RNA–Protein interactions for RNA: ENST00000504189.1

LDB2-206, Transcript of LIM domain binding 2, humanhuman

TSL 3

Gene LDB2, Length 499 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-206ENST00000504189 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
LDB2-206ENST00000504189 ERICH6Q7L0X2 663 aa11.15□□□□□ -0.62
LDB2-206ENST00000504189 SOX12O15370 315 aa11.14□□□□□ -0.63
LDB2-206ENST00000504189 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
LDB2-206ENST00000504189 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
LDB2-206ENST00000504189 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
LDB2-206ENST00000504189 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
LDB2-206ENST00000504189 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
LDB2-206ENST00000504189 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
LDB2-206ENST00000504189 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
LDB2-206ENST00000504189 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
LDB2-206ENST00000504189 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
LDB2-206ENST00000504189 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
LDB2-206ENST00000504189 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
LDB2-206ENST00000504189 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
LDB2-206ENST00000504189 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
LDB2-206ENST00000504189 ERBB3P21860 1342 aa11.04□□□□□ -0.64
LDB2-206ENST00000504189 RIMBP2O15034 1052 aa11.03□□□□□ -0.64
LDB2-206ENST00000504189 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
LDB2-206ENST00000504189 NLRP6P59044 892 aa11.01□□□□□ -0.65
LDB2-206ENST00000504189 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
LDB2-206ENST00000504189 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
LDB2-206ENST00000504189 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
LDB2-206ENST00000504189 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
LDB2-206ENST00000504189 STK25O00506 426 aa10.97□□□□□ -0.65
LDB2-206ENST00000504189 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
LDB2-206ENST00000504189 HOMEZQ8IX15 550 aa10.97□□□□□ -0.65
LDB2-206ENST00000504189 MFRPQ9BY79 579 aa10.97□□□□□ -0.65
LDB2-206ENST00000504189 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
LDB2-206ENST00000504189 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.65
LDB2-206ENST00000504189 PKD2Q13563 968 aa10.93□□□□□ -0.66
LDB2-206ENST00000504189 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
LDB2-206ENST00000504189 RGL2O15211 777 aa10.92□□□□□ -0.66
LDB2-206ENST00000504189 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
LDB2-206ENST00000504189 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.67
LDB2-206ENST00000504189 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
LDB2-206ENST00000504189 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
LDB2-206ENST00000504189 KIF3CO14782 793 aa10.86□□□□□ -0.67
LDB2-206ENST00000504189 NBR1Q14596 966 aa10.85□□□□□ -0.67
LDB2-206ENST00000504189 CFAP44Q96MT7 982 aa10.85□□□□□ -0.67
LDB2-206ENST00000504189 ZNF316A6NFI3 1004 aaPredicted RBP10.82□□□□□ -0.68
LDB2-206ENST00000504189 PPP1R37O75864 691 aa10.8□□□□□ -0.68
LDB2-206ENST00000504189 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
LDB2-206ENST00000504189 NUDT7P0C024 238 aa10.78□□□□□ -0.68
LDB2-206ENST00000504189 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
LDB2-206ENST00000504189 TMEM132AQ24JP5 1023 aa10.77□□□□□ -0.69
LDB2-206ENST00000504189 ANKRD13DQ6ZTN6 518 aa10.77□□□□□ -0.69
LDB2-206ENST00000504189 TMC2Q8TDI7 906 aa10.77□□□□□ -0.69
LDB2-206ENST00000504189 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
LDB2-206ENST00000504189 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
LDB2-206ENST00000504189 SLC34A2O95436 690 aa10.73□□□□□ -0.69
LDB2-206ENST00000504189 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
LDB2-206ENST00000504189 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
LDB2-206ENST00000504189 LSM11P83369 360 aaKnown RBP eCLIP10.71□□□□□ -0.69
LDB2-206ENST00000504189 C14orf37Q86TY3 774 aa10.71□□□□□ -0.69
LDB2-206ENST00000504189 PTGER2P43116 358 aa10.68□□□□□ -0.7
LDB2-206ENST00000504189 POTEEQ6S8J3 1075 aa10.68□□□□□ -0.7
LDB2-206ENST00000504189 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
LDB2-206ENST00000504189 RANGAP1P46060 587 aaPredicted RBP10.67□□□□□ -0.7
LDB2-206ENST00000504189 HS6ST3Q8IZP7 471 aa10.66□□□□□ -0.7
LDB2-206ENST00000504189 PBX2P40425 430 aa10.65□□□□□ -0.7
LDB2-206ENST00000504189 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
LDB2-206ENST00000504189 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
LDB2-206ENST00000504189 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
LDB2-206ENST00000504189 PLPP6Q8IY26 295 aa10.61□□□□□ -0.71
LDB2-206ENST00000504189 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
LDB2-206ENST00000504189 FOXK1P85037 733 aa10.6□□□□□ -0.71
LDB2-206ENST00000504189 GPHNQ9NQX3 736 aaPredicted RBP10.6□□□□□ -0.71
LDB2-206ENST00000504189 DSG2Q14126 1118 aa10.59□□□□□ -0.71
LDB2-206ENST00000504189 ARHGAP33O14559 1287 aa10.57□□□□□ -0.72
LDB2-206ENST00000504189 NKX1-1Q15270 411 aaPredicted RBP10.56□□□□□ -0.72
LDB2-206ENST00000504189 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
LDB2-206ENST00000504189 ADGRD1Q6QNK2 874 aa10.54□□□□□ -0.72
LDB2-206ENST00000504189 PSEN2P49810 448 aa10.53□□□□□ -0.72
LDB2-206ENST00000504189 TBC1D12O60347 775 aa10.51□□□□□ -0.73
LDB2-206ENST00000504189 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
LDB2-206ENST00000504189 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
LDB2-206ENST00000504189 PPP4R3BQ5MIZ7 849 aa10.47□□□□□ -0.73
LDB2-206ENST00000504189 TK2O00142 265 aa10.46□□□□□ -0.73
LDB2-206ENST00000504189 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
LDB2-206ENST00000504189 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
LDB2-206ENST00000504189 HCSTQ9UBK5 93 aa10.46□□□□□ -0.73
LDB2-206ENST00000504189 HRO43593 1189 aa10.45□□□□□ -0.74
LDB2-206ENST00000504189 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
LDB2-206ENST00000504189 KCNK17Q96T54 332 aa10.44□□□□□ -0.74
LDB2-206ENST00000504189 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
LDB2-206ENST00000504189 PPP1R15BQ5SWA1 713 aa10.42□□□□□ -0.74
LDB2-206ENST00000504189 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
LDB2-206ENST00000504189 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
LDB2-206ENST00000504189 ZNF454Q8N9F8 522 aa10.4□□□□□ -0.74
LDB2-206ENST00000504189 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
LDB2-206ENST00000504189 PDE4AP27815 886 aa10.38□□□□□ -0.75
LDB2-206ENST00000504189 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
LDB2-206ENST00000504189 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
LDB2-206ENST00000504189 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
LDB2-206ENST00000504189 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
LDB2-206ENST00000504189 FOSBP53539 338 aa10.35□□□□□ -0.75
LDB2-206ENST00000504189 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
LDB2-206ENST00000504189 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
LDB2-206ENST00000504189 LARP6Q9BRS8 491 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms