RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 SUPT6HQ7KZ85 1726 aaKnown RBP25.47■■□□□ 1.67
FAM3A-220ENST00000497506 GPATCH8Q9UKJ3 1502 aaKnown RBP25.46■■□□□ 1.67
FAM3A-220ENST00000497506 AKNAQ7Z591 1439 aa25.46■■□□□ 1.67
FAM3A-220ENST00000497506 ARHGAP5Q13017 1502 aa25.44■■□□□ 1.66
FAM3A-220ENST00000497506 EFCAB2Q5VUJ9 269 aa25.44■■□□□ 1.66
FAM3A-220ENST00000497506 NCOA2Q15596 1464 aa25.44■■□□□ 1.66
FAM3A-220ENST00000497506 CCNB3Q8WWL7 1395 aa25.42■■□□□ 1.66
FAM3A-220ENST00000497506 ITSN2Q9NZM3 1697 aa25.37■■□□□ 1.65
FAM3A-220ENST00000497506 ADGRL1O94910 1474 aa25.37■■□□□ 1.65
FAM3A-220ENST00000497506 RAPGEF3O95398 923 aa25.34■■□□□ 1.65
FAM3A-220ENST00000497506 SCAPERQ9BY12 1400 aa25.34■■□□□ 1.65
FAM3A-220ENST00000497506 FRMPD1Q5SYB0 1578 aa25.34■■□□□ 1.65
FAM3A-220ENST00000497506 RICTORQ6R327 1708 aa25.34■■□□□ 1.65
FAM3A-220ENST00000497506 DENND4BO75064 1496 aaPredicted RBP25.34■■□□□ 1.65
FAM3A-220ENST00000497506 CFDP1Q9UEE9 299 aaPredicted RBP25.33■■□□□ 1.65
FAM3A-220ENST00000497506 SAMD9LQ8IVG5 1584 aa25.32■■□□□ 1.64
FAM3A-220ENST00000497506 ABCC1P33527 1531 aa25.3■■□□□ 1.64
FAM3A-220ENST00000497506 ZNF777Q9ULD5 760 aaPredicted RBP25.29■■□□□ 1.64
FAM3A-220ENST00000497506 ARHGEF12Q9NZN5 1544 aa25.28■■□□□ 1.64
FAM3A-220ENST00000497506 POGZQ7Z3K3 1410 aa25.28■■□□□ 1.64
FAM3A-220ENST00000497506 MYOM3Q5VTT5 1437 aa25.25■■□□□ 1.63
FAM3A-220ENST00000497506 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
FAM3A-220ENST00000497506 ZMYM4Q5VZL5 1548 aa25.23■■□□□ 1.63
FAM3A-220ENST00000497506 PLEKHH2Q8IVE3 1493 aa25.23■■□□□ 1.63
FAM3A-220ENST00000497506 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
FAM3A-220ENST00000497506 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
FAM3A-220ENST00000497506 ZNF518AQ6AHZ1 1483 aa25.21■■□□□ 1.63
FAM3A-220ENST00000497506 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
FAM3A-220ENST00000497506 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.62
FAM3A-220ENST00000497506 AFAP1Q8N556 730 aa25.2■■□□□ 1.62
FAM3A-220ENST00000497506 MIA2Q96PC5 1412 aa25.2■■□□□ 1.62
FAM3A-220ENST00000497506 KDM5CP41229 1560 aa25.19■■□□□ 1.62
FAM3A-220ENST00000497506 CAMSAP2Q08AD1 1489 aa25.19■■□□□ 1.62
FAM3A-220ENST00000497506 PPARGC1BQ86YN6 1023 aaKnown RBP25.18■■□□□ 1.62
FAM3A-220ENST00000497506 MBD5Q9P267 1494 aa25.16■■□□□ 1.62
FAM3A-220ENST00000497506 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
FAM3A-220ENST00000497506 FGD6Q6ZV73 1430 aa25.12■■□□□ 1.61
FAM3A-220ENST00000497506 YEATS2Q9ULM3 1422 aa25.12■■□□□ 1.61
FAM3A-220ENST00000497506 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
FAM3A-220ENST00000497506 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
FAM3A-220ENST00000497506 HECW2Q9P2P5 1572 aa25.11■■□□□ 1.61
FAM3A-220ENST00000497506 MLH3Q9UHC1 1453 aa25.11■■□□□ 1.61
FAM3A-220ENST00000497506 PTPN23Q9H3S7 1636 aa25.11■■□□□ 1.61
FAM3A-220ENST00000497506 ARHGEF5Q12774 1597 aa25.09■■□□□ 1.61
FAM3A-220ENST00000497506 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.6
FAM3A-220ENST00000497506 TCOF1Q13428 1488 aaKnown RBP25.07■■□□□ 1.6
FAM3A-220ENST00000497506 CCDC141Q6ZP82 1450 aa25.06■■□□□ 1.6
FAM3A-220ENST00000497506 RSPH4AQ5TD94 716 aa25.05■■□□□ 1.6
FAM3A-220ENST00000497506 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
FAM3A-220ENST00000497506 INO80Q9ULG1 1556 aaPredicted RBP25.04■■□□□ 1.6
FAM3A-220ENST00000497506 ABCA6Q8N139 1617 aa25.04■■□□□ 1.6
FAM3A-220ENST00000497506 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
FAM3A-220ENST00000497506 MYT1LQ9UL68 1186 aa25.03■■□□□ 1.6
FAM3A-220ENST00000497506 ATP10AO60312 1499 aa25.02■■□□□ 1.6
FAM3A-220ENST00000497506 ATP7AQ04656 1500 aa25.02■■□□□ 1.6
FAM3A-220ENST00000497506 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
FAM3A-220ENST00000497506 RTEL1-TNFRSF6BF6WH68 1400 aa24.98■■□□□ 1.59
FAM3A-220ENST00000497506 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
FAM3A-220ENST00000497506 DNMT1P26358 1616 aaKnown RBP24.96■■□□□ 1.59
FAM3A-220ENST00000497506 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
FAM3A-220ENST00000497506 ABCC5O15440 1437 aa24.95■■□□□ 1.59
FAM3A-220ENST00000497506 MAST1Q9Y2H9 1570 aa24.95■■□□□ 1.58
FAM3A-220ENST00000497506 CROCC2H7BZ55 1655 aa24.94■■□□□ 1.58
FAM3A-220ENST00000497506 TSPY4P0CV99 314 aa24.94■■□□□ 1.58
FAM3A-220ENST00000497506 TSPY10P0CW01 314 aa24.94■■□□□ 1.58
FAM3A-220ENST00000497506 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
FAM3A-220ENST00000497506 DAPK1P53355 1430 aa24.93■■□□□ 1.58
FAM3A-220ENST00000497506 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
FAM3A-220ENST00000497506 ARID4BQ4LE39 1312 aaPredicted RBP24.9■■□□□ 1.58
FAM3A-220ENST00000497506 KDM4FA0A1W2PPD8 638 aa24.9■■□□□ 1.58
FAM3A-220ENST00000497506 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
FAM3A-220ENST00000497506 RRBP1Q9P2E9 1410 aaKnown RBP24.89■■□□□ 1.58
FAM3A-220ENST00000497506 BCORL1Q5H9F3 1711 aa24.89■■□□□ 1.57
FAM3A-220ENST00000497506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.87■■□□□ 1.57
FAM3A-220ENST00000497506 A2MP01023 1474 aa24.87■■□□□ 1.57
FAM3A-220ENST00000497506 AGLP35573 1532 aa24.86■■□□□ 1.57
FAM3A-220ENST00000497506 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
FAM3A-220ENST00000497506 ADAMTSL3P82987 1691 aa24.85■■□□□ 1.57
FAM3A-220ENST00000497506 DHX29Q7Z478 1369 aaKnown RBP24.82■■□□□ 1.56
FAM3A-220ENST00000497506 PTPRKQ15262 1439 aa24.81■■□□□ 1.56
FAM3A-220ENST00000497506 CHIC2Q9UKJ5 165 aa24.8■■□□□ 1.56
FAM3A-220ENST00000497506 MLECQ14165 292 aa24.79■■□□□ 1.56
FAM3A-220ENST00000497506 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
FAM3A-220ENST00000497506 MADDQ8WXG6 1647 aa24.77■■□□□ 1.56
FAM3A-220ENST00000497506 NCOA1Q15788 1441 aa24.76■■□□□ 1.55
FAM3A-220ENST00000497506 ANKRD30AQ9BXX3 1397 aa24.75■■□□□ 1.55
FAM3A-220ENST00000497506 KIF15Q9NS87 1388 aa24.75■■□□□ 1.55
FAM3A-220ENST00000497506 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
FAM3A-220ENST00000497506 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
FAM3A-220ENST00000497506 ITGAEP38570 1179 aa24.72■■□□□ 1.55
FAM3A-220ENST00000497506 FER1L4A9Z1Z3 1794 aa24.72■■□□□ 1.55
FAM3A-220ENST00000497506 RIMS1Q86UR5 1692 aaKnown RBP24.7■■□□□ 1.54
FAM3A-220ENST00000497506 EIF2AK4Q9P2K8 1649 aaKnown RBP24.69■■□□□ 1.54
FAM3A-220ENST00000497506 KIF3BO15066 747 aa24.69■■□□□ 1.54
FAM3A-220ENST00000497506 ROCK1Q13464 1354 aa24.68■■□□□ 1.54
FAM3A-220ENST00000497506 ERBINQ96RT1 1412 aa24.67■■□□□ 1.54
FAM3A-220ENST00000497506 GGT6Q6P531 493 aa24.66■■□□□ 1.54
FAM3A-220ENST00000497506 PTPRMP28827 1452 aa24.65■■□□□ 1.54
FAM3A-220ENST00000497506 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
FAM3A-220ENST00000497506 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms