RNA–Protein interactions for RNA: ENST00000504287.1

LINC02488-201, Transcript of long intergenic non-protein coding RNA 2488, humanhuman

TSL 2 BASIC

Gene LINC02488, Length 652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02488-201ENST00000504287 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
LINC02488-201ENST00000504287 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
LINC02488-201ENST00000504287 C2orf72A6NCS6 295 aa16.21■□□□□ 0.19
LINC02488-201ENST00000504287 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
LINC02488-201ENST00000504287 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
LINC02488-201ENST00000504287 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
LINC02488-201ENST00000504287 TMC2Q8TDI7 906 aa16.18■□□□□ 0.18
LINC02488-201ENST00000504287 PDE4AP27815 886 aa16.11■□□□□ 0.17
LINC02488-201ENST00000504287 FOXK1P85037 733 aa16.11■□□□□ 0.17
LINC02488-201ENST00000504287 TSHZ2Q9NRE2 1034 aa16.11■□□□□ 0.17
LINC02488-201ENST00000504287 HOXB3P14651 431 aaPredicted RBP16.09■□□□□ 0.17
LINC02488-201ENST00000504287 SNPHO15079 494 aa16.08■□□□□ 0.16
LINC02488-201ENST00000504287 DSG2Q14126 1118 aa16.08■□□□□ 0.16
LINC02488-201ENST00000504287 MFSD10Q14728 455 aa16.08■□□□□ 0.16
LINC02488-201ENST00000504287 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
LINC02488-201ENST00000504287 PLPP6Q8IY26 295 aa16.02■□□□□ 0.16
LINC02488-201ENST00000504287 PPP1R15BQ5SWA1 713 aa16.01■□□□□ 0.15
LINC02488-201ENST00000504287 DDX27Q96GQ7 796 aaKnown RBP16.01■□□□□ 0.15
LINC02488-201ENST00000504287 DOK7Q18PE1 504 aa16■□□□□ 0.15
LINC02488-201ENST00000504287 LCE2DQ5TA82 110 aaPredicted RBP16■□□□□ 0.15
LINC02488-201ENST00000504287 SLC34A2O95436 690 aa15.98■□□□□ 0.15
LINC02488-201ENST00000504287 ST18O60284 1047 aa15.95■□□□□ 0.14
LINC02488-201ENST00000504287 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
LINC02488-201ENST00000504287 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
LINC02488-201ENST00000504287 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
LINC02488-201ENST00000504287 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
LINC02488-201ENST00000504287 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
LINC02488-201ENST00000504287 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
LINC02488-201ENST00000504287 GPR153Q6NV75 609 aa15.89■□□□□ 0.13
LINC02488-201ENST00000504287 ZNF710Q8N1W2 664 aa15.89■□□□□ 0.13
LINC02488-201ENST00000504287 HOXB1P14653 301 aaPredicted RBP15.86■□□□□ 0.13
LINC02488-201ENST00000504287 OXER1Q8TDS5 423 aa15.85■□□□□ 0.13
LINC02488-201ENST00000504287 PCDHGA4Q9Y5G9 962 aa15.84■□□□□ 0.13
LINC02488-201ENST00000504287 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.12
LINC02488-201ENST00000504287 WDR70Q9NW82 654 aa15.82■□□□□ 0.12
LINC02488-201ENST00000504287 ARSIQ5FYB1 569 aa15.81■□□□□ 0.12
LINC02488-201ENST00000504287 KDM4FA0A1W2PPD8 638 aa15.79■□□□□ 0.12
LINC02488-201ENST00000504287 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
LINC02488-201ENST00000504287 E2F4Q16254 413 aa15.78■□□□□ 0.12
LINC02488-201ENST00000504287 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC02488-201ENST00000504287 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
LINC02488-201ENST00000504287 UPF1Q92900 1129 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC02488-201ENST00000504287 MARVELD3Q96A59 401 aa15.75■□□□□ 0.11
LINC02488-201ENST00000504287 TBC1D12O60347 775 aa15.73■□□□□ 0.11
LINC02488-201ENST00000504287 ARIH1Q9Y4X5 557 aaPredicted RBP15.72■□□□□ 0.11
LINC02488-201ENST00000504287 NUDT7P0C024 238 aa15.71■□□□□ 0.11
LINC02488-201ENST00000504287 EMP3P54852 163 aa15.7■□□□□ 0.1
LINC02488-201ENST00000504287 POTEMA6NI47 508 aa15.68■□□□□ 0.1
LINC02488-201ENST00000504287 POTEGQ6S5H5 508 aa15.68■□□□□ 0.1
LINC02488-201ENST00000504287 DPYSL4O14531 572 aa15.66■□□□□ 0.1
LINC02488-201ENST00000504287 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
LINC02488-201ENST00000504287 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
LINC02488-201ENST00000504287 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
LINC02488-201ENST00000504287 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
LINC02488-201ENST00000504287 ZNF316A6NFI3 1004 aaPredicted RBP15.62■□□□□ 0.09
LINC02488-201ENST00000504287 EVI5O60447 810 aa15.62■□□□□ 0.09
LINC02488-201ENST00000504287 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
LINC02488-201ENST00000504287 LHX6Q9UPM6 363 aa15.61■□□□□ 0.09
LINC02488-201ENST00000504287 FAM205CA6NFA0 338 aa15.6■□□□□ 0.09
LINC02488-201ENST00000504287 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
LINC02488-201ENST00000504287 ARHGEF1Q92888 912 aaKnown RBP15.6■□□□□ 0.09
LINC02488-201ENST00000504287 ERBB3P21860 1342 aa15.6■□□□□ 0.09
LINC02488-201ENST00000504287 PDIA6Q15084 440 aa15.59■□□□□ 0.09
LINC02488-201ENST00000504287 HS3ST6Q96QI5 342 aa15.59■□□□□ 0.09
LINC02488-201ENST00000504287 VARS2Q5ST30 1063 aaKnown RBP15.56■□□□□ 0.08
LINC02488-201ENST00000504287 SPDYE16A6NNV3 312 aaPredicted RBP15.55■□□□□ 0.08
LINC02488-201ENST00000504287 PSDA5PKW4 1024 aaPredicted RBP15.52■□□□□ 0.08
LINC02488-201ENST00000504287 PTGER2P43116 358 aa15.51■□□□□ 0.07
LINC02488-201ENST00000504287 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
LINC02488-201ENST00000504287 FOSBP53539 338 aa15.49■□□□□ 0.07
LINC02488-201ENST00000504287 ZNF687Q8N1G0 1237 aa15.48■□□□□ 0.07
LINC02488-201ENST00000504287 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
LINC02488-201ENST00000504287 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
LINC02488-201ENST00000504287 ZNF454Q8N9F8 522 aa15.44■□□□□ 0.06
LINC02488-201ENST00000504287 PPP4R3BQ5MIZ7 849 aa15.43■□□□□ 0.06
LINC02488-201ENST00000504287 PCDH10Q9P2E7 1040 aa15.43■□□□□ 0.06
LINC02488-201ENST00000504287 PCDHGA10Q9Y5H3 936 aa15.43■□□□□ 0.06
LINC02488-201ENST00000504287 PHF14O94880 888 aa15.42■□□□□ 0.06
LINC02488-201ENST00000504287 POTEEQ6S8J3 1075 aa15.39■□□□□ 0.05
LINC02488-201ENST00000504287 DDX12PQ92771 950 aa15.39■□□□□ 0.05
LINC02488-201ENST00000504287 ZDHHC16Q969W1 377 aa15.37■□□□□ 0.05
LINC02488-201ENST00000504287 EPAS1Q99814 870 aa15.37■□□□□ 0.05
LINC02488-201ENST00000504287 KRTAP3-3Q9BYR6 98 aa15.37■□□□□ 0.05
LINC02488-201ENST00000504287 KRTAP3-2Q9BYR7 98 aa15.37■□□□□ 0.05
LINC02488-201ENST00000504287 TYW1BQ6NUM6 668 aa15.36■□□□□ 0.05
LINC02488-201ENST00000504287 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
LINC02488-201ENST00000504287 PBX2P40425 430 aa15.35■□□□□ 0.05
LINC02488-201ENST00000504287 SEMA3EO15041 775 aa15.34■□□□□ 0.05
LINC02488-201ENST00000504287 FBXW7Q969H0 707 aa15.34■□□□□ 0.05
LINC02488-201ENST00000504287 ADAM33Q9BZ11 813 aa15.34■□□□□ 0.05
LINC02488-201ENST00000504287 MLLT3P42568 568 aaPredicted RBP15.32■□□□□ 0.04
LINC02488-201ENST00000504287 GRXCR2A6NFK2 248 aa15.3■□□□□ 0.04
LINC02488-201ENST00000504287 OSBPP22059 807 aa15.3■□□□□ 0.04
LINC02488-201ENST00000504287 NBR1Q14596 966 aa15.3■□□□□ 0.04
LINC02488-201ENST00000504287 TESPA1A2RU30 521 aaPredicted RBP15.29■□□□□ 0.04
LINC02488-201ENST00000504287 ARHGAP33O14559 1287 aa15.29■□□□□ 0.04
LINC02488-201ENST00000504287 PRIM1P49642 420 aaKnown RBP15.29■□□□□ 0.04
LINC02488-201ENST00000504287 AXIN2Q9Y2T1 843 aa15.28■□□□□ 0.04
LINC02488-201ENST00000504287 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
LINC02488-201ENST00000504287 PSEN2P49810 448 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms