RNA–Protein interactions for RNA: ENST00000503871.1

SPDL1-203, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 369 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-203ENST00000503871 NKX1-1Q15270 411 aaPredicted RBP14.31□□□□□ -0.12
SPDL1-203ENST00000503871 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
SPDL1-203ENST00000503871 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
SPDL1-203ENST00000503871 KIF3CO14782 793 aa14.23□□□□□ -0.13
SPDL1-203ENST00000503871 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
SPDL1-203ENST00000503871 BBXQ8WY36 941 aaPredicted RBP14.22□□□□□ -0.13
SPDL1-203ENST00000503871 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
SPDL1-203ENST00000503871 C2orf72A6NCS6 295 aa14.21□□□□□ -0.13
SPDL1-203ENST00000503871 EMP3P54852 163 aa14.21□□□□□ -0.13
SPDL1-203ENST00000503871 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
SPDL1-203ENST00000503871 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
SPDL1-203ENST00000503871 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
SPDL1-203ENST00000503871 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
SPDL1-203ENST00000503871 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
SPDL1-203ENST00000503871 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
SPDL1-203ENST00000503871 GTPBP6O43824 516 aaPredicted RBP14.13□□□□□ -0.15
SPDL1-203ENST00000503871 HS3ST6Q96QI5 342 aa14.13□□□□□ -0.15
SPDL1-203ENST00000503871 GPR153Q6NV75 609 aa14.12□□□□□ -0.15
SPDL1-203ENST00000503871 TMC2Q8TDI7 906 aa14.11□□□□□ -0.15
SPDL1-203ENST00000503871 RIMBP2O15034 1052 aa14.1□□□□□ -0.15
SPDL1-203ENST00000503871 KHSRPQ92945 711 aaKnown RBP eCLIP14.08□□□□□ -0.16
SPDL1-203ENST00000503871 ZSWIM6Q9HCJ5 1215 aa14.08□□□□□ -0.16
SPDL1-203ENST00000503871 ARSIQ5FYB1 569 aa14.07□□□□□ -0.16
SPDL1-203ENST00000503871 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
SPDL1-203ENST00000503871 ERBB3P21860 1342 aa14.02□□□□□ -0.17
SPDL1-203ENST00000503871 KRTAP3-3Q9BYR6 98 aa14.01□□□□□ -0.17
SPDL1-203ENST00000503871 KRTAP3-2Q9BYR7 98 aa14.01□□□□□ -0.17
SPDL1-203ENST00000503871 GPHNQ9NQX3 736 aaPredicted RBP14□□□□□ -0.17
SPDL1-203ENST00000503871 VARS2Q5ST30 1063 aaKnown RBP13.99□□□□□ -0.17
SPDL1-203ENST00000503871 SLC34A2O95436 690 aa13.97□□□□□ -0.17
SPDL1-203ENST00000503871 FOXK1P85037 733 aa13.97□□□□□ -0.17
SPDL1-203ENST00000503871 DSG2Q14126 1118 aa13.97□□□□□ -0.17
SPDL1-203ENST00000503871 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
SPDL1-203ENST00000503871 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
SPDL1-203ENST00000503871 PCDHGA4Q9Y5G9 962 aa13.96□□□□□ -0.17
SPDL1-203ENST00000503871 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
SPDL1-203ENST00000503871 NUDT7P0C024 238 aa13.94□□□□□ -0.18
SPDL1-203ENST00000503871 PDE4AP27815 886 aa13.94□□□□□ -0.18
SPDL1-203ENST00000503871 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
SPDL1-203ENST00000503871 NCKAP5LQ9HCH0 1330 aa13.92□□□□□ -0.18
SPDL1-203ENST00000503871 SPNS2Q8IVW8 549 aa13.91□□□□□ -0.18
SPDL1-203ENST00000503871 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
SPDL1-203ENST00000503871 PTCD2Q8WV60 388 aaKnown RBP13.87□□□□□ -0.19
SPDL1-203ENST00000503871 LHX6Q9UPM6 363 aa13.86□□□□□ -0.19
SPDL1-203ENST00000503871 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
SPDL1-203ENST00000503871 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
SPDL1-203ENST00000503871 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
SPDL1-203ENST00000503871 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
SPDL1-203ENST00000503871 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.2
SPDL1-203ENST00000503871 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
SPDL1-203ENST00000503871 DDX27Q96GQ7 796 aaKnown RBP13.82□□□□□ -0.2
SPDL1-203ENST00000503871 TBC1D12O60347 775 aa13.8□□□□□ -0.2
SPDL1-203ENST00000503871 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
SPDL1-203ENST00000503871 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPDL1-203ENST00000503871 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
SPDL1-203ENST00000503871 MFSD10Q14728 455 aa13.75□□□□□ -0.21
SPDL1-203ENST00000503871 WDR70Q9NW82 654 aa13.7□□□□□ -0.22
SPDL1-203ENST00000503871 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
SPDL1-203ENST00000503871 PLCB2Q00722 1185 aa13.67□□□□□ -0.22
SPDL1-203ENST00000503871 EMILIN3Q9NT22 766 aa13.66□□□□□ -0.22
SPDL1-203ENST00000503871 LSM11P83369 360 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPDL1-203ENST00000503871 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
SPDL1-203ENST00000503871 PSDA5PKW4 1024 aaPredicted RBP13.63□□□□□ -0.23
SPDL1-203ENST00000503871 PBX2P40425 430 aa13.62□□□□□ -0.23
SPDL1-203ENST00000503871 MAP3K9P80192 1104 aa13.62□□□□□ -0.23
SPDL1-203ENST00000503871 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
SPDL1-203ENST00000503871 EVI5O60447 810 aa13.58□□□□□ -0.24
SPDL1-203ENST00000503871 PSEN2P49810 448 aa13.57□□□□□ -0.24
SPDL1-203ENST00000503871 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
SPDL1-203ENST00000503871 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
SPDL1-203ENST00000503871 ARHGAP33O14559 1287 aa13.56□□□□□ -0.24
SPDL1-203ENST00000503871 DMRTA1Q5VZB9 504 aa13.56□□□□□ -0.24
SPDL1-203ENST00000503871 CAMK2BQ13554 666 aa13.55□□□□□ -0.24
SPDL1-203ENST00000503871 E2F4Q16254 413 aa13.55□□□□□ -0.24
SPDL1-203ENST00000503871 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
SPDL1-203ENST00000503871 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
SPDL1-203ENST00000503871 FOSBP53539 338 aa13.53□□□□□ -0.24
SPDL1-203ENST00000503871 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
SPDL1-203ENST00000503871 HAP1P54257 671 aaPredicted RBP13.5□□□□□ -0.25
SPDL1-203ENST00000503871 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
SPDL1-203ENST00000503871 ADGRD1Q6QNK2 874 aa13.48□□□□□ -0.25
SPDL1-203ENST00000503871 DPYSL4O14531 572 aa13.47□□□□□ -0.25
SPDL1-203ENST00000503871 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
SPDL1-203ENST00000503871 KCNH8Q96L42 1107 aa13.47□□□□□ -0.25
SPDL1-203ENST00000503871 PTGER2P43116 358 aa13.46□□□□□ -0.25
SPDL1-203ENST00000503871 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
SPDL1-203ENST00000503871 ADAM33Q9BZ11 813 aa13.44□□□□□ -0.26
SPDL1-203ENST00000503871 PCDHGA10Q9Y5H3 936 aa13.43□□□□□ -0.26
SPDL1-203ENST00000503871 HRO43593 1189 aa13.42□□□□□ -0.26
SPDL1-203ENST00000503871 SPDYE16A6NNV3 312 aaPredicted RBP13.41□□□□□ -0.26
SPDL1-203ENST00000503871 TK2O00142 265 aa13.41□□□□□ -0.26
SPDL1-203ENST00000503871 ZDHHC16Q969W1 377 aa13.41□□□□□ -0.26
SPDL1-203ENST00000503871 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
SPDL1-203ENST00000503871 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
SPDL1-203ENST00000503871 PTPREP23469 700 aa13.37□□□□□ -0.27
SPDL1-203ENST00000503871 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
SPDL1-203ENST00000503871 PDIA6Q15084 440 aa13.36□□□□□ -0.27
SPDL1-203ENST00000503871 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
SPDL1-203ENST00000503871 PHF14O94880 888 aa13.34□□□□□ -0.27
SPDL1-203ENST00000503871 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms