RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
TRIM4-205ENST00000496896 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
TRIM4-205ENST00000496896 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
TRIM4-205ENST00000496896 PTGER2P43116 358 aa12.39□□□□□ -0.43
TRIM4-205ENST00000496896 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
TRIM4-205ENST00000496896 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
TRIM4-205ENST00000496896 STK25O00506 426 aa12.36□□□□□ -0.43
TRIM4-205ENST00000496896 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
TRIM4-205ENST00000496896 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
TRIM4-205ENST00000496896 TMEM92Q6UXU6 159 aa12.35□□□□□ -0.43
TRIM4-205ENST00000496896 GPR153Q6NV75 609 aa12.34□□□□□ -0.43
TRIM4-205ENST00000496896 SOX12O15370 315 aa12.33□□□□□ -0.44
TRIM4-205ENST00000496896 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
TRIM4-205ENST00000496896 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
TRIM4-205ENST00000496896 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
TRIM4-205ENST00000496896 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
TRIM4-205ENST00000496896 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
TRIM4-205ENST00000496896 ARSIQ5FYB1 569 aa12.24□□□□□ -0.45
TRIM4-205ENST00000496896 NLRP6P59044 892 aa12.22□□□□□ -0.45
TRIM4-205ENST00000496896 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
TRIM4-205ENST00000496896 LSM11P83369 360 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIM4-205ENST00000496896 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
TRIM4-205ENST00000496896 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
TRIM4-205ENST00000496896 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
TRIM4-205ENST00000496896 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
TRIM4-205ENST00000496896 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
TRIM4-205ENST00000496896 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRIM4-205ENST00000496896 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
TRIM4-205ENST00000496896 PBX2P40425 430 aa12.11□□□□□ -0.47
TRIM4-205ENST00000496896 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
TRIM4-205ENST00000496896 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
TRIM4-205ENST00000496896 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
TRIM4-205ENST00000496896 NUDT7P0C024 238 aa12.04□□□□□ -0.48
TRIM4-205ENST00000496896 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
TRIM4-205ENST00000496896 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
TRIM4-205ENST00000496896 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
TRIM4-205ENST00000496896 LHX6Q9UPM6 363 aa12□□□□□ -0.49
TRIM4-205ENST00000496896 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
TRIM4-205ENST00000496896 C2orf72A6NCS6 295 aa11.98□□□□□ -0.49
TRIM4-205ENST00000496896 KIF3CO14782 793 aa11.98□□□□□ -0.49
TRIM4-205ENST00000496896 PPP1R37O75864 691 aa11.97□□□□□ -0.49
TRIM4-205ENST00000496896 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
TRIM4-205ENST00000496896 SLC34A2O95436 690 aa11.94□□□□□ -0.5
TRIM4-205ENST00000496896 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
TRIM4-205ENST00000496896 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
TRIM4-205ENST00000496896 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
TRIM4-205ENST00000496896 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
TRIM4-205ENST00000496896 TK2O00142 265 aa11.86□□□□□ -0.51
TRIM4-205ENST00000496896 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
TRIM4-205ENST00000496896 TMC2Q8TDI7 906 aa11.86□□□□□ -0.51
TRIM4-205ENST00000496896 HRO43593 1189 aa11.82□□□□□ -0.52
TRIM4-205ENST00000496896 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
TRIM4-205ENST00000496896 KCTD12Q96CX2 325 aaKnown RBP11.79□□□□□ -0.52
TRIM4-205ENST00000496896 PSEN2P49810 448 aa11.78□□□□□ -0.52
TRIM4-205ENST00000496896 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
TRIM4-205ENST00000496896 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
TRIM4-205ENST00000496896 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
TRIM4-205ENST00000496896 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
TRIM4-205ENST00000496896 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
TRIM4-205ENST00000496896 FOXK1P85037 733 aa11.74□□□□□ -0.53
TRIM4-205ENST00000496896 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
TRIM4-205ENST00000496896 PTCD2Q8WV60 388 aaKnown RBP11.73□□□□□ -0.53
TRIM4-205ENST00000496896 PDE4AP27815 886 aa11.72□□□□□ -0.53
TRIM4-205ENST00000496896 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
TRIM4-205ENST00000496896 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
TRIM4-205ENST00000496896 RGS20O76081 388 aa11.7□□□□□ -0.54
TRIM4-205ENST00000496896 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
TRIM4-205ENST00000496896 DSG2Q14126 1118 aa11.67□□□□□ -0.54
TRIM4-205ENST00000496896 PTPN5P54829 565 aa11.66□□□□□ -0.54
TRIM4-205ENST00000496896 MFSD10Q14728 455 aa11.66□□□□□ -0.54
TRIM4-205ENST00000496896 CADPS2Q86UW7 1296 aa11.66□□□□□ -0.54
TRIM4-205ENST00000496896 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
TRIM4-205ENST00000496896 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
TRIM4-205ENST00000496896 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
TRIM4-205ENST00000496896 IRX2Q9BZI1 471 aaPredicted RBP11.65□□□□□ -0.54
TRIM4-205ENST00000496896 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
TRIM4-205ENST00000496896 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
TRIM4-205ENST00000496896 TBC1D12O60347 775 aa11.62□□□□□ -0.55
TRIM4-205ENST00000496896 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
TRIM4-205ENST00000496896 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
TRIM4-205ENST00000496896 VPS9D1Q9Y2B5 631 aa11.61□□□□□ -0.55
TRIM4-205ENST00000496896 A0A0G2JS52 829 aa11.58□□□□□ -0.56
TRIM4-205ENST00000496896 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
TRIM4-205ENST00000496896 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
TRIM4-205ENST00000496896 SLC4A5Q9BY07 1137 aa11.54□□□□□ -0.56
TRIM4-205ENST00000496896 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
TRIM4-205ENST00000496896 GOLGA8CPA6NN73 597 aa11.51□□□□□ -0.57
TRIM4-205ENST00000496896 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
TRIM4-205ENST00000496896 ZNF454Q8N9F8 522 aa11.5□□□□□ -0.57
TRIM4-205ENST00000496896 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
TRIM4-205ENST00000496896 BHMG1C9JSJ3 638 aaPredicted RBP11.49□□□□□ -0.57
TRIM4-205ENST00000496896 WNT2BQ93097 391 aa11.49□□□□□ -0.57
TRIM4-205ENST00000496896 MRPL50Q8N5N7 158 aaKnown RBP11.47□□□□□ -0.57
TRIM4-205ENST00000496896 PTPREP23469 700 aa11.46□□□□□ -0.57
TRIM4-205ENST00000496896 WDR70Q9NW82 654 aa11.46□□□□□ -0.57
TRIM4-205ENST00000496896 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
TRIM4-205ENST00000496896 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRIM4-205ENST00000496896 ZBED2Q9BTP6 218 aa11.44□□□□□ -0.58
TRIM4-205ENST00000496896 E2F4Q16254 413 aa11.42□□□□□ -0.58
TRIM4-205ENST00000496896 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms