-203ENST00000504959 GPBP1L1Q9HC44 474 aaPredicted RBP9.08□□□□□ -0.96
SNX25-203ENST00000504959 NLRP6P59044 892 aa9.08□□□□□ -0.96
SNX25-203ENST00000504959 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
SNX25-203ENST00000504959 LARP6Q9BRS8 491 aaKnown RBP9.08□□□□□ -0.96
SNX25-203ENST00000504959 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
SNX25-203ENST00000504959 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
SNX25-203ENST00000504959 IER5LQ5T953 404 aa9.07□□□□□ -0.96
SNX25-203ENST00000504959 SMYD5Q6GMV2 418 aa9.06□□□□□ -0.96
SNX25-203ENST00000504959 TMEM106CQ9BVX2 250 aa9.06□□□□□ -0.96
SNX25-203ENST00000504959 COLQQ9Y215 455 aaPredicted RBP9.06□□□□□ -0.96
SNX25-203ENST00000504959 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
SNX25-203ENST00000504959 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
SNX25-203ENST00000504959 SEC24BO95487 1268 aa9.04□□□□□ -0.96
SNX25-203ENST00000504959 UBTFP17480 764 aaKnown RBP9.04□□□□□ -0.96
SNX25-203ENST00000504959 SCUBE2Q9NQ36 999 aa9.04□□□□□ -0.96
SNX25-203ENST00000504959 SOX12O15370 315 aa9.04□□□□□ -0.96
SNX25-203ENST00000504959 MFSD10Q14728 455 aa9.03□□□□□ -0.96
SNX25-203ENST00000504959 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
SNX25-203ENST00000504959 IL27Q8NEV9 243 aa9.02□□□□□ -0.96
SNX25-203ENST00000504959 AK7Q96M32 723 aa9.02□□□□□ -0.97
SNX25-203ENST00000504959 CRISPLD2Q9H0B8 497 aa9.02□□□□□ -0.97
SNX25-203ENST00000504959 PODXL2Q9NZ53 605 aa9.02□□□□□ -0.97
SNX25-203ENST00000504959 ARIH1Q9Y4X5 557 aaPredicted RBP9.02□□□□□ -0.97
SNX25-203ENST00000504959 PDE4AP27815 886 aa9.01□□□□□ -0.97
SNX25-203ENST00000504959 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
SNX25-203ENST00000504959 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
SNX25-203ENST00000504959 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
SNX25-203ENST00000504959 CAMK2BQ13554 666 aa8.98□□□□□ -0.97
SNX25-203ENST00000504959 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
SNX25-203ENST00000504959 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
SNX25-203ENST00000504959 KDM4CQ9H3R0 1056 aa8.98□□□□□ -0.97
SNX25-203ENST00000504959 SMARCA2P51531 1590 aa8.97□□□□□ -0.97
SNX25-203ENST00000504959 FAM9AQ8IZU1 332 aaPredicted RBP8.97□□□□□ -0.97
SNX25-203ENST00000504959 KRI1Q8N9T8 703 aaKnown RBP8.97□□□□□ -0.97
SNX25-203ENST00000504959 CCDC88BA6NC98 1476 aa8.96□□□□□ -0.97
SNX25-203ENST00000504959 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.97
SNX25-203ENST00000504959 EIF4G1Q04637 1599 aaKnown RBP8.96□□□□□ -0.98
SNX25-203ENST00000504959 POTEMA6NI47 508 aa8.96□□□□□ -0.98
SNX25-203ENST00000504959 PLCG2P16885 1265 aa8.95□□□□□ -0.98
SNX25-203ENST00000504959 TRIM66O15016 1216 aa8.94□□□□□ -0.98
SNX25-203ENST00000504959 POTEGQ6S5H5 508 aa8.94□□□□□ -0.98
SNX25-203ENST00000504959 PEG3Q9GZU2 1588 aa8.93□□□□□ -0.98
SNX25-203ENST00000504959 PDE4DQ08499 809 aa8.93□□□□□ -0.98
SNX25-203ENST00000504959 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
SNX25-203ENST00000504959 HRCP23327 699 aa8.92□□□□□ -0.98
SNX25-203ENST00000504959 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
SNX25-203ENST00000504959 PCGF6Q9BYE7 350 aa8.91□□□□□ -0.98
SNX25-203ENST00000504959 OCEL1Q9H607 264 aa8.91□□□□□ -0.98
SNX25-203ENST00000504959 FAM163AQ96GL9 167 aaPredicted RBP8.9□□□□□ -0.98
SNX25-203ENST00000504959 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
SNX25-203ENST00000504959 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
SNX25-203ENST00000504959 C1orf115Q9H7X2 142 aa8.89□□□□□ -0.99
SNX25-203ENST00000504959 ABCC8Q09428 1581 aa8.89□□□□□ -0.99
SNX25-203ENST00000504959 ARID3AQ99856 593 aa8.88□□□□□ -0.99
SNX25-203ENST00000504959 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
SNX25-203ENST00000504959 BAZ1BQ9UIG0 1483 aaKnown RBP8.87□□□□□ -0.99
SNX25-203ENST00000504959 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
SNX25-203ENST00000504959 DPYSL4O14531 572 aa8.86□□□□□ -0.99
SNX25-203ENST00000504959 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
SNX25-203ENST00000504959 SLAIN1Q8ND83 568 aa8.86□□□□□ -0.99
SNX25-203ENST00000504959 GPR37O15354 613 aa8.85□□□□□ -0.99
SNX25-203ENST00000504959 PLSCR2Q9NRY7 297 aa8.85□□□□□ -0.99
SNX25-203ENST00000504959 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
SNX25-203ENST00000504959 PDCD7Q8N8D1 485 aaKnown RBP8.83□□□□□ -1
SNX25-203ENST00000504959 PLEKHG3A1L390 1219 aa8.83□□□□□ -1
SNX25-203ENST00000504959 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
SNX25-203ENST00000504959 GOLGA2Q08379 1002 aa8.83□□□□□ -1
SNX25-203ENST00000504959 PCDH10Q9P2E7 1040 aa8.83□□□□□ -1
SNX25-203ENST00000504959 ARID3CA6NKF2 412 aa8.82□□□□□ -1
SNX25-203ENST00000504959 PDIA6Q15084 440 aa8.82□□□□□ -1
SNX25-203ENST00000504959 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
SNX25-203ENST00000504959 CC2D2AQ9P2K1 1620 aa8.82□□□□□ -1
SNX25-203ENST00000504959 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
SNX25-203ENST00000504959 DSG2Q14126 1118 aa8.78□□□□□ -1
SNX25-203ENST00000504959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -11e-6■■■□□ 15.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms