RNA–Protein interactions for RNA: ENST00000502448.5

NFXL1-204, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 1,760 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-204ENST00000502448 LMOD2Q6P5Q4 547 aa8.67□□□□□ -1.02
NFXL1-204ENST00000502448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
NFXL1-204ENST00000502448 C3orf67Q6ZVT6 689 aa8.66□□□□□ -1.02
NFXL1-204ENST00000502448 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
NFXL1-204ENST00000502448 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
NFXL1-204ENST00000502448 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 MYT1Q01538 1121 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 P3H3Q8IVL6 736 aa8.63□□□□□ -1.03
NFXL1-204ENST00000502448 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
NFXL1-204ENST00000502448 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
NFXL1-204ENST00000502448 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
NFXL1-204ENST00000502448 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
NFXL1-204ENST00000502448 TMEM106CQ9BVX2 250 aa8.61□□□□□ -1.03
NFXL1-204ENST00000502448 RGS20O76081 388 aa8.61□□□□□ -1.03
NFXL1-204ENST00000502448 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
NFXL1-204ENST00000502448 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
NFXL1-204ENST00000502448 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
NFXL1-204ENST00000502448 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
NFXL1-204ENST00000502448 HOXB3P14651 431 aaPredicted RBP8.56□□□□□ -1.04
NFXL1-204ENST00000502448 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
NFXL1-204ENST00000502448 ZBTB7CA1YPR0 619 aa8.54□□□□□ -1.04
NFXL1-204ENST00000502448 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
NFXL1-204ENST00000502448 Q6ZNB5 142 aa8.53□□□□□ -1.04
NFXL1-204ENST00000502448 ZNF710Q8N1W2 664 aa8.53□□□□□ -1.04
NFXL1-204ENST00000502448 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
NFXL1-204ENST00000502448 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
NFXL1-204ENST00000502448 RNF25Q96BH1 459 aaPredicted RBP8.5□□□□□ -1.05
NFXL1-204ENST00000502448 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
NFXL1-204ENST00000502448 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
NFXL1-204ENST00000502448 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
NFXL1-204ENST00000502448 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
NFXL1-204ENST00000502448 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
NFXL1-204ENST00000502448 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
NFXL1-204ENST00000502448 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
NFXL1-204ENST00000502448 ARID3AQ99856 593 aa8.47□□□□□ -1.05
NFXL1-204ENST00000502448 PLCD3Q8N3E9 789 aa8.46□□□□□ -1.05
NFXL1-204ENST00000502448 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.05
NFXL1-204ENST00000502448 MIER1Q8N108 512 aa8.45□□□□□ -1.06
NFXL1-204ENST00000502448 RASEFQ8IZ41 740 aa8.42□□□□□ -1.06
NFXL1-204ENST00000502448 PDCD7Q8N8D1 485 aaKnown RBP8.41□□□□□ -1.06
NFXL1-204ENST00000502448 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
NFXL1-204ENST00000502448 CCDC180Q9P1Z9 1646 aa8.4□□□□□ -1.06
NFXL1-204ENST00000502448 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
NFXL1-204ENST00000502448 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
NFXL1-204ENST00000502448 ZMYND10O75800 440 aa8.38□□□□□ -1.07
NFXL1-204ENST00000502448 ZBTB47Q9UFB7 747 aaPredicted RBP8.35□□□□□ -1.07
NFXL1-204ENST00000502448 APBB1O00213 710 aa8.35□□□□□ -1.07
NFXL1-204ENST00000502448 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
NFXL1-204ENST00000502448 IGSF3O75054 1194 aa8.35□□□□□ -1.07
NFXL1-204ENST00000502448 SHROOM4Q9ULL8 1493 aa8.34□□□□□ -1.07
NFXL1-204ENST00000502448 ARID3CA6NKF2 412 aa8.33□□□□□ -1.08
NFXL1-204ENST00000502448 ABCC9O60706 1549 aa8.33□□□□□ -1.08
NFXL1-204ENST00000502448 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
NFXL1-204ENST00000502448 KCTD17Q8N5Z5 321 aa8.32□□□□□ -1.08
NFXL1-204ENST00000502448 STK25O00506 426 aa8.31□□□□□ -1.08
NFXL1-204ENST00000502448 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 EIF5BO60841 1220 aaKnown RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 WDR70Q9NW82 654 aa8.3□□□□□ -1.08
NFXL1-204ENST00000502448 MKRN3Q13064 507 aaKnown RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
NFXL1-204ENST00000502448 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
NFXL1-204ENST00000502448 TRAIPQ9BWF2 469 aa8.29□□□□□ -1.08
NFXL1-204ENST00000502448 LCE2BO14633 110 aa8.28□□□□□ -1.08
NFXL1-204ENST00000502448 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
NFXL1-204ENST00000502448 BARGINQ6ZT62 677 aa8.27□□□□□ -1.08
NFXL1-204ENST00000502448 CADPS2Q86UW7 1296 aa8.27□□□□□ -1.08
NFXL1-204ENST00000502448 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
NFXL1-204ENST00000502448 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
NFXL1-204ENST00000502448 A0A0G2JS52 829 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 RAD21O60216 631 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 GSE1Q14687 1217 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 IFFO2Q5TF58 517 aa8.26□□□□□ -1.09
NFXL1-204ENST00000502448 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
NFXL1-204ENST00000502448 NUBP1P53384 320 aa8.25□□□□□ -1.09
NFXL1-204ENST00000502448 CCDC82Q8N4S0 544 aa8.25□□□□□ -1.09
NFXL1-204ENST00000502448 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
NFXL1-204ENST00000502448 TRAF7Q6Q0C0 670 aa8.23□□□□□ -1.09
NFXL1-204ENST00000502448 FAM212AQ96EL1 285 aa8.23□□□□□ -1.09
NFXL1-204ENST00000502448 AK7Q96M32 723 aa8.23□□□□□ -1.09
NFXL1-204ENST00000502448 SEMA3EO15041 775 aa8.22□□□□□ -1.09
NFXL1-204ENST00000502448 FLIIQ13045 1269 aa8.22□□□□□ -1.09
NFXL1-204ENST00000502448 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
NFXL1-204ENST00000502448 ZNF775Q96BV0 537 aaPredicted RBP8.21□□□□□ -1.1
NFXL1-204ENST00000502448 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
NFXL1-204ENST00000502448 A6NJR5 290 aa8.2□□□□□ -1.1
NFXL1-204ENST00000502448 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
NFXL1-204ENST00000502448 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
NFXL1-204ENST00000502448 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 DCAF8Q5TAQ9 597 aa8.17□□□□□ -1.1
NFXL1-204ENST00000502448 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
NFXL1-204ENST00000502448 PUS7Q96PZ0 661 aaKnown RBP8.17□□□□□ -1.1
NFXL1-204ENST00000502448 STK24Q9Y6E0 443 aa8.17□□□□□ -1.1
NFXL1-204ENST00000502448 TRAK2O60296 914 aa8.16□□□□□ -1.1
NFXL1-204ENST00000502448 TMCO4Q5TGY1 634 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms