RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 SLAIN1Q8ND83 568 aa7.95□□□□□ -1.14
ATXN3-208ENST00000504047 OTUD5Q96G74 571 aa7.93□□□□□ -1.14
ATXN3-208ENST00000504047 TSHZ2Q9NRE2 1034 aa7.93□□□□□ -1.14
ATXN3-208ENST00000504047 GPHNQ9NQX3 736 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-208ENST00000504047 CADPS2Q86UW7 1296 aa7.9□□□□□ -1.14
ATXN3-208ENST00000504047 C2orf72A6NCS6 295 aa7.89□□□□□ -1.15
ATXN3-208ENST00000504047 LARP6Q9BRS8 491 aaKnown RBP7.89□□□□□ -1.15
ATXN3-208ENST00000504047 CRISPLD2Q9H0B8 497 aa7.89□□□□□ -1.15
ATXN3-208ENST00000504047 WDR70Q9NW82 654 aa7.89□□□□□ -1.15
ATXN3-208ENST00000504047 KIF3CO14782 793 aa7.88□□□□□ -1.15
ATXN3-208ENST00000504047 TMEM92Q6UXU6 159 aa7.88□□□□□ -1.15
ATXN3-208ENST00000504047 DDX27Q96GQ7 796 aaKnown RBP7.88□□□□□ -1.15
ATXN3-208ENST00000504047 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
ATXN3-208ENST00000504047 SNPHO15079 494 aa7.87□□□□□ -1.15
ATXN3-208ENST00000504047 FOXK1P85037 733 aa7.87□□□□□ -1.15
ATXN3-208ENST00000504047 PPP1R15BQ5SWA1 713 aa7.85□□□□□ -1.15
ATXN3-208ENST00000504047 VSIG10Q8N0Z9 540 aa7.85□□□□□ -1.15
ATXN3-208ENST00000504047 DSG2Q14126 1118 aa7.84□□□□□ -1.15
ATXN3-208ENST00000504047 MFSD10Q14728 455 aa7.84□□□□□ -1.15
ATXN3-208ENST00000504047 DOK7Q18PE1 504 aa7.83□□□□□ -1.16
ATXN3-208ENST00000504047 PLPP6Q8IY26 295 aa7.83□□□□□ -1.16
ATXN3-208ENST00000504047 RIMBP2O15034 1052 aa7.82□□□□□ -1.16
ATXN3-208ENST00000504047 SLC24A1O60721 1099 aa7.82□□□□□ -1.16
ATXN3-208ENST00000504047 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
ATXN3-208ENST00000504047 SLC34A2O95436 690 aa7.78□□□□□ -1.16
ATXN3-208ENST00000504047 E2F4Q16254 413 aa7.78□□□□□ -1.16
ATXN3-208ENST00000504047 TBC1D12O60347 775 aa7.77□□□□□ -1.17
ATXN3-208ENST00000504047 P3H3Q8IVL6 736 aa7.77□□□□□ -1.17
ATXN3-208ENST00000504047 ZSWIM6Q9HCJ5 1215 aa7.77□□□□□ -1.17
ATXN3-208ENST00000504047 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
ATXN3-208ENST00000504047 HOXB3P14651 431 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-208ENST00000504047 CAMK2BQ13554 666 aa7.75□□□□□ -1.17
ATXN3-208ENST00000504047 PTCD2Q8WV60 388 aaKnown RBP7.74□□□□□ -1.17
ATXN3-208ENST00000504047 MAP3K9P80192 1104 aa7.73□□□□□ -1.17
ATXN3-208ENST00000504047 UPF1Q92900 1129 aaKnown RBP eCLIP7.73□□□□□ -1.17
ATXN3-208ENST00000504047 FAM163AQ96GL9 167 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-208ENST00000504047 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-208ENST00000504047 PCDHGA4Q9Y5G9 962 aa7.72□□□□□ -1.17
ATXN3-208ENST00000504047 OXER1Q8TDS5 423 aa7.71□□□□□ -1.18
ATXN3-208ENST00000504047 ST18O60284 1047 aa7.7□□□□□ -1.18
ATXN3-208ENST00000504047 ARSIQ5FYB1 569 aa7.7□□□□□ -1.18
ATXN3-208ENST00000504047 EMILIN3Q9NT22 766 aa7.7□□□□□ -1.18
ATXN3-208ENST00000504047 HOXB1P14653 301 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-208ENST00000504047 ARHGEF1Q92888 912 aaKnown RBP7.69□□□□□ -1.18
ATXN3-208ENST00000504047 DPYSL4O14531 572 aa7.68□□□□□ -1.18
ATXN3-208ENST00000504047 GPR153Q6NV75 609 aa7.68□□□□□ -1.18
ATXN3-208ENST00000504047 KCNV2Q8TDN2 545 aa7.68□□□□□ -1.18
ATXN3-208ENST00000504047 ARIH1Q9Y4X5 557 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-208ENST00000504047 SPDYE16A6NNV3 312 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-208ENST00000504047 EVI5O60447 810 aa7.66□□□□□ -1.18
ATXN3-208ENST00000504047 NUDT7P0C024 238 aa7.66□□□□□ -1.18
ATXN3-208ENST00000504047 EMP3P54852 163 aa7.65□□□□□ -1.18
ATXN3-208ENST00000504047 KHSRPQ92945 711 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-208ENST00000504047 PDIA6Q15084 440 aa7.63□□□□□ -1.19
ATXN3-208ENST00000504047 ERBB3P21860 1342 aa7.62□□□□□ -1.19
ATXN3-208ENST00000504047 PSDA5PKW4 1024 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-208ENST00000504047 MARVELD3Q96A59 401 aa7.62□□□□□ -1.19
ATXN3-208ENST00000504047 ANO8Q9HCE9 1232 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-208ENST00000504047 LHX6Q9UPM6 363 aa7.6□□□□□ -1.19
ATXN3-208ENST00000504047 KDM4FA0A1W2PPD8 638 aa7.59□□□□□ -1.19
ATXN3-208ENST00000504047 NBR1Q14596 966 aa7.59□□□□□ -1.19
ATXN3-208ENST00000504047 LCE2DQ5TA82 110 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-208ENST00000504047 FAM205CA6NFA0 338 aa7.58□□□□□ -1.2
ATXN3-208ENST00000504047 PTGER2P43116 358 aa7.58□□□□□ -1.2
ATXN3-208ENST00000504047 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
ATXN3-208ENST00000504047 VARS2Q5ST30 1063 aaKnown RBP7.57□□□□□ -1.2
ATXN3-208ENST00000504047 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
ATXN3-208ENST00000504047 JPH4Q96JJ6 628 aa7.57□□□□□ -1.2
ATXN3-208ENST00000504047 PHF14O94880 888 aa7.56□□□□□ -1.2
ATXN3-208ENST00000504047 SMYD5Q6GMV2 418 aa7.56□□□□□ -1.2
ATXN3-208ENST00000504047 TULP1O00294 542 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-208ENST00000504047 POTEGQ6S5H5 508 aa7.55□□□□□ -1.2
ATXN3-208ENST00000504047 DDX12PQ92771 950 aa7.55□□□□□ -1.2
ATXN3-208ENST00000504047 HS3ST6Q96QI5 342 aa7.55□□□□□ -1.2
ATXN3-208ENST00000504047 GRXCR2A6NFK2 248 aa7.54□□□□□ -1.2
ATXN3-208ENST00000504047 POTEMA6NI47 508 aa7.54□□□□□ -1.2
ATXN3-208ENST00000504047 SEMA3EO15041 775 aa7.54□□□□□ -1.2
ATXN3-208ENST00000504047 FOSBP53539 338 aa7.54□□□□□ -1.2
ATXN3-208ENST00000504047 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
ATXN3-208ENST00000504047 EPAS1Q99814 870 aa7.54□□□□□ -1.2
ATXN3-208ENST00000504047 TYW1BQ6NUM6 668 aa7.53□□□□□ -1.2
ATXN3-208ENST00000504047 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
ATXN3-208ENST00000504047 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
ATXN3-208ENST00000504047 BCANQ96GW7 911 aa7.52□□□□□ -1.21
ATXN3-208ENST00000504047 PCDHGA10Q9Y5H3 936 aa7.52□□□□□ -1.21
ATXN3-208ENST00000504047 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-208ENST00000504047 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
ATXN3-208ENST00000504047 MLLT3P42568 568 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-208ENST00000504047 MAP3K7O43318 606 aa7.48□□□□□ -1.21
ATXN3-208ENST00000504047 PTPREP23469 700 aa7.48□□□□□ -1.21
ATXN3-208ENST00000504047 PBX2P40425 430 aa7.48□□□□□ -1.21
ATXN3-208ENST00000504047 EN1Q05925 392 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-208ENST00000504047 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
ATXN3-208ENST00000504047 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
ATXN3-208ENST00000504047 POTEB3A0JP26 581 aa7.47□□□□□ -1.21
ATXN3-208ENST00000504047 OSBPP22059 807 aa7.47□□□□□ -1.21
ATXN3-208ENST00000504047 POTEBQ6S5H4 581 aa7.47□□□□□ -1.21
ATXN3-208ENST00000504047 ARHGAP33O14559 1287 aa7.46□□□□□ -1.22
ATXN3-208ENST00000504047 CDAN1Q8IWY9 1227 aa7.46□□□□□ -1.22
ATXN3-208ENST00000504047 ADAM33Q9BZ11 813 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms