RNA–Protein interactions for RNA: ENST00000498559.5

AGAP3-225, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-225ENST00000498559 BCORL1Q5H9F3 1711 aa29.3■■■□□ 2.28
AGAP3-225ENST00000498559 POGZQ7Z3K3 1410 aa29.29■■■□□ 2.28
AGAP3-225ENST00000498559 MAGI2Q86UL8 1455 aa29.28■■■□□ 2.28
AGAP3-225ENST00000498559 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
AGAP3-225ENST00000498559 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
AGAP3-225ENST00000498559 EFCAB2Q5VUJ9 269 aa29.25■■■□□ 2.27
AGAP3-225ENST00000498559 YEATS2Q9ULM3 1422 aa29.23■■■□□ 2.27
AGAP3-225ENST00000498559 ARHGAP5Q13017 1502 aa29.22■■■□□ 2.27
AGAP3-225ENST00000498559 CDC42BPBQ9Y5S2 1711 aa29.22■■■□□ 2.27
AGAP3-225ENST00000498559 PREX2Q70Z35 1606 aa29.21■■■□□ 2.27
AGAP3-225ENST00000498559 MADDQ8WXG6 1647 aa29.2■■■□□ 2.27
AGAP3-225ENST00000498559 SIGLEC1Q9BZZ2 1709 aa29.2■■■□□ 2.27
AGAP3-225ENST00000498559 PTPRMP28827 1452 aa29.2■■■□□ 2.26
AGAP3-225ENST00000498559 KDM5CP41229 1560 aa29.16■■■□□ 2.26
AGAP3-225ENST00000498559 ARID4BQ4LE39 1312 aaPredicted RBP29.16■■■□□ 2.26
AGAP3-225ENST00000498559 ZNF518AQ6AHZ1 1483 aa29.16■■■□□ 2.26
AGAP3-225ENST00000498559 CDC42BPAQ5VT25 1732 aa29.13■■■□□ 2.25
AGAP3-225ENST00000498559 ABCC1P33527 1531 aa29.1■■■□□ 2.25
AGAP3-225ENST00000498559 CEP162Q5TB80 1403 aa29.08■■■□□ 2.25
AGAP3-225ENST00000498559 ATP10AO60312 1499 aa29.08■■■□□ 2.25
AGAP3-225ENST00000498559 RIMS1Q86UR5 1692 aaKnown RBP29.08■■■□□ 2.25
AGAP3-225ENST00000498559 ITSN2Q9NZM3 1697 aa29.06■■■□□ 2.24
AGAP3-225ENST00000498559 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
AGAP3-225ENST00000498559 ARHGEF12Q9NZN5 1544 aa29.05■■■□□ 2.24
AGAP3-225ENST00000498559 AFAP1Q8N556 730 aa29.03■■■□□ 2.24
AGAP3-225ENST00000498559 DIP2CQ9Y2E4 1556 aa29.01■■■□□ 2.24
AGAP3-225ENST00000498559 MLH3Q9UHC1 1453 aa29.01■■■□□ 2.23
AGAP3-225ENST00000498559 GPATCH8Q9UKJ3 1502 aaKnown RBP29■■■□□ 2.23
AGAP3-225ENST00000498559 TRAPPC8Q9Y2L5 1435 aa29■■■□□ 2.23
AGAP3-225ENST00000498559 REREQ9P2R6 1566 aa29■■■□□ 2.23
AGAP3-225ENST00000498559 FER1L4A9Z1Z3 1794 aa28.99■■■□□ 2.23
AGAP3-225ENST00000498559 ABCA6Q8N139 1617 aa28.98■■■□□ 2.23
AGAP3-225ENST00000498559 SAMD9LQ8IVG5 1584 aa28.97■■■□□ 2.23
AGAP3-225ENST00000498559 LMTK3Q96Q04 1460 aa28.96■■■□□ 2.23
AGAP3-225ENST00000498559 MTUS2Q5JR59 1369 aa28.94■■■□□ 2.22
AGAP3-225ENST00000498559 EHBP1L1Q8N3D4 1523 aa28.93■■■□□ 2.22
AGAP3-225ENST00000498559 FBXO41Q8TF61 875 aa28.92■■■□□ 2.22
AGAP3-225ENST00000498559 KIDINS220Q9ULH0 1771 aa28.92■■■□□ 2.22
AGAP3-225ENST00000498559 SYCP2Q9BX26 1530 aa28.91■■■□□ 2.22
AGAP3-225ENST00000498559 MLECQ14165 292 aa28.9■■■□□ 2.22
AGAP3-225ENST00000498559 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
AGAP3-225ENST00000498559 CCNB3Q8WWL7 1395 aa28.88■■■□□ 2.21
AGAP3-225ENST00000498559 AGLP35573 1532 aa28.87■■■□□ 2.21
AGAP3-225ENST00000498559 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
AGAP3-225ENST00000498559 PLEKHH2Q8IVE3 1493 aa28.85■■■□□ 2.21
AGAP3-225ENST00000498559 ZNF777Q9ULD5 760 aaPredicted RBP28.84■■■□□ 2.21
AGAP3-225ENST00000498559 CFDP1Q9UEE9 299 aaPredicted RBP28.83■■■□□ 2.21
AGAP3-225ENST00000498559 MYT1LQ9UL68 1186 aa28.83■■■□□ 2.21
AGAP3-225ENST00000498559 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
AGAP3-225ENST00000498559 INO80Q9ULG1 1556 aaPredicted RBP28.79■■■□□ 2.2
AGAP3-225ENST00000498559 VPS8Q8N3P4 1428 aa28.77■■■□□ 2.2
AGAP3-225ENST00000498559 HNRNPMP52272 730 aaKnown RBP eCLIP28.77■■■□□ 2.2
AGAP3-225ENST00000498559 ATP7AQ04656 1500 aa28.77■■■□□ 2.2
AGAP3-225ENST00000498559 SUPT6HQ7KZ85 1726 aaKnown RBP28.75■■■□□ 2.19
AGAP3-225ENST00000498559 SPAG9O60271 1321 aaKnown RBP28.74■■■□□ 2.19
AGAP3-225ENST00000498559 PLPPR3Q6T4P5 718 aa28.73■■■□□ 2.19
AGAP3-225ENST00000498559 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
AGAP3-225ENST00000498559 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
AGAP3-225ENST00000498559 PLXNC1O60486 1568 aa28.71■■■□□ 2.19
AGAP3-225ENST00000498559 PREX1Q8TCU6 1659 aa28.71■■■□□ 2.19
AGAP3-225ENST00000498559 HSPA2P54652 639 aa28.7■■■□□ 2.18
AGAP3-225ENST00000498559 ZNF644Q9H582 1327 aaPredicted RBP28.69■■■□□ 2.18
AGAP3-225ENST00000498559 C3P01024 1663 aa28.68■■■□□ 2.18
AGAP3-225ENST00000498559 CEBPAP49715 358 aaPredicted RBP28.67■■■□□ 2.18
AGAP3-225ENST00000498559 LRRC9Q6ZRR7 1453 aa28.65■■■□□ 2.18
AGAP3-225ENST00000498559 MAP3K1Q13233 1512 aa28.64■■■□□ 2.18
AGAP3-225ENST00000498559 A2MP01023 1474 aa28.64■■■□□ 2.17
AGAP3-225ENST00000498559 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.17
AGAP3-225ENST00000498559 ADGBQ8N7X0 1667 aa28.64■■■□□ 2.17
AGAP3-225ENST00000498559 CNTLNQ9NXG0 1405 aa28.63■■■□□ 2.17
AGAP3-225ENST00000498559 MROH2AA6NES4 1674 aa28.61■■■□□ 2.17
AGAP3-225ENST00000498559 CAMSAP2Q08AD1 1489 aa28.61■■■□□ 2.17
AGAP3-225ENST00000498559 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
AGAP3-225ENST00000498559 CCDC141Q6ZP82 1450 aa28.58■■■□□ 2.17
AGAP3-225ENST00000498559 UHRF1BP1Q6BDS2 1440 aa28.56■■■□□ 2.16
AGAP3-225ENST00000498559 ESF1Q9H501 851 aaKnown RBP28.56■■■□□ 2.16
AGAP3-225ENST00000498559 ARHGEF5Q12774 1597 aa28.54■■■□□ 2.16
AGAP3-225ENST00000498559 CLTCQ00610 1675 aaKnown RBP28.5■■■□□ 2.15
AGAP3-225ENST00000498559 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
AGAP3-225ENST00000498559 RSPH4AQ5TD94 716 aa28.49■■■□□ 2.15
AGAP3-225ENST00000498559 CERKQ8TCT0 537 aa28.49■■■□□ 2.15
AGAP3-225ENST00000498559 STRCQ7RTU9 1775 aa28.48■■■□□ 2.15
AGAP3-225ENST00000498559 NPATQ14207 1427 aa28.48■■■□□ 2.15
AGAP3-225ENST00000498559 DHX29Q7Z478 1369 aaKnown RBP28.48■■■□□ 2.15
AGAP3-225ENST00000498559 ZMYM3Q14202 1370 aa28.47■■■□□ 2.15
AGAP3-225ENST00000498559 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
AGAP3-225ENST00000498559 PPP6R1Q9UPN7 881 aa28.43■■■□□ 2.14
AGAP3-225ENST00000498559 MIA2Q96PC5 1412 aa28.43■■■□□ 2.14
AGAP3-225ENST00000498559 GGT6Q6P531 493 aa28.41■■■□□ 2.14
AGAP3-225ENST00000498559 MAST1Q9Y2H9 1570 aa28.41■■■□□ 2.14
AGAP3-225ENST00000498559 DMRT2Q9Y5R5 561 aa28.39■■■□□ 2.14
AGAP3-225ENST00000498559 PTPRKQ15262 1439 aa28.38■■■□□ 2.13
AGAP3-225ENST00000498559 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
AGAP3-225ENST00000498559 ZNF142P52746 1687 aaPredicted RBP28.35■■■□□ 2.13
AGAP3-225ENST00000498559 MYO3AQ8NEV4 1616 aa28.35■■■□□ 2.13
AGAP3-225ENST00000498559 TSPY4P0CV99 314 aa28.33■■■□□ 2.13
AGAP3-225ENST00000498559 TSPY10P0CW01 314 aa28.33■■■□□ 2.13
AGAP3-225ENST00000498559 NCOA1Q15788 1441 aa28.32■■■□□ 2.12
AGAP3-225ENST00000498559 KDM5DQ9BY66 1539 aa28.32■■■□□ 2.12
AGAP3-225ENST00000498559 PTPRTO14522 1441 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms