RNA–Protein interactions for RNA: ENST00000504859.5

GRAMD2B-204, Transcript of GRAM domain containing 2B, humanhuman

TSL 5

Gene GRAMD2B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-204ENST00000504859 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
GRAMD2B-204ENST00000504859 RYDENQ9NUL5 291 aaKnown RBP10.06□□□□□ -0.8
GRAMD2B-204ENST00000504859 KIF3CO14782 793 aa10.04□□□□□ -0.8
GRAMD2B-204ENST00000504859 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
GRAMD2B-204ENST00000504859 TMC2Q8TDI7 906 aa10.01□□□□□ -0.81
GRAMD2B-204ENST00000504859 BBXQ8WY36 941 aaPredicted RBP10.01□□□□□ -0.81
GRAMD2B-204ENST00000504859 DOK7Q18PE1 504 aa10□□□□□ -0.81
GRAMD2B-204ENST00000504859 ZNF710Q8N1W2 664 aa9.99□□□□□ -0.81
GRAMD2B-204ENST00000504859 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
GRAMD2B-204ENST00000504859 RIMBP2O15034 1052 aa9.94□□□□□ -0.82
GRAMD2B-204ENST00000504859 EMP3P54852 163 aa9.94□□□□□ -0.82
GRAMD2B-204ENST00000504859 HOXB1P14653 301 aaPredicted RBP9.93□□□□□ -0.82
GRAMD2B-204ENST00000504859 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
GRAMD2B-204ENST00000504859 DSG2Q14126 1118 aa9.92□□□□□ -0.82
GRAMD2B-204ENST00000504859 GPR153Q6NV75 609 aa9.92□□□□□ -0.82
GRAMD2B-204ENST00000504859 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
GRAMD2B-204ENST00000504859 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.92□□□□□ -0.82
GRAMD2B-204ENST00000504859 FOXK1P85037 733 aa9.91□□□□□ -0.82
GRAMD2B-204ENST00000504859 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
GRAMD2B-204ENST00000504859 ARSIQ5FYB1 569 aa9.9□□□□□ -0.82
GRAMD2B-204ENST00000504859 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
GRAMD2B-204ENST00000504859 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
GRAMD2B-204ENST00000504859 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
GRAMD2B-204ENST00000504859 ZSWIM6Q9HCJ5 1215 aa9.9□□□□□ -0.82
GRAMD2B-204ENST00000504859 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
GRAMD2B-204ENST00000504859 PAXIP1Q6ZW49 1069 aaPredicted RBP9.89□□□□□ -0.83
GRAMD2B-204ENST00000504859 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
GRAMD2B-204ENST00000504859 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
GRAMD2B-204ENST00000504859 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
GRAMD2B-204ENST00000504859 CDAN1Q8IWY9 1227 aa9.87□□□□□ -0.83
GRAMD2B-204ENST00000504859 SLC34A2O95436 690 aa9.86□□□□□ -0.83
GRAMD2B-204ENST00000504859 PDE4AP27815 886 aa9.86□□□□□ -0.83
GRAMD2B-204ENST00000504859 HS3ST6Q96QI5 342 aa9.86□□□□□ -0.83
GRAMD2B-204ENST00000504859 LARP6Q9BRS8 491 aaKnown RBP9.85□□□□□ -0.83
GRAMD2B-204ENST00000504859 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
GRAMD2B-204ENST00000504859 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
GRAMD2B-204ENST00000504859 ERBB3P21860 1342 aa9.83□□□□□ -0.84
GRAMD2B-204ENST00000504859 NUDT7P0C024 238 aa9.83□□□□□ -0.84
GRAMD2B-204ENST00000504859 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
GRAMD2B-204ENST00000504859 VARS2Q5ST30 1063 aaKnown RBP9.81□□□□□ -0.84
GRAMD2B-204ENST00000504859 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
GRAMD2B-204ENST00000504859 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
GRAMD2B-204ENST00000504859 MFSD10Q14728 455 aa9.79□□□□□ -0.84
GRAMD2B-204ENST00000504859 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
GRAMD2B-204ENST00000504859 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
GRAMD2B-204ENST00000504859 OXER1Q8TDS5 423 aa9.76□□□□□ -0.85
GRAMD2B-204ENST00000504859 LHX6Q9UPM6 363 aa9.76□□□□□ -0.85
GRAMD2B-204ENST00000504859 KDM4FA0A1W2PPD8 638 aa9.75□□□□□ -0.85
GRAMD2B-204ENST00000504859 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
GRAMD2B-204ENST00000504859 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
GRAMD2B-204ENST00000504859 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
GRAMD2B-204ENST00000504859 TBC1D12O60347 775 aa9.72□□□□□ -0.85
GRAMD2B-204ENST00000504859 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
GRAMD2B-204ENST00000504859 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
GRAMD2B-204ENST00000504859 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
GRAMD2B-204ENST00000504859 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
GRAMD2B-204ENST00000504859 MAP3K9P80192 1104 aa9.65□□□□□ -0.86
GRAMD2B-204ENST00000504859 EVI5O60447 810 aa9.64□□□□□ -0.87
GRAMD2B-204ENST00000504859 POTEEQ6S8J3 1075 aa9.64□□□□□ -0.87
GRAMD2B-204ENST00000504859 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
GRAMD2B-204ENST00000504859 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
GRAMD2B-204ENST00000504859 DPYSL4O14531 572 aa9.62□□□□□ -0.87
GRAMD2B-204ENST00000504859 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
GRAMD2B-204ENST00000504859 SPNS2Q8IVW8 549 aa9.62□□□□□ -0.87
GRAMD2B-204ENST00000504859 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
GRAMD2B-204ENST00000504859 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
GRAMD2B-204ENST00000504859 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
GRAMD2B-204ENST00000504859 E2F4Q16254 413 aa9.59□□□□□ -0.87
GRAMD2B-204ENST00000504859 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
GRAMD2B-204ENST00000504859 PBX2P40425 430 aa9.57□□□□□ -0.88
GRAMD2B-204ENST00000504859 FOSBP53539 338 aa9.57□□□□□ -0.88
GRAMD2B-204ENST00000504859 LSM11P83369 360 aaKnown RBP eCLIP9.57□□□□□ -0.88
GRAMD2B-204ENST00000504859 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
GRAMD2B-204ENST00000504859 MMRN1Q13201 1228 aa9.56□□□□□ -0.88
GRAMD2B-204ENST00000504859 ARHGAP33O14559 1287 aa9.55□□□□□ -0.88
GRAMD2B-204ENST00000504859 PSEN2P49810 448 aa9.55□□□□□ -0.88
GRAMD2B-204ENST00000504859 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
GRAMD2B-204ENST00000504859 KCNK17Q96T54 332 aa9.53□□□□□ -0.88
GRAMD2B-204ENST00000504859 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.89
GRAMD2B-204ENST00000504859 PCDHGA10Q9Y5H3 936 aa9.52□□□□□ -0.89
GRAMD2B-204ENST00000504859 PDIA6Q15084 440 aa9.51□□□□□ -0.89
GRAMD2B-204ENST00000504859 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
GRAMD2B-204ENST00000504859 ADAM33Q9BZ11 813 aa9.51□□□□□ -0.89
GRAMD2B-204ENST00000504859 DDX12PQ92771 950 aa9.5□□□□□ -0.89
GRAMD2B-204ENST00000504859 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
GRAMD2B-204ENST00000504859 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
GRAMD2B-204ENST00000504859 ARIH1Q9Y4X5 557 aaPredicted RBP9.49□□□□□ -0.89
GRAMD2B-204ENST00000504859 PHF14O94880 888 aa9.47□□□□□ -0.89
GRAMD2B-204ENST00000504859 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
GRAMD2B-204ENST00000504859 KCNV2Q8TDN2 545 aa9.47□□□□□ -0.89
GRAMD2B-204ENST00000504859 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.9
GRAMD2B-204ENST00000504859 PTPREP23469 700 aa9.46□□□□□ -0.9
GRAMD2B-204ENST00000504859 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
GRAMD2B-204ENST00000504859 KCNH8Q96L42 1107 aa9.46□□□□□ -0.9
GRAMD2B-204ENST00000504859 PTGER2P43116 358 aa9.45□□□□□ -0.9
GRAMD2B-204ENST00000504859 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
GRAMD2B-204ENST00000504859 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
GRAMD2B-204ENST00000504859 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
GRAMD2B-204ENST00000504859 TK2O00142 265 aa9.42□□□□□ -0.9
GRAMD2B-204ENST00000504859 NBR1Q14596 966 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms