RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 PLCH2O75038 1416 aa18.89■□□□□ 0.61
HLA-DQA1-207ENST00000496318 ARHGAP5Q13017 1502 aa18.89■□□□□ 0.61
HLA-DQA1-207ENST00000496318 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
HLA-DQA1-207ENST00000496318 MADDQ8WXG6 1647 aa18.88■□□□□ 0.61
HLA-DQA1-207ENST00000496318 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
HLA-DQA1-207ENST00000496318 YEATS2Q9ULM3 1422 aa18.87■□□□□ 0.61
HLA-DQA1-207ENST00000496318 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
HLA-DQA1-207ENST00000496318 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
HLA-DQA1-207ENST00000496318 ZFYVE16Q7Z3T8 1539 aa18.85■□□□□ 0.61
HLA-DQA1-207ENST00000496318 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
HLA-DQA1-207ENST00000496318 POGZQ7Z3K3 1410 aa18.84■□□□□ 0.61
HLA-DQA1-207ENST00000496318 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
HLA-DQA1-207ENST00000496318 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.6
HLA-DQA1-207ENST00000496318 HECW2Q9P2P5 1572 aa18.83■□□□□ 0.6
HLA-DQA1-207ENST00000496318 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQA1-207ENST00000496318 ARID4BQ4LE39 1312 aaPredicted RBP18.79■□□□□ 0.6
HLA-DQA1-207ENST00000496318 ABCC1P33527 1531 aa18.79■□□□□ 0.6
HLA-DQA1-207ENST00000496318 ARHGEF12Q9NZN5 1544 aa18.79■□□□□ 0.6
HLA-DQA1-207ENST00000496318 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
HLA-DQA1-207ENST00000496318 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
HLA-DQA1-207ENST00000496318 SAMD9LQ8IVG5 1584 aa18.77■□□□□ 0.6
HLA-DQA1-207ENST00000496318 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
HLA-DQA1-207ENST00000496318 KDM5CP41229 1560 aa18.76■□□□□ 0.59
HLA-DQA1-207ENST00000496318 PTPRMP28827 1452 aa18.75■□□□□ 0.59
HLA-DQA1-207ENST00000496318 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
HLA-DQA1-207ENST00000496318 AFAP1Q8N556 730 aa18.73■□□□□ 0.59
HLA-DQA1-207ENST00000496318 TRAPPC8Q9Y2L5 1435 aa18.73■□□□□ 0.59
HLA-DQA1-207ENST00000496318 SYCP2Q9BX26 1530 aa18.72■□□□□ 0.59
HLA-DQA1-207ENST00000496318 KIDINS220Q9ULH0 1771 aa18.72■□□□□ 0.59
HLA-DQA1-207ENST00000496318 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
HLA-DQA1-207ENST00000496318 MLECQ14165 292 aa18.71■□□□□ 0.59
HLA-DQA1-207ENST00000496318 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
HLA-DQA1-207ENST00000496318 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
HLA-DQA1-207ENST00000496318 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
HLA-DQA1-207ENST00000496318 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQA1-207ENST00000496318 MAGI2Q86UL8 1455 aa18.69■□□□□ 0.58
HLA-DQA1-207ENST00000496318 EHBP1L1Q8N3D4 1523 aa18.69■□□□□ 0.58
HLA-DQA1-207ENST00000496318 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
HLA-DQA1-207ENST00000496318 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
HLA-DQA1-207ENST00000496318 ATP10AO60312 1499 aa18.66■□□□□ 0.58
HLA-DQA1-207ENST00000496318 MYT1LQ9UL68 1186 aa18.65■□□□□ 0.58
HLA-DQA1-207ENST00000496318 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.57
HLA-DQA1-207ENST00000496318 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
HLA-DQA1-207ENST00000496318 INO80Q9ULG1 1556 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQA1-207ENST00000496318 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
HLA-DQA1-207ENST00000496318 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQA1-207ENST00000496318 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-DQA1-207ENST00000496318 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
HLA-DQA1-207ENST00000496318 REREQ9P2R6 1566 aa18.58■□□□□ 0.56
HLA-DQA1-207ENST00000496318 NCOA2Q15596 1464 aa18.58■□□□□ 0.56
HLA-DQA1-207ENST00000496318 ATP7AQ04656 1500 aa18.57■□□□□ 0.56
HLA-DQA1-207ENST00000496318 LMTK3Q96Q04 1460 aa18.57■□□□□ 0.56
HLA-DQA1-207ENST00000496318 C3P01024 1663 aa18.57■□□□□ 0.56
HLA-DQA1-207ENST00000496318 CFDP1Q9UEE9 299 aaPredicted RBP18.56■□□□□ 0.56
HLA-DQA1-207ENST00000496318 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
HLA-DQA1-207ENST00000496318 CEBPAP49715 358 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQA1-207ENST00000496318 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.55
HLA-DQA1-207ENST00000496318 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.55
HLA-DQA1-207ENST00000496318 PREX1Q8TCU6 1659 aa18.51■□□□□ 0.55
HLA-DQA1-207ENST00000496318 HSPA2P54652 639 aa18.5■□□□□ 0.55
HLA-DQA1-207ENST00000496318 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQA1-207ENST00000496318 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
HLA-DQA1-207ENST00000496318 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
HLA-DQA1-207ENST00000496318 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
HLA-DQA1-207ENST00000496318 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
HLA-DQA1-207ENST00000496318 AGLP35573 1532 aa18.49■□□□□ 0.55
HLA-DQA1-207ENST00000496318 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
HLA-DQA1-207ENST00000496318 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
HLA-DQA1-207ENST00000496318 SETD1BQ9UPS6 1966 aaKnown RBP18.44■□□□□ 0.54
HLA-DQA1-207ENST00000496318 A2MP01023 1474 aa18.43■□□□□ 0.54
HLA-DQA1-207ENST00000496318 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
HLA-DQA1-207ENST00000496318 CCDC141Q6ZP82 1450 aa18.41■□□□□ 0.54
HLA-DQA1-207ENST00000496318 STRCQ7RTU9 1775 aa18.41■□□□□ 0.54
HLA-DQA1-207ENST00000496318 MAP3K1Q13233 1512 aa18.4■□□□□ 0.54
HLA-DQA1-207ENST00000496318 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
HLA-DQA1-207ENST00000496318 CROCC2H7BZ55 1655 aa18.37■□□□□ 0.53
HLA-DQA1-207ENST00000496318 MYOM3Q5VTT5 1437 aa18.36■□□□□ 0.53
HLA-DQA1-207ENST00000496318 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQA1-207ENST00000496318 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
HLA-DQA1-207ENST00000496318 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
HLA-DQA1-207ENST00000496318 GGT6Q6P531 493 aa18.33■□□□□ 0.52
HLA-DQA1-207ENST00000496318 MYO3AQ8NEV4 1616 aa18.33■□□□□ 0.52
HLA-DQA1-207ENST00000496318 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
HLA-DQA1-207ENST00000496318 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
HLA-DQA1-207ENST00000496318 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
HLA-DQA1-207ENST00000496318 CEP152O94986 1710 aa18.31■□□□□ 0.52
HLA-DQA1-207ENST00000496318 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
HLA-DQA1-207ENST00000496318 CNTLNQ9NXG0 1405 aa18.3■□□□□ 0.52
HLA-DQA1-207ENST00000496318 ZMYM3Q14202 1370 aa18.29■□□□□ 0.52
HLA-DQA1-207ENST00000496318 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
HLA-DQA1-207ENST00000496318 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
HLA-DQA1-207ENST00000496318 KIF3BO15066 747 aa18.26■□□□□ 0.51
HLA-DQA1-207ENST00000496318 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
HLA-DQA1-207ENST00000496318 MIA2Q96PC5 1412 aa18.25■□□□□ 0.51
HLA-DQA1-207ENST00000496318 MROH1Q8NDA8 1641 aa18.25■□□□□ 0.51
HLA-DQA1-207ENST00000496318 RNF17Q9BXT8 1623 aaKnown RBP18.25■□□□□ 0.51
HLA-DQA1-207ENST00000496318 APLP2Q06481 763 aa18.25■□□□□ 0.51
HLA-DQA1-207ENST00000496318 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
HLA-DQA1-207ENST00000496318 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
HLA-DQA1-207ENST00000496318 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms