RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ZFYVE16Q7Z3T8 1539 aa30.51■■■□□ 2.47
PRKCB-209ENST00000498058 TROQ12816 1431 aaPredicted RBP30.49■■■□□ 2.47
PRKCB-209ENST00000498058 POGZQ7Z3K3 1410 aa30.49■■■□□ 2.47
PRKCB-209ENST00000498058 RIMS1Q86UR5 1692 aaKnown RBP30.48■■■□□ 2.47
PRKCB-209ENST00000498058 CDK11AQ9UQ88 783 aaPredicted RBP30.46■■■□□ 2.47
PRKCB-209ENST00000498058 MAGI2Q86UL8 1455 aa30.45■■■□□ 2.47
PRKCB-209ENST00000498058 EFCAB2Q5VUJ9 269 aa30.44■■■□□ 2.46
PRKCB-209ENST00000498058 PCF11O94913 1555 aaKnown RBP30.44■■■□□ 2.46
PRKCB-209ENST00000498058 CASKIN1Q8WXD9 1431 aa30.39■■■□□ 2.46
PRKCB-209ENST00000498058 ARHGAP5Q13017 1502 aa30.37■■■□□ 2.45
PRKCB-209ENST00000498058 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
PRKCB-209ENST00000498058 CLIP1P30622 1438 aa30.37■■■□□ 2.45
PRKCB-209ENST00000498058 LMTK3Q96Q04 1460 aa30.36■■■□□ 2.45
PRKCB-209ENST00000498058 MLECQ14165 292 aa30.34■■■□□ 2.45
PRKCB-209ENST00000498058 ATP10AO60312 1499 aa30.32■■■□□ 2.44
PRKCB-209ENST00000498058 AFAP1Q8N556 730 aa30.32■■■□□ 2.44
PRKCB-209ENST00000498058 CCDC18Q5T9S5 1454 aa30.31■■■□□ 2.44
PRKCB-209ENST00000498058 KDM5CP41229 1560 aa30.3■■■□□ 2.44
PRKCB-209ENST00000498058 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
PRKCB-209ENST00000498058 ZNF518AQ6AHZ1 1483 aa30.29■■■□□ 2.44
PRKCB-209ENST00000498058 C9orf84Q5VXU9 1444 aa30.29■■■□□ 2.44
PRKCB-209ENST00000498058 FER1L4A9Z1Z3 1794 aa30.28■■■□□ 2.44
PRKCB-209ENST00000498058 PREX2Q70Z35 1606 aa30.28■■■□□ 2.44
PRKCB-209ENST00000498058 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
PRKCB-209ENST00000498058 FYCO1Q9BQS8 1478 aa30.25■■■□□ 2.43
PRKCB-209ENST00000498058 CDC42BPAQ5VT25 1732 aa30.23■■■□□ 2.43
PRKCB-209ENST00000498058 TRAPPC8Q9Y2L5 1435 aa30.22■■■□□ 2.43
PRKCB-209ENST00000498058 DIP2CQ9Y2E4 1556 aa30.22■■■□□ 2.43
PRKCB-209ENST00000498058 ABCC1P33527 1531 aa30.22■■■□□ 2.43
PRKCB-209ENST00000498058 HSPA2P54652 639 aa30.21■■■□□ 2.43
PRKCB-209ENST00000498058 ITSN2Q9NZM3 1697 aa30.19■■■□□ 2.42
PRKCB-209ENST00000498058 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
PRKCB-209ENST00000498058 MLH3Q9UHC1 1453 aa30.16■■■□□ 2.42
PRKCB-209ENST00000498058 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
PRKCB-209ENST00000498058 MYT1LQ9UL68 1186 aa30.13■■■□□ 2.41
PRKCB-209ENST00000498058 REREQ9P2R6 1566 aa30.12■■■□□ 2.41
PRKCB-209ENST00000498058 KIDINS220Q9ULH0 1771 aa30.1■■■□□ 2.41
PRKCB-209ENST00000498058 GPATCH8Q9UKJ3 1502 aaKnown RBP30.1■■■□□ 2.41
PRKCB-209ENST00000498058 SAMD9LQ8IVG5 1584 aa30.1■■■□□ 2.41
PRKCB-209ENST00000498058 ZNF777Q9ULD5 760 aaPredicted RBP30.05■■■□□ 2.4
PRKCB-209ENST00000498058 AGLP35573 1532 aa30.03■■■□□ 2.4
PRKCB-209ENST00000498058 SYCP2Q9BX26 1530 aa30.02■■■□□ 2.4
PRKCB-209ENST00000498058 FBXO41Q8TF61 875 aa30.02■■■□□ 2.4
PRKCB-209ENST00000498058 PREX1Q8TCU6 1659 aa30.01■■■□□ 2.4
PRKCB-209ENST00000498058 HNRNPMP52272 730 aaKnown RBP eCLIP29.99■■■□□ 2.397e-7■■■■□ 22.6
PRKCB-209ENST00000498058 C3P01024 1663 aa29.97■■■□□ 2.39
PRKCB-209ENST00000498058 MTUS2Q5JR59 1369 aa29.93■■■□□ 2.38
PRKCB-209ENST00000498058 CCNB3Q8WWL7 1395 aa29.93■■■□□ 2.38
PRKCB-209ENST00000498058 CFDP1Q9UEE9 299 aaPredicted RBP29.93■■■□□ 2.38
PRKCB-209ENST00000498058 CEP162Q5TB80 1403 aa29.93■■■□□ 2.38
PRKCB-209ENST00000498058 SETD1BQ9UPS6 1966 aaKnown RBP29.93■■■□□ 2.38
PRKCB-209ENST00000498058 KIAA1107Q9UPP5 1409 aa29.91■■■□□ 2.38
PRKCB-209ENST00000498058 SPAG9O60271 1321 aaKnown RBP29.91■■■□□ 2.38
PRKCB-209ENST00000498058 TIAM1Q13009 1591 aa29.9■■■□□ 2.38
PRKCB-209ENST00000498058 STRCQ7RTU9 1775 aa29.89■■■□□ 2.38
PRKCB-209ENST00000498058 ZNF644Q9H582 1327 aaPredicted RBP29.88■■■□□ 2.37
PRKCB-209ENST00000498058 ATP7AQ04656 1500 aa29.87■■■□□ 2.37
PRKCB-209ENST00000498058 INO80Q9ULG1 1556 aaPredicted RBP29.87■■■□□ 2.37
PRKCB-209ENST00000498058 SUPT6HQ7KZ85 1726 aaKnown RBP29.87■■■□□ 2.37
PRKCB-209ENST00000498058 UHRF1BP1Q6BDS2 1440 aa29.87■■■□□ 2.37
PRKCB-209ENST00000498058 PLEKHH2Q8IVE3 1493 aa29.86■■■□□ 2.37
PRKCB-209ENST00000498058 EHBP1L1Q8N3D4 1523 aa29.86■■■□□ 2.37
PRKCB-209ENST00000498058 PLXNC1O60486 1568 aa29.81■■■□□ 2.36
PRKCB-209ENST00000498058 ESF1Q9H501 851 aaKnown RBP29.81■■■□□ 2.36
PRKCB-209ENST00000498058 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
PRKCB-209ENST00000498058 CNTLNQ9NXG0 1405 aa29.79■■■□□ 2.36
PRKCB-209ENST00000498058 A2MP01023 1474 aa29.79■■■□□ 2.36
PRKCB-209ENST00000498058 CERKQ8TCT0 537 aa29.78■■■□□ 2.36
PRKCB-209ENST00000498058 MROH2AA6NES4 1674 aa29.76■■■□□ 2.36
PRKCB-209ENST00000498058 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
PRKCB-209ENST00000498058 ZMYM3Q14202 1370 aa29.74■■■□□ 2.35
PRKCB-209ENST00000498058 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
PRKCB-209ENST00000498058 NCOA2Q15596 1464 aa29.71■■■□□ 2.35
PRKCB-209ENST00000498058 ADGBQ8N7X0 1667 aa29.7■■■□□ 2.35
PRKCB-209ENST00000498058 GGT6Q6P531 493 aa29.67■■■□□ 2.34
PRKCB-209ENST00000498058 NPATQ14207 1427 aa29.67■■■□□ 2.34
PRKCB-209ENST00000498058 DMRT2Q9Y5R5 561 aa29.66■■■□□ 2.34
PRKCB-209ENST00000498058 RTEL1-TNFRSF6BF6WH68 1400 aa29.64■■■□□ 2.34
PRKCB-209ENST00000498058 CAMSAP2Q08AD1 1489 aa29.64■■■□□ 2.34
PRKCB-209ENST00000498058 PTPRTO14522 1441 aa29.63■■■□□ 2.33
PRKCB-209ENST00000498058 NCOA1Q15788 1441 aa29.63■■■□□ 2.33
PRKCB-209ENST00000498058 PTPRKQ15262 1439 aa29.62■■■□□ 2.33
PRKCB-209ENST00000498058 VPS8Q8N3P4 1428 aa29.61■■■□□ 2.33
PRKCB-209ENST00000498058 CAMSAP1Q5T5Y3 1602 aa29.6■■■□□ 2.33
PRKCB-209ENST00000498058 DHX29Q7Z478 1369 aaKnown RBP29.59■■■□□ 2.33
PRKCB-209ENST00000498058 CCDC141Q6ZP82 1450 aa29.59■■■□□ 2.33
PRKCB-209ENST00000498058 MYO3AQ8NEV4 1616 aa29.57■■■□□ 2.32
PRKCB-209ENST00000498058 LRRC9Q6ZRR7 1453 aa29.56■■■□□ 2.32
PRKCB-209ENST00000498058 ZNF142P52746 1687 aaPredicted RBP29.54■■■□□ 2.32
PRKCB-209ENST00000498058 LTBP4Q8N2S1 1624 aa29.53■■■□□ 2.32
PRKCB-209ENST00000498058 KANK4Q5T7N3 995 aaPredicted RBP29.53■■■□□ 2.32
PRKCB-209ENST00000498058 PPP6R1Q9UPN7 881 aa29.53■■■□□ 2.32
PRKCB-209ENST00000498058 ARHGEF5Q12774 1597 aa29.51■■■□□ 2.31
PRKCB-209ENST00000498058 NCKAP5LQ9HCH0 1330 aa29.5■■■□□ 2.31
PRKCB-209ENST00000498058 KIF3BO15066 747 aa29.5■■■□□ 2.31
PRKCB-209ENST00000498058 CEP170BQ9Y4F5 1589 aaPredicted RBP29.5■■■□□ 2.31
PRKCB-209ENST00000498058 RSPH4AQ5TD94 716 aa29.48■■■□□ 2.31
PRKCB-209ENST00000498058 FBXO31Q5XUX0 539 aaPredicted RBP29.44■■■□□ 2.3
PRKCB-209ENST00000498058 MAP3K1Q13233 1512 aa29.44■■■□□ 2.3
PRKCB-209ENST00000498058 PLA2R1Q13018 1463 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms