RNA–Protein interactions for RNA: ENST00000498648.5

STRADB-210, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-210ENST00000498648 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
STRADB-210ENST00000498648 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
STRADB-210ENST00000498648 PHF8Q9UPP1 1060 aa8.27□□□□□ -1.09
STRADB-210ENST00000498648 TRAK2O60296 914 aa8.25□□□□□ -1.09
STRADB-210ENST00000498648 EFCAB3Q8N7B9 438 aa8.25□□□□□ -1.09
STRADB-210ENST00000498648 ZNF579Q8NAF0 562 aaKnown RBP8.25□□□□□ -1.09
STRADB-210ENST00000498648 GPR37O15354 613 aa8.22□□□□□ -1.09
STRADB-210ENST00000498648 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
STRADB-210ENST00000498648 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
STRADB-210ENST00000498648 TSPYL2Q9H2G4 693 aaPredicted RBP8.22□□□□□ -1.09
STRADB-210ENST00000498648 KCTD17Q8N5Z5 321 aa8.21□□□□□ -1.1
STRADB-210ENST00000498648 AKT1S1Q96B36 256 aa8.21□□□□□ -1.1
STRADB-210ENST00000498648 GOPCQ9HD26 462 aa8.21□□□□□ -1.1
STRADB-210ENST00000498648 CABP2Q9NPB3 220 aa8.2□□□□□ -1.1
STRADB-210ENST00000498648 AMHR2Q16671 573 aa8.19□□□□□ -1.1
STRADB-210ENST00000498648 PARP9Q8IXQ6 854 aa8.18□□□□□ -1.1
STRADB-210ENST00000498648 MINK1Q8N4C8 1332 aaPredicted RBP8.18□□□□□ -1.1
STRADB-210ENST00000498648 CCDC102AQ96A19 550 aa8.17□□□□□ -1.1
STRADB-210ENST00000498648 MAP2K5Q13163 448 aa8.16□□□□□ -1.1
STRADB-210ENST00000498648 MS4A4AQ96JQ5 239 aa8.15□□□□□ -1.1
STRADB-210ENST00000498648 CCDC61Q9Y6R9 512 aa8.15□□□□□ -1.1
STRADB-210ENST00000498648 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
STRADB-210ENST00000498648 MCM6Q14566 821 aa8.14□□□□□ -1.11
STRADB-210ENST00000498648 PDIA6Q15084 440 aa8.14□□□□□ -1.11
STRADB-210ENST00000498648 RAD21O60216 631 aa8.13□□□□□ -1.11
STRADB-210ENST00000498648 IRF6O14896 467 aa8.12□□□□□ -1.11
STRADB-210ENST00000498648 PPP1R15BQ5SWA1 713 aa8.12□□□□□ -1.11
STRADB-210ENST00000498648 PROSER2Q86WR7 435 aaPredicted RBP8.12□□□□□ -1.11
STRADB-210ENST00000498648 REM2Q8IYK8 340 aaPredicted RBP8.12□□□□□ -1.11
STRADB-210ENST00000498648 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
STRADB-210ENST00000498648 DPYSL4O14531 572 aa8.11□□□□□ -1.11
STRADB-210ENST00000498648 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
STRADB-210ENST00000498648 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
STRADB-210ENST00000498648 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
STRADB-210ENST00000498648 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
STRADB-210ENST00000498648 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
STRADB-210ENST00000498648 ZNF777Q9ULD5 760 aaPredicted RBP8.1□□□□□ -1.11
STRADB-210ENST00000498648 FNBP4Q8N3X1 1017 aaPredicted RBP8.09□□□□□ -1.11
STRADB-210ENST00000498648 CCDC97Q96F63 343 aaPredicted RBP8.09□□□□□ -1.11
STRADB-210ENST00000498648 EMILIN3Q9NT22 766 aa8.08□□□□□ -1.12
STRADB-210ENST00000498648 LOC105371045A0A1W2PR82 267 aa8.06□□□□□ -1.12
STRADB-210ENST00000498648 TTLL12Q14166 644 aaPredicted RBP8.06□□□□□ -1.12
STRADB-210ENST00000498648 TMCO4Q5TGY1 634 aa8.06□□□□□ -1.12
STRADB-210ENST00000498648 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
STRADB-210ENST00000498648 GNPATO15228 680 aa8.05□□□□□ -1.12
STRADB-210ENST00000498648 RETREG2Q8NC44 543 aa8.05□□□□□ -1.12
STRADB-210ENST00000498648 MTMR7Q9Y216 660 aa8.05□□□□□ -1.12
STRADB-210ENST00000498648 NUTM2FA1L443 756 aa8.04□□□□□ -1.12
STRADB-210ENST00000498648 PITPNM1O00562 1244 aa8.04□□□□□ -1.12
STRADB-210ENST00000498648 MS4A1P11836 297 aa8.04□□□□□ -1.12
STRADB-210ENST00000498648 SH3D19Q5HYK7 790 aa8.04□□□□□ -1.12
STRADB-210ENST00000498648 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
STRADB-210ENST00000498648 GIGYF2Q6Y7W6 1299 aaKnown RBP8.03□□□□□ -1.12
STRADB-210ENST00000498648 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
STRADB-210ENST00000498648 FARP1Q9Y4F1 1045 aaPredicted RBP8.03□□□□□ -1.12
STRADB-210ENST00000498648 MAP3K13O43283 966 aa8.02□□□□□ -1.13
STRADB-210ENST00000498648 HIC1Q14526 733 aa8.02□□□□□ -1.13
STRADB-210ENST00000498648 CHADLQ6NUI6 762 aa8.02□□□□□ -1.13
STRADB-210ENST00000498648 FECHP22830 423 aa8.01□□□□□ -1.13
STRADB-210ENST00000498648 OXER1Q8TDS5 423 aa8.01□□□□□ -1.13
STRADB-210ENST00000498648 GZF1Q9H116 711 aaPredicted RBP8.01□□□□□ -1.13
STRADB-210ENST00000498648 PLSCR2Q9NRY7 297 aa8.01□□□□□ -1.13
STRADB-210ENST00000498648 IGSF3O75054 1194 aa8□□□□□ -1.13
STRADB-210ENST00000498648 IRF5Q13568 498 aa8□□□□□ -1.13
STRADB-210ENST00000498648 KIF12Q96FN5 646 aa8□□□□□ -1.13
STRADB-210ENST00000498648 FCHSD2O94868 740 aa7.99□□□□□ -1.13
STRADB-210ENST00000498648 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
STRADB-210ENST00000498648 DSG2Q14126 1118 aa7.98□□□□□ -1.13
STRADB-210ENST00000498648 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
STRADB-210ENST00000498648 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
STRADB-210ENST00000498648 REPIN1Q9BWE0 567 aaKnown RBP7.98□□□□□ -1.13
STRADB-210ENST00000498648 OSBPP22059 807 aa7.97□□□□□ -1.13
STRADB-210ENST00000498648 RBM25P49756 843 aaKnown RBP7.96□□□□□ -1.14
STRADB-210ENST00000498648 SKIV2LQ15477 1246 aaKnown RBP7.96□□□□□ -1.14
STRADB-210ENST00000498648 COG6Q9Y2V7 657 aa7.96□□□□□ -1.14
STRADB-210ENST00000498648 SHROOM4Q9ULL8 1493 aa7.95□□□□□ -1.14
STRADB-210ENST00000498648 SPDYE5A6NIY4 337 aa7.95□□□□□ -1.14
STRADB-210ENST00000498648 ZNF428Q96B54 188 aa7.95□□□□□ -1.14
STRADB-210ENST00000498648 PPP1R15AO75807 674 aaPredicted RBP7.94□□□□□ -1.14
STRADB-210ENST00000498648 FOXK1P85037 733 aa7.94□□□□□ -1.14
STRADB-210ENST00000498648 GOLGA2Q08379 1002 aa7.94□□□□□ -1.14
STRADB-210ENST00000498648 TMUB1Q9BVT8 246 aa7.94□□□□□ -1.14
STRADB-210ENST00000498648 PAK3O75914 559 aaPredicted RBP7.93□□□□□ -1.14
STRADB-210ENST00000498648 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
STRADB-210ENST00000498648 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
STRADB-210ENST00000498648 PATL2C9JE40 543 aaKnown RBP7.91□□□□□ -1.14
STRADB-210ENST00000498648 PDE4CQ08493 712 aa7.91□□□□□ -1.14
STRADB-210ENST00000498648 CLCN1P35523 988 aa7.9□□□□□ -1.14
STRADB-210ENST00000498648 PTGDRQ13258 359 aa7.9□□□□□ -1.14
STRADB-210ENST00000498648 PROCA1Q8NCQ7 364 aaPredicted RBP7.9□□□□□ -1.14
STRADB-210ENST00000498648 PTGER2P43116 358 aa7.89□□□□□ -1.15
STRADB-210ENST00000498648 ILDR1Q86SU0 546 aaPredicted RBP7.89□□□□□ -1.15
STRADB-210ENST00000498648 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
STRADB-210ENST00000498648 GPCPD1Q9NPB8 672 aa7.89□□□□□ -1.15
STRADB-210ENST00000498648 E9PSI1 815 aa7.88□□□□□ -1.15
STRADB-210ENST00000498648 MAP3K9P80192 1104 aa7.88□□□□□ -1.15
STRADB-210ENST00000498648 BANK1Q8NDB2 785 aa7.88□□□□□ -1.15
STRADB-210ENST00000498648 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
STRADB-210ENST00000498648 TMEM106CQ9BVX2 250 aa7.87□□□□□ -1.15
STRADB-210ENST00000498648 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms