RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-210ENST00000497730 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
TRA2A-210ENST00000497730 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
TRA2A-210ENST00000497730 PDE4AP27815 886 aa13.66□□□□□ -0.22
TRA2A-210ENST00000497730 BCANQ96GW7 911 aa13.66□□□□□ -0.22
TRA2A-210ENST00000497730 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
TRA2A-210ENST00000497730 POTEMA6NI47 508 aa13.63□□□□□ -0.23
TRA2A-210ENST00000497730 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
TRA2A-210ENST00000497730 DDX27Q96GQ7 796 aaKnown RBP13.6□□□□□ -0.23
TRA2A-210ENST00000497730 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
TRA2A-210ENST00000497730 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
TRA2A-210ENST00000497730 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
TRA2A-210ENST00000497730 TMC2Q8TDI7 906 aa13.58□□□□□ -0.24
TRA2A-210ENST00000497730 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
TRA2A-210ENST00000497730 NBR1Q14596 966 aa13.56□□□□□ -0.24
TRA2A-210ENST00000497730 MFSD10Q14728 455 aa13.56□□□□□ -0.24
TRA2A-210ENST00000497730 KCNV2Q8TDN2 545 aa13.56□□□□□ -0.24
TRA2A-210ENST00000497730 E2F4Q16254 413 aa13.54□□□□□ -0.24
TRA2A-210ENST00000497730 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
TRA2A-210ENST00000497730 PPP1R15BQ5SWA1 713 aa13.52□□□□□ -0.25
TRA2A-210ENST00000497730 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
TRA2A-210ENST00000497730 DSG2Q14126 1118 aa13.5□□□□□ -0.25
TRA2A-210ENST00000497730 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
TRA2A-210ENST00000497730 KIF3CO14782 793 aa13.46□□□□□ -0.25
TRA2A-210ENST00000497730 FOXK1P85037 733 aa13.46□□□□□ -0.25
TRA2A-210ENST00000497730 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
TRA2A-210ENST00000497730 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
TRA2A-210ENST00000497730 LCE2DQ5TA82 110 aaPredicted RBP13.43□□□□□ -0.26
TRA2A-210ENST00000497730 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.43□□□□□ -0.26
TRA2A-210ENST00000497730 CAMK2BQ13554 666 aa13.42□□□□□ -0.26
TRA2A-210ENST00000497730 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
TRA2A-210ENST00000497730 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
TRA2A-210ENST00000497730 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
TRA2A-210ENST00000497730 DPYSL4O14531 572 aa13.32□□□□□ -0.28
TRA2A-210ENST00000497730 SCUBE2Q9NQ36 999 aa13.32□□□□□ -0.28
TRA2A-210ENST00000497730 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-210ENST00000497730 UPF1Q92900 1129 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRA2A-210ENST00000497730 SEMA3EO15041 775 aa13.29□□□□□ -0.28
TRA2A-210ENST00000497730 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
TRA2A-210ENST00000497730 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
TRA2A-210ENST00000497730 FAM163AQ96GL9 167 aaPredicted RBP13.24□□□□□ -0.29
TRA2A-210ENST00000497730 TULP1O00294 542 aaPredicted RBP13.22□□□□□ -0.29
TRA2A-210ENST00000497730 OXER1Q8TDS5 423 aa13.22□□□□□ -0.29
TRA2A-210ENST00000497730 TESPA1A2RU30 521 aaPredicted RBP13.21□□□□□ -0.29
TRA2A-210ENST00000497730 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
TRA2A-210ENST00000497730 PDIA6Q15084 440 aa13.2□□□□□ -0.3
TRA2A-210ENST00000497730 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
TRA2A-210ENST00000497730 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-210ENST00000497730 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
TRA2A-210ENST00000497730 TBC1D12O60347 775 aa13.17□□□□□ -0.3
TRA2A-210ENST00000497730 SLC34A2O95436 690 aa13.17□□□□□ -0.3
TRA2A-210ENST00000497730 MLLT3P42568 568 aaPredicted RBP13.15□□□□□ -0.3
TRA2A-210ENST00000497730 SMYD5Q6GMV2 418 aa13.15□□□□□ -0.3
TRA2A-210ENST00000497730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRA2A-210ENST00000497730 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
TRA2A-210ENST00000497730 EVI5O60447 810 aa13.13□□□□□ -0.31
TRA2A-210ENST00000497730 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
TRA2A-210ENST00000497730 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
TRA2A-210ENST00000497730 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
TRA2A-210ENST00000497730 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
TRA2A-210ENST00000497730 GRXCR2A6NFK2 248 aa13.09□□□□□ -0.31
TRA2A-210ENST00000497730 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
TRA2A-210ENST00000497730 DDX12PQ92771 950 aa13.07□□□□□ -0.32
TRA2A-210ENST00000497730 ZNF710Q8N1W2 664 aa13.06□□□□□ -0.32
TRA2A-210ENST00000497730 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
TRA2A-210ENST00000497730 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
TRA2A-210ENST00000497730 SNPHO15079 494 aa13.03□□□□□ -0.32
TRA2A-210ENST00000497730 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.324e-13■■■□□ 15.6
TRA2A-210ENST00000497730 PTGER2P43116 358 aa13.02□□□□□ -0.33
TRA2A-210ENST00000497730 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
TRA2A-210ENST00000497730 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
TRA2A-210ENST00000497730 NUDT7P0C024 238 aa13□□□□□ -0.33
TRA2A-210ENST00000497730 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
TRA2A-210ENST00000497730 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
TRA2A-210ENST00000497730 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
TRA2A-210ENST00000497730 ST18O60284 1047 aa12.96□□□□□ -0.33
TRA2A-210ENST00000497730 OSBPP22059 807 aa12.96□□□□□ -0.33
TRA2A-210ENST00000497730 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
TRA2A-210ENST00000497730 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
TRA2A-210ENST00000497730 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
TRA2A-210ENST00000497730 PHF14O94880 888 aa12.92□□□□□ -0.34
TRA2A-210ENST00000497730 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
TRA2A-210ENST00000497730 PCDHGA10Q9Y5H3 936 aa12.91□□□□□ -0.34
TRA2A-210ENST00000497730 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
TRA2A-210ENST00000497730 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
TRA2A-210ENST00000497730 EPAS1Q99814 870 aa12.9□□□□□ -0.34
TRA2A-210ENST00000497730 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
TRA2A-210ENST00000497730 ZNF454Q8N9F8 522 aa12.89□□□□□ -0.35
TRA2A-210ENST00000497730 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
TRA2A-210ENST00000497730 LHX6Q9UPM6 363 aa12.88□□□□□ -0.35
TRA2A-210ENST00000497730 MAP3K7O43318 606 aa12.87□□□□□ -0.35
TRA2A-210ENST00000497730 FOSBP53539 338 aa12.87□□□□□ -0.35
TRA2A-210ENST00000497730 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-210ENST00000497730 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
TRA2A-210ENST00000497730 ZMYND10O75800 440 aa12.84□□□□□ -0.35
TRA2A-210ENST00000497730 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
TRA2A-210ENST00000497730 GPR37O15354 613 aa12.81□□□□□ -0.36
TRA2A-210ENST00000497730 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
TRA2A-210ENST00000497730 FCHSD2O94868 740 aa12.8□□□□□ -0.36
TRA2A-210ENST00000497730 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
TRA2A-210ENST00000497730 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms