RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 ADAMTSL3P82987 1691 aa31.48■■■□□ 2.63
UBE2D3-215ENST00000503418 ARHGAP5Q13017 1502 aa31.48■■■□□ 2.63
UBE2D3-215ENST00000503418 BCORL1Q5H9F3 1711 aa31.47■■■□□ 2.63
UBE2D3-215ENST00000503418 POGZQ7Z3K3 1410 aa31.47■■■□□ 2.63
UBE2D3-215ENST00000503418 ZFYVE16Q7Z3T8 1539 aa31.46■■■□□ 2.63
UBE2D3-215ENST00000503418 YEATS2Q9ULM3 1422 aa31.43■■■□□ 2.62
UBE2D3-215ENST00000503418 HECW2Q9P2P5 1572 aa31.43■■■□□ 2.62
UBE2D3-215ENST00000503418 MAGI2Q86UL8 1455 aa31.41■■■□□ 2.62
UBE2D3-215ENST00000503418 CDC42BPBQ9Y5S2 1711 aa31.41■■■□□ 2.62
UBE2D3-215ENST00000503418 MADDQ8WXG6 1647 aa31.39■■■□□ 2.62
UBE2D3-215ENST00000503418 PTPRMP28827 1452 aa31.38■■■□□ 2.61
UBE2D3-215ENST00000503418 PREX2Q70Z35 1606 aa31.37■■■□□ 2.61
UBE2D3-215ENST00000503418 SIGLEC1Q9BZZ2 1709 aa31.34■■■□□ 2.61
UBE2D3-215ENST00000503418 ZNF518AQ6AHZ1 1483 aa31.33■■■□□ 2.61
UBE2D3-215ENST00000503418 CDC42BPAQ5VT25 1732 aa31.31■■■□□ 2.6
UBE2D3-215ENST00000503418 RIMS1Q86UR5 1692 aaKnown RBP31.31■■■□□ 2.6
UBE2D3-215ENST00000503418 CEP162Q5TB80 1403 aa31.3■■■□□ 2.6
UBE2D3-215ENST00000503418 KDM5CP41229 1560 aa31.27■■■□□ 2.6
UBE2D3-215ENST00000503418 AFAP1Q8N556 730 aa31.27■■■□□ 2.6
UBE2D3-215ENST00000503418 MYT1LQ9UL68 1186 aa31.26■■■□□ 2.59
UBE2D3-215ENST00000503418 ATP10AO60312 1499 aa31.26■■■□□ 2.59
UBE2D3-215ENST00000503418 ABCC1P33527 1531 aa31.25■■■□□ 2.59
UBE2D3-215ENST00000503418 C9orf84Q5VXU9 1444 aa31.24■■■□□ 2.59
UBE2D3-215ENST00000503418 ITSN2Q9NZM3 1697 aa31.23■■■□□ 2.59
UBE2D3-215ENST00000503418 MLECQ14165 292 aa31.23■■■□□ 2.59
UBE2D3-215ENST00000503418 MTUS2Q5JR59 1369 aa31.2■■■□□ 2.59
UBE2D3-215ENST00000503418 ARHGEF12Q9NZN5 1544 aa31.2■■■□□ 2.59
UBE2D3-215ENST00000503418 FER1L4A9Z1Z3 1794 aa31.18■■■□□ 2.58
UBE2D3-215ENST00000503418 TRAPPC8Q9Y2L5 1435 aa31.18■■■□□ 2.58
UBE2D3-215ENST00000503418 ZNF777Q9ULD5 760 aaPredicted RBP31.18■■■□□ 2.58
UBE2D3-215ENST00000503418 GPATCH8Q9UKJ3 1502 aaKnown RBP31.16■■■□□ 2.58
UBE2D3-215ENST00000503418 PLPPR3Q6T4P5 718 aa31.16■■■□□ 2.58
UBE2D3-215ENST00000503418 DIP2CQ9Y2E4 1556 aa31.16■■■□□ 2.58
UBE2D3-215ENST00000503418 SAMD9LQ8IVG5 1584 aa31.14■■■□□ 2.58
UBE2D3-215ENST00000503418 MLH3Q9UHC1 1453 aa31.14■■■□□ 2.57
UBE2D3-215ENST00000503418 ABCA6Q8N139 1617 aa31.13■■■□□ 2.57
UBE2D3-215ENST00000503418 CCNB3Q8WWL7 1395 aa31.13■■■□□ 2.57
UBE2D3-215ENST00000503418 LOC105371045A0A1W2PR82 267 aa31.12■■■□□ 2.57
UBE2D3-215ENST00000503418 EHBP1L1Q8N3D4 1523 aa31.1■■■□□ 2.57
UBE2D3-215ENST00000503418 SYCP2Q9BX26 1530 aa31.1■■■□□ 2.57
UBE2D3-215ENST00000503418 CFDP1Q9UEE9 299 aaPredicted RBP31.08■■■□□ 2.57
UBE2D3-215ENST00000503418 KIDINS220Q9ULH0 1771 aa31.07■■■□□ 2.56
UBE2D3-215ENST00000503418 REREQ9P2R6 1566 aa31.06■■■□□ 2.56
UBE2D3-215ENST00000503418 LMTK3Q96Q04 1460 aa31.03■■■□□ 2.56
UBE2D3-215ENST00000503418 HNRNPMP52272 730 aaKnown RBP eCLIP31.03■■■□□ 2.564e-13■■■■■ 32.7
UBE2D3-215ENST00000503418 TIAM1Q13009 1591 aa31.03■■■□□ 2.56
UBE2D3-215ENST00000503418 PLEKHH2Q8IVE3 1493 aa31.01■■■□□ 2.56
UBE2D3-215ENST00000503418 KIAA1107Q9UPP5 1409 aa30.98■■■□□ 2.55
UBE2D3-215ENST00000503418 SPAG9O60271 1321 aaKnown RBP30.98■■■□□ 2.55
UBE2D3-215ENST00000503418 AGLP35573 1532 aa30.96■■■□□ 2.55
UBE2D3-215ENST00000503418 VPS8Q8N3P4 1428 aa30.95■■■□□ 2.54
UBE2D3-215ENST00000503418 SUPT6HQ7KZ85 1726 aaKnown RBP30.94■■■□□ 2.54
UBE2D3-215ENST00000503418 ATP7AQ04656 1500 aa30.93■■■□□ 2.54
UBE2D3-215ENST00000503418 CEBPAP49715 358 aaPredicted RBP30.92■■■□□ 2.54
UBE2D3-215ENST00000503418 ZNF644Q9H582 1327 aaPredicted RBP30.91■■■□□ 2.54
UBE2D3-215ENST00000503418 INO80Q9ULG1 1556 aaPredicted RBP30.9■■■□□ 2.54
UBE2D3-215ENST00000503418 NCOA2Q15596 1464 aa30.89■■■□□ 2.54
UBE2D3-215ENST00000503418 HSPA2P54652 639 aa30.89■■■□□ 2.54
UBE2D3-215ENST00000503418 ESF1Q9H501 851 aaKnown RBP30.88■■■□□ 2.53
UBE2D3-215ENST00000503418 PREX1Q8TCU6 1659 aa30.85■■■□□ 2.53
UBE2D3-215ENST00000503418 ILDR1Q86SU0 546 aaPredicted RBP30.83■■■□□ 2.53
UBE2D3-215ENST00000503418 C3P01024 1663 aa30.83■■■□□ 2.53
UBE2D3-215ENST00000503418 MBD5Q9P267 1494 aa30.82■■■□□ 2.52
UBE2D3-215ENST00000503418 A2MP01023 1474 aa30.8■■■□□ 2.52
UBE2D3-215ENST00000503418 LRRC9Q6ZRR7 1453 aa30.8■■■□□ 2.52
UBE2D3-215ENST00000503418 PLXNC1O60486 1568 aa30.79■■■□□ 2.52
UBE2D3-215ENST00000503418 CAMSAP2Q08AD1 1489 aa30.78■■■□□ 2.52
UBE2D3-215ENST00000503418 ADGBQ8N7X0 1667 aa30.78■■■□□ 2.52
UBE2D3-215ENST00000503418 CNTLNQ9NXG0 1405 aa30.76■■■□□ 2.51
UBE2D3-215ENST00000503418 SETD1BQ9UPS6 1966 aaKnown RBP30.75■■■□□ 2.51
UBE2D3-215ENST00000503418 UHRF1BP1Q6BDS2 1440 aa30.73■■■□□ 2.51
UBE2D3-215ENST00000503418 CCDC141Q6ZP82 1450 aa30.73■■■□□ 2.51
UBE2D3-215ENST00000503418 MAP3K1Q13233 1512 aa30.73■■■□□ 2.51
UBE2D3-215ENST00000503418 RTEL1-TNFRSF6BF6WH68 1400 aa30.71■■■□□ 2.51
UBE2D3-215ENST00000503418 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.51
UBE2D3-215ENST00000503418 MROH2AA6NES4 1674 aa30.7■■■□□ 2.5
UBE2D3-215ENST00000503418 CLTCQ00610 1675 aaKnown RBP30.68■■■□□ 2.5
UBE2D3-215ENST00000503418 GGT6Q6P531 493 aa30.67■■■□□ 2.5
UBE2D3-215ENST00000503418 RSPH4AQ5TD94 716 aa30.65■■■□□ 2.5
UBE2D3-215ENST00000503418 ARHGEF5Q12774 1597 aa30.63■■■□□ 2.49
UBE2D3-215ENST00000503418 ZMYM3Q14202 1370 aa30.63■■■□□ 2.49
UBE2D3-215ENST00000503418 DHX29Q7Z478 1369 aaKnown RBP30.61■■■□□ 2.49
UBE2D3-215ENST00000503418 APLP2Q06481 763 aa30.6■■■□□ 2.49
UBE2D3-215ENST00000503418 MYOM3Q5VTT5 1437 aa30.58■■■□□ 2.49
UBE2D3-215ENST00000503418 TSPY4P0CV99 314 aa30.58■■■□□ 2.49
UBE2D3-215ENST00000503418 TSPY10P0CW01 314 aa30.58■■■□□ 2.49
UBE2D3-215ENST00000503418 STRCQ7RTU9 1775 aa30.57■■■□□ 2.48
UBE2D3-215ENST00000503418 NPATQ14207 1427 aa30.56■■■□□ 2.48
UBE2D3-215ENST00000503418 MIA2Q96PC5 1412 aa30.54■■■□□ 2.48
UBE2D3-215ENST00000503418 KIF3BO15066 747 aa30.53■■■□□ 2.48
UBE2D3-215ENST00000503418 PPP6R1Q9UPN7 881 aa30.53■■■□□ 2.48
UBE2D3-215ENST00000503418 FBXO41Q8TF61 875 aa30.51■■■□□ 2.47
UBE2D3-215ENST00000503418 MAST1Q9Y2H9 1570 aa30.49■■■□□ 2.47
UBE2D3-215ENST00000503418 PTPRKQ15262 1439 aa30.48■■■□□ 2.47
UBE2D3-215ENST00000503418 DMRT2Q9Y5R5 561 aa30.48■■■□□ 2.47
UBE2D3-215ENST00000503418 MYO3AQ8NEV4 1616 aa30.47■■■□□ 2.47
UBE2D3-215ENST00000503418 KDM5DQ9BY66 1539 aa30.43■■■□□ 2.46
UBE2D3-215ENST00000503418 CAMSAP1Q5T5Y3 1602 aa30.42■■■□□ 2.46
UBE2D3-215ENST00000503418 ZNF142P52746 1687 aaPredicted RBP30.42■■■□□ 2.46
UBE2D3-215ENST00000503418 PTPN23Q9H3S7 1636 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms