RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 MICALL2Q8IY33 904 aa10.92□□□□□ -0.66
PTPRK-215ENST00000498284 BOLA1Q9Y3E2 137 aa10.92□□□□□ -0.66
PTPRK-215ENST00000498284 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-215ENST00000498284 G3V3G9 751 aa10.9□□□□□ -0.66
PTPRK-215ENST00000498284 TMEM121BQ9BXQ6 578 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-215ENST00000498284 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
PTPRK-215ENST00000498284 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
PTPRK-215ENST00000498284 PDE4AP27815 886 aa10.85□□□□□ -0.67
PTPRK-215ENST00000498284 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
PTPRK-215ENST00000498284 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
PTPRK-215ENST00000498284 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
PTPRK-215ENST00000498284 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
PTPRK-215ENST00000498284 MFSD10Q14728 455 aa10.79□□□□□ -0.68
PTPRK-215ENST00000498284 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-215ENST00000498284 TMC2Q8TDI7 906 aa10.78□□□□□ -0.68
PTPRK-215ENST00000498284 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
PTPRK-215ENST00000498284 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.69
PTPRK-215ENST00000498284 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
PTPRK-215ENST00000498284 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
PTPRK-215ENST00000498284 PCDH10Q9P2E7 1040 aa10.74□□□□□ -0.69
PTPRK-215ENST00000498284 KIF3CO14782 793 aa10.73□□□□□ -0.69
PTPRK-215ENST00000498284 E2F4Q16254 413 aa10.73□□□□□ -0.69
PTPRK-215ENST00000498284 PPP1R15BQ5SWA1 713 aa10.73□□□□□ -0.69
PTPRK-215ENST00000498284 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
PTPRK-215ENST00000498284 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
PTPRK-215ENST00000498284 DSG2Q14126 1118 aa10.72□□□□□ -0.69
PTPRK-215ENST00000498284 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.72□□□□□ -0.69
PTPRK-215ENST00000498284 FOXK1P85037 733 aa10.71□□□□□ -0.69
PTPRK-215ENST00000498284 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
PTPRK-215ENST00000498284 BCANQ96GW7 911 aa10.7□□□□□ -0.7
PTPRK-215ENST00000498284 CAMK2BQ13554 666 aa10.67□□□□□ -0.7
PTPRK-215ENST00000498284 PLPP6Q8IY26 295 aa10.67□□□□□ -0.7
PTPRK-215ENST00000498284 ST18O60284 1047 aa10.66□□□□□ -0.7
PTPRK-215ENST00000498284 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
PTPRK-215ENST00000498284 NBR1Q14596 966 aa10.64□□□□□ -0.71
PTPRK-215ENST00000498284 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
PTPRK-215ENST00000498284 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
PTPRK-215ENST00000498284 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
PTPRK-215ENST00000498284 DPYSL4O14531 572 aa10.55□□□□□ -0.72
PTPRK-215ENST00000498284 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRK-215ENST00000498284 OXER1Q8TDS5 423 aa10.53□□□□□ -0.72
PTPRK-215ENST00000498284 SLC34A2O95436 690 aa10.52□□□□□ -0.73
PTPRK-215ENST00000498284 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
PTPRK-215ENST00000498284 SNPHO15079 494 aa10.5□□□□□ -0.73
PTPRK-215ENST00000498284 PTCD2Q8WV60 388 aaKnown RBP10.5□□□□□ -0.73
PTPRK-215ENST00000498284 SPDYE16A6NNV3 312 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-215ENST00000498284 SEMA3EO15041 775 aa10.49□□□□□ -0.73
PTPRK-215ENST00000498284 TBC1D12O60347 775 aa10.48□□□□□ -0.73
PTPRK-215ENST00000498284 PDIA6Q15084 440 aa10.47□□□□□ -0.73
PTPRK-215ENST00000498284 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
PTPRK-215ENST00000498284 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-215ENST00000498284 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
PTPRK-215ENST00000498284 MARVELD3Q96A59 401 aa10.46□□□□□ -0.73
PTPRK-215ENST00000498284 PCDHGA4Q9Y5G9 962 aa10.44□□□□□ -0.74
PTPRK-215ENST00000498284 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
PTPRK-215ENST00000498284 EVI5O60447 810 aa10.42□□□□□ -0.74
PTPRK-215ENST00000498284 TULP1O00294 542 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-215ENST00000498284 ZNF316A6NFI3 1004 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-215ENST00000498284 MLLT3P42568 568 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-215ENST00000498284 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
PTPRK-215ENST00000498284 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
PTPRK-215ENST00000498284 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
PTPRK-215ENST00000498284 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
PTPRK-215ENST00000498284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRK-215ENST00000498284 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-215ENST00000498284 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
PTPRK-215ENST00000498284 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
PTPRK-215ENST00000498284 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
PTPRK-215ENST00000498284 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
PTPRK-215ENST00000498284 PTGER2P43116 358 aa10.36□□□□□ -0.75
PTPRK-215ENST00000498284 KHSRPQ92945 711 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRK-215ENST00000498284 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
PTPRK-215ENST00000498284 EMP3P54852 163 aa10.35□□□□□ -0.75
PTPRK-215ENST00000498284 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
PTPRK-215ENST00000498284 NUDT7P0C024 238 aa10.34□□□□□ -0.75
PTPRK-215ENST00000498284 DDX12PQ92771 950 aa10.34□□□□□ -0.75
PTPRK-215ENST00000498284 SPNS2Q8IVW8 549 aa10.33□□□□□ -0.76
PTPRK-215ENST00000498284 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
PTPRK-215ENST00000498284 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
PTPRK-215ENST00000498284 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
PTPRK-215ENST00000498284 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
PTPRK-215ENST00000498284 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
PTPRK-215ENST00000498284 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
PTPRK-215ENST00000498284 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
PTPRK-215ENST00000498284 FAM205CA6NFA0 338 aa10.29□□□□□ -0.76
PTPRK-215ENST00000498284 OSBPP22059 807 aa10.29□□□□□ -0.76
PTPRK-215ENST00000498284 PHF14O94880 888 aa10.28□□□□□ -0.76
PTPRK-215ENST00000498284 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-215ENST00000498284 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
PTPRK-215ENST00000498284 EPAS1Q99814 870 aa10.26□□□□□ -0.77
PTPRK-215ENST00000498284 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
PTPRK-215ENST00000498284 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
PTPRK-215ENST00000498284 PRIM1P49642 420 aaKnown RBP10.25□□□□□ -0.77
PTPRK-215ENST00000498284 FOSBP53539 338 aa10.25□□□□□ -0.77
PTPRK-215ENST00000498284 TYW1BQ6NUM6 668 aa10.24□□□□□ -0.77
PTPRK-215ENST00000498284 ZNF454Q8N9F8 522 aa10.24□□□□□ -0.77
PTPRK-215ENST00000498284 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
PTPRK-215ENST00000498284 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
PTPRK-215ENST00000498284 FBXW7Q969H0 707 aa10.22□□□□□ -0.77
PTPRK-215ENST00000498284 NUTM2FA1L443 756 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms