RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
SF1-219ENST00000496969 EFCAB2Q5VUJ9 269 aa13.51□□□□□ -0.25
SF1-219ENST00000496969 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
SF1-219ENST00000496969 POGZQ7Z3K3 1410 aa13.5□□□□□ -0.25
SF1-219ENST00000496969 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
SF1-219ENST00000496969 CDC42BPAQ5VT25 1732 aa13.49□□□□□ -0.25
SF1-219ENST00000496969 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
SF1-219ENST00000496969 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
SF1-219ENST00000496969 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
SF1-219ENST00000496969 ZNF518AQ6AHZ1 1483 aa13.47□□□□□ -0.25
SF1-219ENST00000496969 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
SF1-219ENST00000496969 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
SF1-219ENST00000496969 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
SF1-219ENST00000496969 ABCC1P33527 1531 aa13.45□□□□□ -0.26
SF1-219ENST00000496969 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
SF1-219ENST00000496969 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
SF1-219ENST00000496969 KDM5CP41229 1560 aa13.44□□□□□ -0.26
SF1-219ENST00000496969 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
SF1-219ENST00000496969 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
SF1-219ENST00000496969 C9orf84Q5VXU9 1444 aa13.41□□□□□ -0.26
SF1-219ENST00000496969 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
SF1-219ENST00000496969 SUPT6HQ7KZ85 1726 aaKnown RBP13.41□□□□□ -0.26
SF1-219ENST00000496969 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
SF1-219ENST00000496969 RIMS1Q86UR5 1692 aaKnown RBP13.4□□□□□ -0.26
SF1-219ENST00000496969 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
SF1-219ENST00000496969 CCNB3Q8WWL7 1395 aa13.4□□□□□ -0.26
SF1-219ENST00000496969 TIAM1Q13009 1591 aa13.4□□□□□ -0.26
SF1-219ENST00000496969 GPATCH8Q9UKJ3 1502 aaKnown RBP13.39□□□□□ -0.27
SF1-219ENST00000496969 LOC105371045A0A1W2PR82 267 aa13.39□□□□□ -0.27
SF1-219ENST00000496969 ATP10AO60312 1499 aa13.39□□□□□ -0.27
SF1-219ENST00000496969 PLEKHH2Q8IVE3 1493 aa13.39□□□□□ -0.27
SF1-219ENST00000496969 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
SF1-219ENST00000496969 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
SF1-219ENST00000496969 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
SF1-219ENST00000496969 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
SF1-219ENST00000496969 SYCP2Q9BX26 1530 aa13.38□□□□□ -0.27
SF1-219ENST00000496969 PTPRMP28827 1452 aa13.37□□□□□ -0.27
SF1-219ENST00000496969 ZNF777Q9ULD5 760 aaPredicted RBP13.37□□□□□ -0.27
SF1-219ENST00000496969 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
SF1-219ENST00000496969 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
SF1-219ENST00000496969 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
SF1-219ENST00000496969 AFAP1Q8N556 730 aa13.35□□□□□ -0.27
SF1-219ENST00000496969 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
SF1-219ENST00000496969 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
SF1-219ENST00000496969 KIDINS220Q9ULH0 1771 aa13.33□□□□□ -0.28
SF1-219ENST00000496969 KIAA1107Q9UPP5 1409 aa13.32□□□□□ -0.28
SF1-219ENST00000496969 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
SF1-219ENST00000496969 MLECQ14165 292 aa13.32□□□□□ -0.28
SF1-219ENST00000496969 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
SF1-219ENST00000496969 ATP7AQ04656 1500 aa13.31□□□□□ -0.28
SF1-219ENST00000496969 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
SF1-219ENST00000496969 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
SF1-219ENST00000496969 AGLP35573 1532 aa13.29□□□□□ -0.28
SF1-219ENST00000496969 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
SF1-219ENST00000496969 HNRNPMP52272 730 aaKnown RBP eCLIP13.28□□□□□ -0.28
SF1-219ENST00000496969 APLP2Q06481 763 aa13.28□□□□□ -0.28
SF1-219ENST00000496969 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
SF1-219ENST00000496969 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
SF1-219ENST00000496969 CAMSAP2Q08AD1 1489 aa13.27□□□□□ -0.29
SF1-219ENST00000496969 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
SF1-219ENST00000496969 ESF1Q9H501 851 aaKnown RBP13.25□□□□□ -0.29
SF1-219ENST00000496969 PREX1Q8TCU6 1659 aa13.24□□□□□ -0.29
SF1-219ENST00000496969 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
SF1-219ENST00000496969 A2MP01023 1474 aa13.23□□□□□ -0.29
SF1-219ENST00000496969 ARHGEF5Q12774 1597 aa13.23□□□□□ -0.29
SF1-219ENST00000496969 MBD5Q9P267 1494 aa13.23□□□□□ -0.29
SF1-219ENST00000496969 ZNF644Q9H582 1327 aaPredicted RBP13.22□□□□□ -0.29
SF1-219ENST00000496969 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
SF1-219ENST00000496969 MROH2AA6NES4 1674 aa13.21□□□□□ -0.29
SF1-219ENST00000496969 C3P01024 1663 aa13.21□□□□□ -0.29
SF1-219ENST00000496969 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.3
SF1-219ENST00000496969 CNTLNQ9NXG0 1405 aa13.21□□□□□ -0.3
SF1-219ENST00000496969 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
SF1-219ENST00000496969 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
SF1-219ENST00000496969 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
SF1-219ENST00000496969 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
SF1-219ENST00000496969 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
SF1-219ENST00000496969 MAST1Q9Y2H9 1570 aa13.17□□□□□ -0.3
SF1-219ENST00000496969 UHRF1BP1Q6BDS2 1440 aa13.16□□□□□ -0.3
SF1-219ENST00000496969 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
SF1-219ENST00000496969 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
SF1-219ENST00000496969 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
SF1-219ENST00000496969 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.31
SF1-219ENST00000496969 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
SF1-219ENST00000496969 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
SF1-219ENST00000496969 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
SF1-219ENST00000496969 GGT6Q6P531 493 aa13.12□□□□□ -0.31
SF1-219ENST00000496969 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
SF1-219ENST00000496969 KDM5DQ9BY66 1539 aa13.11□□□□□ -0.31
SF1-219ENST00000496969 NPATQ14207 1427 aa13.11□□□□□ -0.31
SF1-219ENST00000496969 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
SF1-219ENST00000496969 DNMT1P26358 1616 aaKnown RBP13.1□□□□□ -0.31
SF1-219ENST00000496969 HSPA2P54652 639 aa13.1□□□□□ -0.31
SF1-219ENST00000496969 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
SF1-219ENST00000496969 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
SF1-219ENST00000496969 SETD1BQ9UPS6 1966 aaKnown RBP13.1□□□□□ -0.31
SF1-219ENST00000496969 MYO3AQ8NEV4 1616 aa13.1□□□□□ -0.31
SF1-219ENST00000496969 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
SF1-219ENST00000496969 ZC3H13Q5T200 1668 aaKnown RBP13.09□□□□□ -0.31
SF1-219ENST00000496969 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms