RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 POGZQ7Z3K3 1410 aa27.11■■□□□ 1.93
MTA1-216ENST00000498644 ARID4BQ4LE39 1312 aaPredicted RBP27.11■■□□□ 1.93
MTA1-216ENST00000498644 ADAMTSL3P82987 1691 aa27.11■■□□□ 1.93
MTA1-216ENST00000498644 ARHGAP5Q13017 1502 aa27.1■■□□□ 1.93
MTA1-216ENST00000498644 BCORL1Q5H9F3 1711 aa27.08■■□□□ 1.93
MTA1-216ENST00000498644 ZFYVE16Q7Z3T8 1539 aa27.08■■□□□ 1.93
MTA1-216ENST00000498644 CDC42BPBQ9Y5S2 1711 aa27.05■■□□□ 1.92
MTA1-216ENST00000498644 YEATS2Q9ULM3 1422 aa27.05■■□□□ 1.92
MTA1-216ENST00000498644 PREX2Q70Z35 1606 aa27.02■■□□□ 1.92
MTA1-216ENST00000498644 PTPRMP28827 1452 aa27.01■■□□□ 1.91
MTA1-216ENST00000498644 ZNF518AQ6AHZ1 1483 aa27.01■■□□□ 1.91
MTA1-216ENST00000498644 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
MTA1-216ENST00000498644 HECW2Q9P2P5 1572 aa26.99■■□□□ 1.91
MTA1-216ENST00000498644 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
MTA1-216ENST00000498644 MADDQ8WXG6 1647 aa26.97■■□□□ 1.91
MTA1-216ENST00000498644 CDC42BPAQ5VT25 1732 aa26.96■■□□□ 1.91
MTA1-216ENST00000498644 ATP10AO60312 1499 aa26.96■■□□□ 1.91
MTA1-216ENST00000498644 KDM5CP41229 1560 aa26.96■■□□□ 1.91
MTA1-216ENST00000498644 SIGLEC1Q9BZZ2 1709 aa26.94■■□□□ 1.9
MTA1-216ENST00000498644 C9orf84Q5VXU9 1444 aa26.92■■□□□ 1.9
MTA1-216ENST00000498644 ABCC1P33527 1531 aa26.91■■□□□ 1.9
MTA1-216ENST00000498644 MTUS2Q5JR59 1369 aa26.9■■□□□ 1.9
MTA1-216ENST00000498644 ARHGEF12Q9NZN5 1544 aa26.89■■□□□ 1.89
MTA1-216ENST00000498644 GPATCH8Q9UKJ3 1502 aaKnown RBP26.89■■□□□ 1.89
MTA1-216ENST00000498644 RIMS1Q86UR5 1692 aaKnown RBP26.89■■□□□ 1.89
MTA1-216ENST00000498644 MLH3Q9UHC1 1453 aa26.88■■□□□ 1.89
MTA1-216ENST00000498644 ITSN2Q9NZM3 1697 aa26.88■■□□□ 1.89
MTA1-216ENST00000498644 MYT1LQ9UL68 1186 aa26.87■■□□□ 1.89
MTA1-216ENST00000498644 TRAPPC8Q9Y2L5 1435 aa26.87■■□□□ 1.89
MTA1-216ENST00000498644 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
MTA1-216ENST00000498644 MLECQ14165 292 aa26.84■■□□□ 1.89
MTA1-216ENST00000498644 ZNF777Q9ULD5 760 aaPredicted RBP26.84■■□□□ 1.89
MTA1-216ENST00000498644 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
MTA1-216ENST00000498644 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
MTA1-216ENST00000498644 SAMD9LQ8IVG5 1584 aa26.82■■□□□ 1.88
MTA1-216ENST00000498644 DIP2CQ9Y2E4 1556 aa26.82■■□□□ 1.88
MTA1-216ENST00000498644 REREQ9P2R6 1566 aa26.81■■□□□ 1.88
MTA1-216ENST00000498644 FER1L4A9Z1Z3 1794 aa26.8■■□□□ 1.88
MTA1-216ENST00000498644 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
MTA1-216ENST00000498644 KIAA1107Q9UPP5 1409 aa26.78■■□□□ 1.88
MTA1-216ENST00000498644 PLEKHH2Q8IVE3 1493 aa26.78■■□□□ 1.88
MTA1-216ENST00000498644 ABCA6Q8N139 1617 aa26.78■■□□□ 1.88
MTA1-216ENST00000498644 SYCP2Q9BX26 1530 aa26.76■■□□□ 1.87
MTA1-216ENST00000498644 HNRNPMP52272 730 aaKnown RBP eCLIP26.76■■□□□ 1.871e-7■■■■■ 28.2
MTA1-216ENST00000498644 KIDINS220Q9ULH0 1771 aa26.76■■□□□ 1.87
MTA1-216ENST00000498644 TIAM1Q13009 1591 aa26.73■■□□□ 1.87
MTA1-216ENST00000498644 AGLP35573 1532 aa26.72■■□□□ 1.87
MTA1-216ENST00000498644 VPS8Q8N3P4 1428 aa26.72■■□□□ 1.87
MTA1-216ENST00000498644 SPAG9O60271 1321 aaKnown RBP26.71■■□□□ 1.87
MTA1-216ENST00000498644 LMTK3Q96Q04 1460 aa26.71■■□□□ 1.87
MTA1-216ENST00000498644 PLPPR3Q6T4P5 718 aa26.7■■□□□ 1.86
MTA1-216ENST00000498644 SUPT6HQ7KZ85 1726 aaKnown RBP26.67■■□□□ 1.86
MTA1-216ENST00000498644 ZNF644Q9H582 1327 aaPredicted RBP26.65■■□□□ 1.86
MTA1-216ENST00000498644 NCOA2Q15596 1464 aa26.64■■□□□ 1.86
MTA1-216ENST00000498644 ATP7AQ04656 1500 aa26.64■■□□□ 1.85
MTA1-216ENST00000498644 INO80Q9ULG1 1556 aaPredicted RBP26.62■■□□□ 1.85
MTA1-216ENST00000498644 MBD5Q9P267 1494 aa26.61■■□□□ 1.85
MTA1-216ENST00000498644 CEBPAP49715 358 aaPredicted RBP26.6■■□□□ 1.85
MTA1-216ENST00000498644 ESF1Q9H501 851 aaKnown RBP26.6■■□□□ 1.85
MTA1-216ENST00000498644 MAP3K1Q13233 1512 aa26.6■■□□□ 1.85
MTA1-216ENST00000498644 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
MTA1-216ENST00000498644 SETD1BQ9UPS6 1966 aaKnown RBP26.55■■□□□ 1.84
MTA1-216ENST00000498644 HSPA2P54652 639 aa26.55■■□□□ 1.84
MTA1-216ENST00000498644 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
MTA1-216ENST00000498644 CNTLNQ9NXG0 1405 aa26.55■■□□□ 1.84
MTA1-216ENST00000498644 A2MP01023 1474 aa26.55■■□□□ 1.84
MTA1-216ENST00000498644 PREX1Q8TCU6 1659 aa26.54■■□□□ 1.84
MTA1-216ENST00000498644 RSPH4AQ5TD94 716 aa26.54■■□□□ 1.84
MTA1-216ENST00000498644 PLXNC1O60486 1568 aa26.53■■□□□ 1.84
MTA1-216ENST00000498644 C3P01024 1663 aa26.52■■□□□ 1.84
MTA1-216ENST00000498644 ADGBQ8N7X0 1667 aa26.52■■□□□ 1.84
MTA1-216ENST00000498644 CAMSAP2Q08AD1 1489 aa26.51■■□□□ 1.83
MTA1-216ENST00000498644 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
MTA1-216ENST00000498644 ILDR1Q86SU0 546 aaPredicted RBP26.49■■□□□ 1.83
MTA1-216ENST00000498644 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
MTA1-216ENST00000498644 MROH2AA6NES4 1674 aa26.47■■□□□ 1.83
MTA1-216ENST00000498644 UHRF1BP1Q6BDS2 1440 aa26.47■■□□□ 1.83
MTA1-216ENST00000498644 PPP6R1Q9UPN7 881 aa26.45■■□□□ 1.82
MTA1-216ENST00000498644 ARHGEF5Q12774 1597 aa26.44■■□□□ 1.82
MTA1-216ENST00000498644 DHX29Q7Z478 1369 aaKnown RBP26.44■■□□□ 1.82
MTA1-216ENST00000498644 ZMYM3Q14202 1370 aa26.43■■□□□ 1.82
MTA1-216ENST00000498644 APLP2Q06481 763 aa26.42■■□□□ 1.82
MTA1-216ENST00000498644 GGT6Q6P531 493 aa26.42■■□□□ 1.82
MTA1-216ENST00000498644 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
MTA1-216ENST00000498644 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
MTA1-216ENST00000498644 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
MTA1-216ENST00000498644 NPATQ14207 1427 aa26.39■■□□□ 1.81
MTA1-216ENST00000498644 MYOM3Q5VTT5 1437 aa26.39■■□□□ 1.81
MTA1-216ENST00000498644 CLTCQ00610 1675 aaKnown RBP26.38■■□□□ 1.81
MTA1-216ENST00000498644 DMRT2Q9Y5R5 561 aa26.33■■□□□ 1.81
MTA1-216ENST00000498644 KIF3BO15066 747 aa26.32■■□□□ 1.8
MTA1-216ENST00000498644 STRCQ7RTU9 1775 aa26.32■■□□□ 1.8
MTA1-216ENST00000498644 MAST1Q9Y2H9 1570 aa26.3■■□□□ 1.8
MTA1-216ENST00000498644 FBXO41Q8TF61 875 aa26.28■■□□□ 1.8
MTA1-216ENST00000498644 PTPRKQ15262 1439 aa26.28■■□□□ 1.8
MTA1-216ENST00000498644 FAM135AQ9P2D6 1515 aa26.26■■□□□ 1.79
MTA1-216ENST00000498644 KDM5DQ9BY66 1539 aa26.22■■□□□ 1.79
MTA1-216ENST00000498644 PTPN23Q9H3S7 1636 aa26.21■■□□□ 1.79
MTA1-216ENST00000498644 WASHC2CQ9Y4E1 1318 aa26.21■■□□□ 1.79
MTA1-216ENST00000498644 PTPRTO14522 1441 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms