RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MLLT3P42568 568 aaPredicted RBP10.6□□□□□ -0.71
HMGB1P3-201ENST00000502802 BMP2KQ9NSY1 1161 aaPredicted RBP10.59□□□□□ -0.71
HMGB1P3-201ENST00000502802 RBM26Q5T8P6 1007 aaKnown RBP10.58□□□□□ -0.72
HMGB1P3-201ENST00000502802 GPIHBP1Q8IV16 184 aa10.58□□□□□ -0.72
HMGB1P3-201ENST00000502802 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
HMGB1P3-201ENST00000502802 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P3-201ENST00000502802 AK7Q96M32 723 aa10.56□□□□□ -0.72
HMGB1P3-201ENST00000502802 DPYSL4O14531 572 aa10.55□□□□□ -0.72
HMGB1P3-201ENST00000502802 DSG2Q14126 1118 aa10.55□□□□□ -0.72
HMGB1P3-201ENST00000502802 EMILIN3Q9NT22 766 aa10.55□□□□□ -0.72
HMGB1P3-201ENST00000502802 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
HMGB1P3-201ENST00000502802 PDIA6Q15084 440 aa10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 MICALL2Q8IY33 904 aa10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 FOXK1P85037 733 aa10.52□□□□□ -0.73
HMGB1P3-201ENST00000502802 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P3-201ENST00000502802 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P3-201ENST00000502802 CLCN6P51797 869 aa10.48□□□□□ -0.73
HMGB1P3-201ENST00000502802 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
HMGB1P3-201ENST00000502802 PLPP6Q8IY26 295 aa10.46□□□□□ -0.73
HMGB1P3-201ENST00000502802 ARXQ96QS3 562 aa10.46□□□□□ -0.73
HMGB1P3-201ENST00000502802 TMEM121BQ9BXQ6 578 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P3-201ENST00000502802 BOLA1Q9Y3E2 137 aa10.45□□□□□ -0.74
HMGB1P3-201ENST00000502802 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 GPBP1L1Q9HC44 474 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 C2orf72A6NCS6 295 aa10.43□□□□□ -0.74
HMGB1P3-201ENST00000502802 G3V3G9 751 aa10.43□□□□□ -0.74
HMGB1P3-201ENST00000502802 TRIM66O15016 1216 aa10.43□□□□□ -0.74
HMGB1P3-201ENST00000502802 KIF3CO14782 793 aa10.42□□□□□ -0.74
HMGB1P3-201ENST00000502802 IER5LQ5T953 404 aa10.42□□□□□ -0.74
HMGB1P3-201ENST00000502802 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
HMGB1P3-201ENST00000502802 PDE4DQ08499 809 aa10.41□□□□□ -0.74
HMGB1P3-201ENST00000502802 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
HMGB1P3-201ENST00000502802 GPR37O15354 613 aa10.4□□□□□ -0.74
HMGB1P3-201ENST00000502802 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P3-201ENST00000502802 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
HMGB1P3-201ENST00000502802 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
HMGB1P3-201ENST00000502802 HAX1O00165 279 aa10.38□□□□□ -0.75
HMGB1P3-201ENST00000502802 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P3-201ENST00000502802 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
HMGB1P3-201ENST00000502802 PLCG2P16885 1265 aa10.36□□□□□ -0.75
HMGB1P3-201ENST00000502802 NUTM2FA1L443 756 aa10.35□□□□□ -0.75
HMGB1P3-201ENST00000502802 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P3-201ENST00000502802 EVX2Q03828 476 aa10.34□□□□□ -0.75
HMGB1P3-201ENST00000502802 OSBPP22059 807 aa10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 PTGER2P43116 358 aa10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 MAP2K5Q13163 448 aa10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
HMGB1P3-201ENST00000502802 IRF6O14896 467 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 TBC1D12O60347 775 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 HOMEZQ8IX15 550 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
HMGB1P3-201ENST00000502802 GNPATO15228 680 aa10.29□□□□□ -0.76
HMGB1P3-201ENST00000502802 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
HMGB1P3-201ENST00000502802 FCHSD2O94868 740 aa10.28□□□□□ -0.76
HMGB1P3-201ENST00000502802 HIC1Q14526 733 aa10.28□□□□□ -0.76
HMGB1P3-201ENST00000502802 DDX12PQ92771 950 aa10.28□□□□□ -0.76
HMGB1P3-201ENST00000502802 AMHR2Q16671 573 aa10.27□□□□□ -0.77
HMGB1P3-201ENST00000502802 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
HMGB1P3-201ENST00000502802 EVI5O60447 810 aa10.25□□□□□ -0.77
HMGB1P3-201ENST00000502802 SEC24BO95487 1268 aa10.25□□□□□ -0.77
HMGB1P3-201ENST00000502802 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
HMGB1P3-201ENST00000502802 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P3-201ENST00000502802 FECHP22830 423 aa10.23□□□□□ -0.77
HMGB1P3-201ENST00000502802 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
HMGB1P3-201ENST00000502802 PRIM1P49642 420 aaKnown RBP10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 PTGDRQ13258 359 aa10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 ZMYND15Q9H091 742 aa10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
HMGB1P3-201ENST00000502802 PTCD2Q8WV60 388 aaKnown RBP10.2□□□□□ -0.78
HMGB1P3-201ENST00000502802 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
HMGB1P3-201ENST00000502802 GABBR2O75899 941 aa10.18□□□□□ -0.78
HMGB1P3-201ENST00000502802 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
HMGB1P3-201ENST00000502802 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P3-201ENST00000502802 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
HMGB1P3-201ENST00000502802 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P3-201ENST00000502802 SLC34A2O95436 690 aa10.15□□□□□ -0.78
HMGB1P3-201ENST00000502802 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 EPAS1Q99814 870 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 GOPCQ9HD26 462 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
HMGB1P3-201ENST00000502802 PHF14O94880 888 aa10.13□□□□□ -0.79
HMGB1P3-201ENST00000502802 C7P10643 843 aa10.13□□□□□ -0.79
HMGB1P3-201ENST00000502802 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P3-201ENST00000502802 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
HMGB1P3-201ENST00000502802 CDHR5Q9HBB8 845 aa10.1□□□□□ -0.79
HMGB1P3-201ENST00000502802 NPDC1Q9NQX5 325 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P3-201ENST00000502802 MAP3K7O43318 606 aa10.09□□□□□ -0.79
HMGB1P3-201ENST00000502802 MS4A1P11836 297 aa10.09□□□□□ -0.79
HMGB1P3-201ENST00000502802 FLIIQ13045 1269 aa10.08□□□□□ -0.8
HMGB1P3-201ENST00000502802 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
HMGB1P3-201ENST00000502802 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
HMGB1P3-201ENST00000502802 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms