RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
PBX1-211ENST00000498497 ZBTB22O15209 634 aa15.16■□□□□ 0.02
PBX1-211ENST00000498497 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
PBX1-211ENST00000498497 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
PBX1-211ENST00000498497 IGSF3O75054 1194 aa15.14■□□□□ 0.01
PBX1-211ENST00000498497 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
PBX1-211ENST00000498497 TAF7LQ5H9L4 462 aa15.14■□□□□ 0.01
PBX1-211ENST00000498497 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
PBX1-211ENST00000498497 R3HCC1Q9Y3T6 440 aaKnown RBP15.12■□□□□ 0.01
PBX1-211ENST00000498497 MAPKBP1O60336 1514 aa15.12■□□□□ 0.01
PBX1-211ENST00000498497 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
PBX1-211ENST00000498497 RRP1P56182 461 aaKnown RBP15.11■□□□□ 0.01
PBX1-211ENST00000498497 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
PBX1-211ENST00000498497 SCRIBQ14160 1630 aa15.08■□□□□ 0
PBX1-211ENST00000498497 CRBNQ96SW2 442 aa15.08■□□□□ 0
PBX1-211ENST00000498497 CERS3Q8IU89 383 aa15.07■□□□□ 0
PBX1-211ENST00000498497 ZNF830Q96NB3 372 aaPredicted RBP15.07■□□□□ 0
PBX1-211ENST00000498497 RCAN3Q9UKA8 241 aa15.06■□□□□ 0
PBX1-211ENST00000498497 MS4A1P11836 297 aa15.05■□□□□ -0
PBX1-211ENST00000498497 TMC1Q8TDI8 760 aa15.04■□□□□ -0
PBX1-211ENST00000498497 TPM2P07951 284 aa15.03■□□□□ -0
PBX1-211ENST00000498497 RIPK4P57078 832 aa15.03■□□□□ -0
PBX1-211ENST00000498497 CDCA7LQ96GN5 454 aa15.03■□□□□ -0
PBX1-211ENST00000498497 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
PBX1-211ENST00000498497 CDK11BP21127 795 aaKnown RBP15.02■□□□□ -0
PBX1-211ENST00000498497 C20orf194Q5TEA3 1177 aa15.02■□□□□ -0
PBX1-211ENST00000498497 AEBP1Q8IUX7 1158 aa15.02■□□□□ -0
PBX1-211ENST00000498497 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
PBX1-211ENST00000498497 CBX1P83916 185 aa15.01□□□□□ -0.01
PBX1-211ENST00000498497 TSC1Q92574 1164 aa15.01□□□□□ -0.01
PBX1-211ENST00000498497 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
PBX1-211ENST00000498497 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
PBX1-211ENST00000498497 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.01
PBX1-211ENST00000498497 PPP4R3BQ5MIZ7 849 aa14.99□□□□□ -0.01
PBX1-211ENST00000498497 ZBTB9Q96C00 473 aa14.99□□□□□ -0.01
PBX1-211ENST00000498497 FAM177BA6PVY3 158 aa14.99□□□□□ -0.01
PBX1-211ENST00000498497 FAM161AQ3B820 660 aa14.99□□□□□ -0.01
PBX1-211ENST00000498497 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
PBX1-211ENST00000498497 UQCRHLA0A096LP55 91 aa14.97□□□□□ -0.01
PBX1-211ENST00000498497 UQCRHP07919 91 aa14.97□□□□□ -0.01
PBX1-211ENST00000498497 CGNQ9P2M7 1197 aaKnown RBP14.97□□□□□ -0.01
PBX1-211ENST00000498497 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
PBX1-211ENST00000498497 SEC24BO95487 1268 aa14.97□□□□□ -0.01
PBX1-211ENST00000498497 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
PBX1-211ENST00000498497 C8orf34Q49A92 452 aa14.97□□□□□ -0.01
PBX1-211ENST00000498497 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
PBX1-211ENST00000498497 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
PBX1-211ENST00000498497 IPO4Q8TEX9 1081 aaKnown RBP14.96□□□□□ -0.02
PBX1-211ENST00000498497 TRAK2O60296 914 aa14.95□□□□□ -0.02
PBX1-211ENST00000498497 MSNP26038 577 aaKnown RBP14.95□□□□□ -0.02
PBX1-211ENST00000498497 DNTTIP2Q5QJE6 756 aaKnown RBP14.95□□□□□ -0.02
PBX1-211ENST00000498497 MPNDQ8N594 471 aa14.94□□□□□ -0.02
PBX1-211ENST00000498497 TMEM51Q9NW97 253 aa14.93□□□□□ -0.02
PBX1-211ENST00000498497 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
PBX1-211ENST00000498497 P3H3Q8IVL6 736 aa14.93□□□□□ -0.02
PBX1-211ENST00000498497 MRE11P49959 708 aa14.92□□□□□ -0.02
PBX1-211ENST00000498497 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
PBX1-211ENST00000498497 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
PBX1-211ENST00000498497 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
PBX1-211ENST00000498497 BECN1Q14457 450 aa14.91□□□□□ -0.02
PBX1-211ENST00000498497 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
PBX1-211ENST00000498497 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
PBX1-211ENST00000498497 GAS2L3Q86XJ1 694 aa14.89□□□□□ -0.03
PBX1-211ENST00000498497 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
PBX1-211ENST00000498497 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
PBX1-211ENST00000498497 MCM4P33991 863 aa14.89□□□□□ -0.03
PBX1-211ENST00000498497 CNTLNQ9NXG0 1405 aa14.89□□□□□ -0.03
PBX1-211ENST00000498497 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
PBX1-211ENST00000498497 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
PBX1-211ENST00000498497 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
PBX1-211ENST00000498497 TRERF1Q96PN7 1200 aa14.87□□□□□ -0.03
PBX1-211ENST00000498497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.87□□□□□ -0.03
PBX1-211ENST00000498497 FSD2A1L4K1 749 aa14.87□□□□□ -0.03
PBX1-211ENST00000498497 KIF21BO75037 1637 aa14.87□□□□□ -0.03
PBX1-211ENST00000498497 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
PBX1-211ENST00000498497 ZSCAN20P17040 1043 aaPredicted RBP14.84□□□□□ -0.03
PBX1-211ENST00000498497 DMTNQ08495 405 aa14.84□□□□□ -0.03
PBX1-211ENST00000498497 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
PBX1-211ENST00000498497 WIZO95785 1651 aa14.84□□□□□ -0.03
PBX1-211ENST00000498497 SECISBP2LQ93073 1101 aaKnown RBP14.83□□□□□ -0.03
PBX1-211ENST00000498497 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
PBX1-211ENST00000498497 KIF7Q2M1P5 1343 aa14.82□□□□□ -0.04
PBX1-211ENST00000498497 CHIC2Q9UKJ5 165 aa14.82□□□□□ -0.04
PBX1-211ENST00000498497 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.81□□□□□ -0.04
PBX1-211ENST00000498497 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
PBX1-211ENST00000498497 CCDC7Q96M83 1385 aa14.81□□□□□ -0.04
PBX1-211ENST00000498497 TBC1D2Q9BYX2 928 aa14.81□□□□□ -0.04
PBX1-211ENST00000498497 OFD1O75665 1012 aa14.8□□□□□ -0.04
PBX1-211ENST00000498497 ZNF771Q7L3S4 317 aaPredicted RBP14.8□□□□□ -0.04
PBX1-211ENST00000498497 FTSJ3Q8IY81 847 aaKnown RBP14.8□□□□□ -0.04
PBX1-211ENST00000498497 ZSCAN30Q86W11 494 aa14.79□□□□□ -0.04
PBX1-211ENST00000498497 PNISRQ8TF01 805 aaKnown RBP14.79□□□□□ -0.04
PBX1-211ENST00000498497 NASPP49321 788 aaPredicted RBP14.78□□□□□ -0.04
PBX1-211ENST00000498497 PANK3Q9H999 370 aa14.78□□□□□ -0.04
PBX1-211ENST00000498497 HAP1P54257 671 aaPredicted RBP14.77□□□□□ -0.05
PBX1-211ENST00000498497 TPRNQ4KMQ1 711 aa14.77□□□□□ -0.05
PBX1-211ENST00000498497 MAP7D2Q96T17 732 aa14.77□□□□□ -0.05
PBX1-211ENST00000498497 KCNJ4P48050 445 aa14.76□□□□□ -0.05
PBX1-211ENST00000498497 RRP7BPQ9NSQ0 103 aa14.76□□□□□ -0.05
PBX1-211ENST00000498497 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms