RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
PDCD4-211ENST00000498367 PAXIP1Q6ZW49 1069 aaPredicted RBP11.4□□□□□ -0.58
PDCD4-211ENST00000498367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.581e-7■□□□□ 9.5
PDCD4-211ENST00000498367 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
PDCD4-211ENST00000498367 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
PDCD4-211ENST00000498367 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
PDCD4-211ENST00000498367 CABP2Q9NPB3 220 aa11.35□□□□□ -0.59
PDCD4-211ENST00000498367 SNPHO15079 494 aa11.34□□□□□ -0.59
PDCD4-211ENST00000498367 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
PDCD4-211ENST00000498367 TMEM121BQ9BXQ6 578 aaPredicted RBP11.34□□□□□ -0.59
PDCD4-211ENST00000498367 ZBTB7CA1YPR0 619 aa11.33□□□□□ -0.6
PDCD4-211ENST00000498367 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
PDCD4-211ENST00000498367 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
PDCD4-211ENST00000498367 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
PDCD4-211ENST00000498367 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
PDCD4-211ENST00000498367 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
PDCD4-211ENST00000498367 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
PDCD4-211ENST00000498367 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
PDCD4-211ENST00000498367 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
PDCD4-211ENST00000498367 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
PDCD4-211ENST00000498367 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
PDCD4-211ENST00000498367 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
PDCD4-211ENST00000498367 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
PDCD4-211ENST00000498367 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
PDCD4-211ENST00000498367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
PDCD4-211ENST00000498367 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
PDCD4-211ENST00000498367 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
PDCD4-211ENST00000498367 G3V3G9 751 aa11.15□□□□□ -0.62
PDCD4-211ENST00000498367 SPNS2Q8IVW8 549 aa11.15□□□□□ -0.62
PDCD4-211ENST00000498367 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
PDCD4-211ENST00000498367 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
PDCD4-211ENST00000498367 SOX12O15370 315 aa11.14□□□□□ -0.63
PDCD4-211ENST00000498367 EMP3P54852 163 aa11.14□□□□□ -0.63
PDCD4-211ENST00000498367 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
PDCD4-211ENST00000498367 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
PDCD4-211ENST00000498367 PUS7Q96PZ0 661 aaKnown RBP11.13□□□□□ -0.63
PDCD4-211ENST00000498367 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
PDCD4-211ENST00000498367 BRD2P25440 801 aaKnown RBP11.1□□□□□ -0.63
PDCD4-211ENST00000498367 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
PDCD4-211ENST00000498367 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
PDCD4-211ENST00000498367 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
PDCD4-211ENST00000498367 PKD2Q13563 968 aa11.08□□□□□ -0.64
PDCD4-211ENST00000498367 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
PDCD4-211ENST00000498367 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
PDCD4-211ENST00000498367 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
PDCD4-211ENST00000498367 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
PDCD4-211ENST00000498367 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
PDCD4-211ENST00000498367 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
PDCD4-211ENST00000498367 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
PDCD4-211ENST00000498367 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
PDCD4-211ENST00000498367 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
PDCD4-211ENST00000498367 ZMYND15Q9H091 742 aa11.03□□□□□ -0.64
PDCD4-211ENST00000498367 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
PDCD4-211ENST00000498367 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
PDCD4-211ENST00000498367 IGSF3O75054 1194 aa10.99□□□□□ -0.65
PDCD4-211ENST00000498367 NLRP6P59044 892 aa10.99□□□□□ -0.65
PDCD4-211ENST00000498367 MFRPQ9BY79 579 aa10.98□□□□□ -0.65
PDCD4-211ENST00000498367 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
PDCD4-211ENST00000498367 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.65
PDCD4-211ENST00000498367 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
PDCD4-211ENST00000498367 ARID3AQ99856 593 aa10.95□□□□□ -0.66
PDCD4-211ENST00000498367 STK24Q9Y6E0 443 aa10.95□□□□□ -0.66
PDCD4-211ENST00000498367 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
PDCD4-211ENST00000498367 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
PDCD4-211ENST00000498367 GPR153Q6NV75 609 aa10.94□□□□□ -0.66
PDCD4-211ENST00000498367 STK25O00506 426 aa10.92□□□□□ -0.66
PDCD4-211ENST00000498367 RGL2O15211 777 aa10.92□□□□□ -0.66
PDCD4-211ENST00000498367 ERBB3P21860 1342 aa10.91□□□□□ -0.66
PDCD4-211ENST00000498367 NEFLP07196 543 aa10.9□□□□□ -0.66
PDCD4-211ENST00000498367 KIF3CO14782 793 aa10.89□□□□□ -0.67
PDCD4-211ENST00000498367 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
PDCD4-211ENST00000498367 BCL11AQ9H165 835 aa10.88□□□□□ -0.67
PDCD4-211ENST00000498367 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
PDCD4-211ENST00000498367 PDE4CQ08493 712 aa10.85□□□□□ -0.67
PDCD4-211ENST00000498367 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
PDCD4-211ENST00000498367 NEUROD2Q15784 382 aa10.83□□□□□ -0.68
PDCD4-211ENST00000498367 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
PDCD4-211ENST00000498367 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
PDCD4-211ENST00000498367 RAD21O60216 631 aa10.82□□□□□ -0.68
PDCD4-211ENST00000498367 ARSIQ5FYB1 569 aa10.82□□□□□ -0.68
PDCD4-211ENST00000498367 NECTIN2Q92692 538 aa10.81□□□□□ -0.68
PDCD4-211ENST00000498367 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.685e-6■■■□□ 19.1
PDCD4-211ENST00000498367 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
PDCD4-211ENST00000498367 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
PDCD4-211ENST00000498367 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
PDCD4-211ENST00000498367 PPP1R37O75864 691 aa10.76□□□□□ -0.69
PDCD4-211ENST00000498367 SLC34A2O95436 690 aa10.76□□□□□ -0.69
PDCD4-211ENST00000498367 DHX37Q8IY37 1157 aaKnown RBP10.74□□□□□ -0.69
PDCD4-211ENST00000498367 HS6ST3Q8IZP7 471 aa10.72□□□□□ -0.69
PDCD4-211ENST00000498367 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
PDCD4-211ENST00000498367 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
PDCD4-211ENST00000498367 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
PDCD4-211ENST00000498367 NUDT7P0C024 238 aa10.69□□□□□ -0.7
PDCD4-211ENST00000498367 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
PDCD4-211ENST00000498367 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
PDCD4-211ENST00000498367 LMOD2Q6P5Q4 547 aa10.68□□□□□ -0.7
PDCD4-211ENST00000498367 PTGER2P43116 358 aa10.67□□□□□ -0.7
PDCD4-211ENST00000498367 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
PDCD4-211ENST00000498367 C1orf115Q9H7X2 142 aa10.67□□□□□ -0.7
PDCD4-211ENST00000498367 MYT1LQ9UL68 1186 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms