RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 HECW2Q9P2P5 1572 aa19.33■□□□□ 0.69
CDK7-202ENST00000502604 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
CDK7-202ENST00000502604 CASKIN1Q8WXD9 1431 aa19.33■□□□□ 0.68
CDK7-202ENST00000502604 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
CDK7-202ENST00000502604 CCDC18Q5T9S5 1454 aa19.3■□□□□ 0.68
CDK7-202ENST00000502604 CLIP1P30622 1438 aa19.3■□□□□ 0.68
CDK7-202ENST00000502604 POGZQ7Z3K3 1410 aa19.29■□□□□ 0.68
CDK7-202ENST00000502604 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
CDK7-202ENST00000502604 MADDQ8WXG6 1647 aa19.29■□□□□ 0.68
CDK7-202ENST00000502604 CDC42BPBQ9Y5S2 1711 aa19.29■□□□□ 0.68
CDK7-202ENST00000502604 ADRA2BP18089 450 aa19.28■□□□□ 0.68
CDK7-202ENST00000502604 SCAPERQ9BY12 1400 aa19.28■□□□□ 0.68
CDK7-202ENST00000502604 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
CDK7-202ENST00000502604 YEATS2Q9ULM3 1422 aa19.27■□□□□ 0.68
CDK7-202ENST00000502604 ARHGAP5Q13017 1502 aa19.27■□□□□ 0.67
CDK7-202ENST00000502604 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
CDK7-202ENST00000502604 PTPRMP28827 1452 aa19.26■□□□□ 0.67
CDK7-202ENST00000502604 PREX2Q70Z35 1606 aa19.25■□□□□ 0.67
CDK7-202ENST00000502604 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
CDK7-202ENST00000502604 MAGI2Q86UL8 1455 aa19.24■□□□□ 0.67
CDK7-202ENST00000502604 RIMS1Q86UR5 1692 aaKnown RBP19.23■□□□□ 0.67
CDK7-202ENST00000502604 CDC42BPAQ5VT25 1732 aa19.23■□□□□ 0.67
CDK7-202ENST00000502604 KDM5CP41229 1560 aa19.19■□□□□ 0.66
CDK7-202ENST00000502604 ZNF518AQ6AHZ1 1483 aa19.19■□□□□ 0.66
CDK7-202ENST00000502604 FER1L4A9Z1Z3 1794 aa19.17■□□□□ 0.66
CDK7-202ENST00000502604 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
CDK7-202ENST00000502604 ABCC1P33527 1531 aa19.17■□□□□ 0.66
CDK7-202ENST00000502604 ATP10AO60312 1499 aa19.14■□□□□ 0.66
CDK7-202ENST00000502604 AFAP1Q8N556 730 aa19.14■□□□□ 0.65
CDK7-202ENST00000502604 ARHGEF12Q9NZN5 1544 aa19.14■□□□□ 0.65
CDK7-202ENST00000502604 C9orf84Q5VXU9 1444 aa19.13■□□□□ 0.65
CDK7-202ENST00000502604 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
CDK7-202ENST00000502604 ABCA6Q8N139 1617 aa19.12■□□□□ 0.65
CDK7-202ENST00000502604 DIP2CQ9Y2E4 1556 aa19.12■□□□□ 0.65
CDK7-202ENST00000502604 MLECQ14165 292 aa19.11■□□□□ 0.65
CDK7-202ENST00000502604 TRAPPC8Q9Y2L5 1435 aa19.11■□□□□ 0.65
CDK7-202ENST00000502604 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
CDK7-202ENST00000502604 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
CDK7-202ENST00000502604 LMTK3Q96Q04 1460 aa19.08■□□□□ 0.64
CDK7-202ENST00000502604 MLH3Q9UHC1 1453 aa19.08■□□□□ 0.64
CDK7-202ENST00000502604 KIDINS220Q9ULH0 1771 aa19.07■□□□□ 0.64
CDK7-202ENST00000502604 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
CDK7-202ENST00000502604 SYCP2Q9BX26 1530 aa19.06■□□□□ 0.64
CDK7-202ENST00000502604 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
CDK7-202ENST00000502604 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
CDK7-202ENST00000502604 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
CDK7-202ENST00000502604 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
CDK7-202ENST00000502604 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
CDK7-202ENST00000502604 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
CDK7-202ENST00000502604 CCNB3Q8WWL7 1395 aa19■□□□□ 0.63
CDK7-202ENST00000502604 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
CDK7-202ENST00000502604 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
CDK7-202ENST00000502604 AGLP35573 1532 aa18.98■□□□□ 0.63
CDK7-202ENST00000502604 HNRNPMP52272 730 aaKnown RBP eCLIP18.97■□□□□ 0.632e-9■■■■■ 32.2
CDK7-202ENST00000502604 INO80Q9ULG1 1556 aaPredicted RBP18.96■□□□□ 0.63
CDK7-202ENST00000502604 PREX1Q8TCU6 1659 aa18.96■□□□□ 0.63
CDK7-202ENST00000502604 ILDR1Q86SU0 546 aaPredicted RBP18.96■□□□□ 0.63
CDK7-202ENST00000502604 PLEKHH2Q8IVE3 1493 aa18.96■□□□□ 0.63
CDK7-202ENST00000502604 KIAA1107Q9UPP5 1409 aa18.96■□□□□ 0.63
CDK7-202ENST00000502604 SUPT6HQ7KZ85 1726 aaKnown RBP18.95■□□□□ 0.62
CDK7-202ENST00000502604 C3P01024 1663 aa18.95■□□□□ 0.62
CDK7-202ENST00000502604 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
CDK7-202ENST00000502604 CEBPAP49715 358 aaPredicted RBP18.94■□□□□ 0.62
CDK7-202ENST00000502604 HSPA2P54652 639 aa18.94■□□□□ 0.62
CDK7-202ENST00000502604 SPAG9O60271 1321 aaKnown RBP18.93■□□□□ 0.62
CDK7-202ENST00000502604 ZNF644Q9H582 1327 aaPredicted RBP18.91■□□□□ 0.62
CDK7-202ENST00000502604 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
CDK7-202ENST00000502604 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
CDK7-202ENST00000502604 SETD1BQ9UPS6 1966 aaKnown RBP18.9■□□□□ 0.62
CDK7-202ENST00000502604 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
CDK7-202ENST00000502604 MSH5O43196 834 aa18.9■□□□□ 0.62
CDK7-202ENST00000502604 MBD5Q9P267 1494 aa18.88■□□□□ 0.61
CDK7-202ENST00000502604 ADGBQ8N7X0 1667 aa18.88■□□□□ 0.61
CDK7-202ENST00000502604 A2MP01023 1474 aa18.85■□□□□ 0.61
CDK7-202ENST00000502604 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
CDK7-202ENST00000502604 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
CDK7-202ENST00000502604 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
CDK7-202ENST00000502604 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
CDK7-202ENST00000502604 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
CDK7-202ENST00000502604 UHRF1BP1Q6BDS2 1440 aa18.83■□□□□ 0.6
CDK7-202ENST00000502604 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.6
CDK7-202ENST00000502604 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
CDK7-202ENST00000502604 CCDC141Q6ZP82 1450 aa18.8■□□□□ 0.6
CDK7-202ENST00000502604 RTEL1-TNFRSF6BF6WH68 1400 aa18.79■□□□□ 0.6
CDK7-202ENST00000502604 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
CDK7-202ENST00000502604 ARHGEF5Q12774 1597 aa18.77■□□□□ 0.59
CDK7-202ENST00000502604 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.59
CDK7-202ENST00000502604 ZMYM3Q14202 1370 aa18.76■□□□□ 0.59
CDK7-202ENST00000502604 GGT6Q6P531 493 aa18.75■□□□□ 0.59
CDK7-202ENST00000502604 NPATQ14207 1427 aa18.73■□□□□ 0.59
CDK7-202ENST00000502604 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
CDK7-202ENST00000502604 DHX29Q7Z478 1369 aaKnown RBP18.72■□□□□ 0.59
CDK7-202ENST00000502604 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
CDK7-202ENST00000502604 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
CDK7-202ENST00000502604 ZNF142P52746 1687 aaPredicted RBP18.69■□□□□ 0.58
CDK7-202ENST00000502604 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
CDK7-202ENST00000502604 PTPRKQ15262 1439 aa18.69■□□□□ 0.58
CDK7-202ENST00000502604 MAST1Q9Y2H9 1570 aa18.68■□□□□ 0.58
CDK7-202ENST00000502604 CAMSAP1Q5T5Y3 1602 aa18.66■□□□□ 0.58
CDK7-202ENST00000502604 KIF3BO15066 747 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms