RNA–Protein interactions for RNA: ENST00000504579.5

CANX-208, Transcript of calnexin, humanhuman

TSL 4

Gene CANX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-208ENST00000504579 ARHGAP5Q13017 1502 aa37.23■■■■□ 3.55
CANX-208ENST00000504579 MAGI2Q86UL8 1455 aa37.23■■■■□ 3.55
CANX-208ENST00000504579 ARID4BQ4LE39 1312 aaPredicted RBP37.22■■■■□ 3.55
CANX-208ENST00000504579 YEATS2Q9ULM3 1422 aa37.21■■■■□ 3.55
CANX-208ENST00000504579 ADAMTSL3P82987 1691 aa37.21■■■■□ 3.55
CANX-208ENST00000504579 ZFYVE16Q7Z3T8 1539 aa37.2■■■■□ 3.55
CANX-208ENST00000504579 BCORL1Q5H9F3 1711 aa37.16■■■■□ 3.54
CANX-208ENST00000504579 CEP162Q5TB80 1403 aa37.16■■■■□ 3.54
CANX-208ENST00000504579 CDC42BPBQ9Y5S2 1711 aa37.13■■■■□ 3.53
CANX-208ENST00000504579 PREX2Q70Z35 1606 aa37.11■■■■□ 3.53
CANX-208ENST00000504579 PTPRMP28827 1452 aa37.11■■■■□ 3.53
CANX-208ENST00000504579 ZNF518AQ6AHZ1 1483 aa37.1■■■■□ 3.53
CANX-208ENST00000504579 AFAP1Q8N556 730 aa37.08■■■■□ 3.53
CANX-208ENST00000504579 HECW2Q9P2P5 1572 aa37.08■■■■□ 3.53
CANX-208ENST00000504579 SIGLEC1Q9BZZ2 1709 aa37.06■■■■□ 3.52
CANX-208ENST00000504579 MADDQ8WXG6 1647 aa37.06■■■■□ 3.52
CANX-208ENST00000504579 KDM5CP41229 1560 aa37.04■■■■□ 3.52
CANX-208ENST00000504579 ATP10AO60312 1499 aa37.02■■■■□ 3.52
CANX-208ENST00000504579 CDC42BPAQ5VT25 1732 aa37.02■■■■□ 3.52
CANX-208ENST00000504579 ABCC1P33527 1531 aa37■■■■□ 3.51
CANX-208ENST00000504579 ARHGEF12Q9NZN5 1544 aa37■■■■□ 3.51
CANX-208ENST00000504579 LOC105371045A0A1W2PR82 267 aa37■■■■□ 3.51
CANX-208ENST00000504579 C9orf84Q5VXU9 1444 aa36.98■■■■□ 3.51
CANX-208ENST00000504579 GPATCH8Q9UKJ3 1502 aaKnown RBP36.98■■■■□ 3.51
CANX-208ENST00000504579 TRAPPC8Q9Y2L5 1435 aa36.96■■■■□ 3.51
CANX-208ENST00000504579 MTUS2Q5JR59 1369 aa36.96■■■■□ 3.51
CANX-208ENST00000504579 MLH3Q9UHC1 1453 aa36.92■■■■□ 3.5
CANX-208ENST00000504579 ITSN2Q9NZM3 1697 aa36.91■■■■□ 3.5
CANX-208ENST00000504579 RIMS1Q86UR5 1692 aaKnown RBP36.9■■■■□ 3.5
CANX-208ENST00000504579 MLECQ14165 292 aa36.9■■■■□ 3.5
CANX-208ENST00000504579 MYT1LQ9UL68 1186 aa36.89■■■■□ 3.5
CANX-208ENST00000504579 ZNF777Q9ULD5 760 aaPredicted RBP36.89■■■■□ 3.5
CANX-208ENST00000504579 SAMD9LQ8IVG5 1584 aa36.87■■■■□ 3.49
CANX-208ENST00000504579 CCNB3Q8WWL7 1395 aa36.87■■■■□ 3.49
CANX-208ENST00000504579 DIP2CQ9Y2E4 1556 aa36.87■■■■□ 3.49
CANX-208ENST00000504579 CFDP1Q9UEE9 299 aaPredicted RBP36.85■■■■□ 3.49
CANX-208ENST00000504579 EHBP1L1Q8N3D4 1523 aa36.85■■■■□ 3.49
CANX-208ENST00000504579 ABCA6Q8N139 1617 aa36.81■■■■□ 3.48
CANX-208ENST00000504579 SYCP2Q9BX26 1530 aa36.8■■■■□ 3.48
CANX-208ENST00000504579 REREQ9P2R6 1566 aa36.8■■■■□ 3.48
CANX-208ENST00000504579 KIAA1107Q9UPP5 1409 aa36.78■■■■□ 3.48
CANX-208ENST00000504579 HNRNPMP52272 730 aaKnown RBP eCLIP36.78■■■■□ 3.482e-9■■■■■ 36.1
CANX-208ENST00000504579 FER1L4A9Z1Z3 1794 aa36.76■■■■□ 3.47
CANX-208ENST00000504579 PLEKHH2Q8IVE3 1493 aa36.75■■■■□ 3.47
CANX-208ENST00000504579 TIAM1Q13009 1591 aa36.75■■■■□ 3.47
CANX-208ENST00000504579 KIDINS220Q9ULH0 1771 aa36.75■■■■□ 3.47
CANX-208ENST00000504579 VPS8Q8N3P4 1428 aa36.75■■■■□ 3.47
CANX-208ENST00000504579 PLPPR3Q6T4P5 718 aa36.73■■■■□ 3.47
CANX-208ENST00000504579 LMTK3Q96Q04 1460 aa36.71■■■■□ 3.47
CANX-208ENST00000504579 AGLP35573 1532 aa36.69■■■■□ 3.46
CANX-208ENST00000504579 SPAG9O60271 1321 aaKnown RBP36.69■■■■□ 3.46
CANX-208ENST00000504579 ZNF644Q9H582 1327 aaPredicted RBP36.67■■■■□ 3.46
CANX-208ENST00000504579 NCOA2Q15596 1464 aa36.65■■■■□ 3.46
CANX-208ENST00000504579 ATP7AQ04656 1500 aa36.6■■■■□ 3.45
CANX-208ENST00000504579 SUPT6HQ7KZ85 1726 aaKnown RBP36.6■■■■□ 3.45
CANX-208ENST00000504579 MBD5Q9P267 1494 aa36.59■■■■□ 3.45
CANX-208ENST00000504579 INO80Q9ULG1 1556 aaPredicted RBP36.58■■■■□ 3.45
CANX-208ENST00000504579 CEBPAP49715 358 aaPredicted RBP36.58■■■■□ 3.45
CANX-208ENST00000504579 LRRC9Q6ZRR7 1453 aa36.56■■■■□ 3.44
CANX-208ENST00000504579 MAP3K1Q13233 1512 aa36.52■■■■□ 3.44
CANX-208ENST00000504579 HSPA2P54652 639 aa36.51■■■■□ 3.44
CANX-208ENST00000504579 KANK4Q5T7N3 995 aaPredicted RBP36.48■■■■□ 3.43
CANX-208ENST00000504579 ESF1Q9H501 851 aaKnown RBP36.48■■■■□ 3.43
CANX-208ENST00000504579 A2MP01023 1474 aa36.48■■■■□ 3.43
CANX-208ENST00000504579 CAMSAP2Q08AD1 1489 aa36.47■■■■□ 3.43
CANX-208ENST00000504579 PLXNC1O60486 1568 aa36.47■■■■□ 3.43
CANX-208ENST00000504579 RTEL1-TNFRSF6BF6WH68 1400 aa36.43■■■■□ 3.42
CANX-208ENST00000504579 CNTLNQ9NXG0 1405 aa36.42■■■■□ 3.42
CANX-208ENST00000504579 CCDC141Q6ZP82 1450 aa36.41■■■■□ 3.42
CANX-208ENST00000504579 C3P01024 1663 aa36.4■■■■□ 3.42
CANX-208ENST00000504579 PREX1Q8TCU6 1659 aa36.4■■■■□ 3.42
CANX-208ENST00000504579 RSPH4AQ5TD94 716 aa36.39■■■■□ 3.42
CANX-208ENST00000504579 ILDR1Q86SU0 546 aaPredicted RBP36.37■■■■□ 3.41
CANX-208ENST00000504579 ADGBQ8N7X0 1667 aa36.37■■■■□ 3.41
CANX-208ENST00000504579 UHRF1BP1Q6BDS2 1440 aa36.33■■■■□ 3.41
CANX-208ENST00000504579 ARHGEF5Q12774 1597 aa36.32■■■■□ 3.4
CANX-208ENST00000504579 DHX29Q7Z478 1369 aaKnown RBP36.31■■■■□ 3.4
CANX-208ENST00000504579 GGT6Q6P531 493 aa36.3■■■■□ 3.4
CANX-208ENST00000504579 ZMYM3Q14202 1370 aa36.29■■■■□ 3.4
CANX-208ENST00000504579 MROH2AA6NES4 1674 aa36.29■■■■□ 3.4
CANX-208ENST00000504579 MYOM3Q5VTT5 1437 aa36.28■■■■□ 3.4
CANX-208ENST00000504579 SETD1BQ9UPS6 1966 aaKnown RBP36.27■■■■□ 3.4
CANX-208ENST00000504579 MIA2Q96PC5 1412 aa36.26■■■■□ 3.4
CANX-208ENST00000504579 APLP2Q06481 763 aa36.26■■■■□ 3.4
CANX-208ENST00000504579 PPP6R1Q9UPN7 881 aa36.25■■■■□ 3.39
CANX-208ENST00000504579 TSPY4P0CV99 314 aa36.24■■■■□ 3.39
CANX-208ENST00000504579 TSPY10P0CW01 314 aa36.24■■■■□ 3.39
CANX-208ENST00000504579 NPATQ14207 1427 aa36.23■■■■□ 3.39
CANX-208ENST00000504579 CLTCQ00610 1675 aaKnown RBP36.22■■■■□ 3.39
CANX-208ENST00000504579 KIF3BO15066 747 aa36.17■■■■□ 3.38
CANX-208ENST00000504579 MAST1Q9Y2H9 1570 aa36.13■■■■□ 3.37
CANX-208ENST00000504579 PTPRKQ15262 1439 aa36.12■■■■□ 3.37
CANX-208ENST00000504579 STRCQ7RTU9 1775 aa36.1■■■■□ 3.37
CANX-208ENST00000504579 DMRT2Q9Y5R5 561 aa36.06■■■■□ 3.36
CANX-208ENST00000504579 FBXO41Q8TF61 875 aa36.03■■■■□ 3.36
CANX-208ENST00000504579 FAM135AQ9P2D6 1515 aa36.03■■■■□ 3.36
CANX-208ENST00000504579 PTPN23Q9H3S7 1636 aa36.02■■■■□ 3.36
CANX-208ENST00000504579 KDM5DQ9BY66 1539 aa36.02■■■■□ 3.36
CANX-208ENST00000504579 FGD6Q6ZV73 1430 aa36■■■■□ 3.35
CANX-208ENST00000504579 WASHC2CQ9Y4E1 1318 aa36■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms