RNA–Protein interactions for RNA: ENST00000502780.2

TRAV31-201, Transcript of T cell receptor alpha variable 31 (pseudogene), humanhuman

BASIC

Gene TRAV31, Length 342 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV31-201ENST00000502780 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
TRAV31-201ENST00000502780 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
TRAV31-201ENST00000502780 TMC2Q8TDI7 906 aa13.73□□□□□ -0.21
TRAV31-201ENST00000502780 KIF3CO14782 793 aa13.71□□□□□ -0.21
TRAV31-201ENST00000502780 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
TRAV31-201ENST00000502780 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
TRAV31-201ENST00000502780 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
TRAV31-201ENST00000502780 SNPHO15079 494 aa13.64□□□□□ -0.23
TRAV31-201ENST00000502780 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
TRAV31-201ENST00000502780 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
TRAV31-201ENST00000502780 DSG2Q14126 1118 aa13.63□□□□□ -0.23
TRAV31-201ENST00000502780 LCE2DQ5TA82 110 aaPredicted RBP13.63□□□□□ -0.23
TRAV31-201ENST00000502780 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
TRAV31-201ENST00000502780 ST18O60284 1047 aa13.62□□□□□ -0.23
TRAV31-201ENST00000502780 PDE4AP27815 886 aa13.62□□□□□ -0.23
TRAV31-201ENST00000502780 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
TRAV31-201ENST00000502780 PLPP6Q8IY26 295 aa13.6□□□□□ -0.23
TRAV31-201ENST00000502780 FOXK1P85037 733 aa13.58□□□□□ -0.24
TRAV31-201ENST00000502780 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
TRAV31-201ENST00000502780 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
TRAV31-201ENST00000502780 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
TRAV31-201ENST00000502780 MARVELD3Q96A59 401 aa13.53□□□□□ -0.24
TRAV31-201ENST00000502780 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
TRAV31-201ENST00000502780 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRAV31-201ENST00000502780 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
TRAV31-201ENST00000502780 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
TRAV31-201ENST00000502780 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
TRAV31-201ENST00000502780 MFSD10Q14728 455 aa13.49□□□□□ -0.25
TRAV31-201ENST00000502780 GPR153Q6NV75 609 aa13.47□□□□□ -0.25
TRAV31-201ENST00000502780 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAV31-201ENST00000502780 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
TRAV31-201ENST00000502780 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
TRAV31-201ENST00000502780 POTEMA6NI47 508 aa13.44□□□□□ -0.26
TRAV31-201ENST00000502780 SLC34A2O95436 690 aa13.44□□□□□ -0.26
TRAV31-201ENST00000502780 HOXB1P14653 301 aaPredicted RBP13.44□□□□□ -0.26
TRAV31-201ENST00000502780 EMP3P54852 163 aa13.42□□□□□ -0.26
TRAV31-201ENST00000502780 ZSWIM6Q9HCJ5 1215 aa13.42□□□□□ -0.26
TRAV31-201ENST00000502780 NUDT7P0C024 238 aa13.4□□□□□ -0.26
TRAV31-201ENST00000502780 PTCD2Q8WV60 388 aaKnown RBP13.4□□□□□ -0.26
TRAV31-201ENST00000502780 EMILIN3Q9NT22 766 aa13.4□□□□□ -0.26
TRAV31-201ENST00000502780 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
TRAV31-201ENST00000502780 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
TRAV31-201ENST00000502780 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
TRAV31-201ENST00000502780 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
TRAV31-201ENST00000502780 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
TRAV31-201ENST00000502780 TBC1D12O60347 775 aa13.34□□□□□ -0.27
TRAV31-201ENST00000502780 ERBB3P21860 1342 aa13.34□□□□□ -0.27
TRAV31-201ENST00000502780 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
TRAV31-201ENST00000502780 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
TRAV31-201ENST00000502780 E2F4Q16254 413 aa13.31□□□□□ -0.28
TRAV31-201ENST00000502780 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
TRAV31-201ENST00000502780 LHX6Q9UPM6 363 aa13.3□□□□□ -0.28
TRAV31-201ENST00000502780 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
TRAV31-201ENST00000502780 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
TRAV31-201ENST00000502780 DPYSL4O14531 572 aa13.29□□□□□ -0.28
TRAV31-201ENST00000502780 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
TRAV31-201ENST00000502780 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
TRAV31-201ENST00000502780 EVI5O60447 810 aa13.25□□□□□ -0.29
TRAV31-201ENST00000502780 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
TRAV31-201ENST00000502780 KCNV2Q8TDN2 545 aa13.2□□□□□ -0.3
TRAV31-201ENST00000502780 ANO8Q9HCE9 1232 aaPredicted RBP13.18□□□□□ -0.3
TRAV31-201ENST00000502780 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
TRAV31-201ENST00000502780 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
TRAV31-201ENST00000502780 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
TRAV31-201ENST00000502780 DDX12PQ92771 950 aa13.11□□□□□ -0.31
TRAV31-201ENST00000502780 AXIN2Q9Y2T1 843 aa13.11□□□□□ -0.31
TRAV31-201ENST00000502780 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
TRAV31-201ENST00000502780 FOSBP53539 338 aa13.1□□□□□ -0.31
TRAV31-201ENST00000502780 PDIA6Q15084 440 aa13.09□□□□□ -0.31
TRAV31-201ENST00000502780 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
TRAV31-201ENST00000502780 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
TRAV31-201ENST00000502780 KRTAP3-3Q9BYR6 98 aa13.09□□□□□ -0.31
TRAV31-201ENST00000502780 KRTAP3-2Q9BYR7 98 aa13.09□□□□□ -0.31
TRAV31-201ENST00000502780 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
TRAV31-201ENST00000502780 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
TRAV31-201ENST00000502780 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
TRAV31-201ENST00000502780 PCDH10Q9P2E7 1040 aa13.07□□□□□ -0.32
TRAV31-201ENST00000502780 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
TRAV31-201ENST00000502780 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
TRAV31-201ENST00000502780 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
TRAV31-201ENST00000502780 GRXCR2A6NFK2 248 aa13.04□□□□□ -0.32
TRAV31-201ENST00000502780 PSEN2P49810 448 aa13.03□□□□□ -0.32
TRAV31-201ENST00000502780 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
TRAV31-201ENST00000502780 PTGER2P43116 358 aa13.02□□□□□ -0.33
TRAV31-201ENST00000502780 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.33
TRAV31-201ENST00000502780 PHF14O94880 888 aa13.01□□□□□ -0.33
TRAV31-201ENST00000502780 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
TRAV31-201ENST00000502780 KCNK17Q96T54 332 aa13□□□□□ -0.33
TRAV31-201ENST00000502780 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
TRAV31-201ENST00000502780 MLLT3P42568 568 aaPredicted RBP12.99□□□□□ -0.33
TRAV31-201ENST00000502780 NBR1Q14596 966 aa12.99□□□□□ -0.33
TRAV31-201ENST00000502780 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
TRAV31-201ENST00000502780 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
TRAV31-201ENST00000502780 SEMA3EO15041 775 aa12.98□□□□□ -0.33
TRAV31-201ENST00000502780 DMRTA1Q5VZB9 504 aa12.98□□□□□ -0.33
TRAV31-201ENST00000502780 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
TRAV31-201ENST00000502780 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
TRAV31-201ENST00000502780 PBX2P40425 430 aa12.95□□□□□ -0.34
TRAV31-201ENST00000502780 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAV31-201ENST00000502780 EPAS1Q99814 870 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms