RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 POGZQ7Z3K3 1410 aa38.98■■■■□ 3.83
HLA-C-209ENST00000495835 ARHGAP5Q13017 1502 aa38.97■■■■□ 3.83
HLA-C-209ENST00000495835 CEP162Q5TB80 1403 aa38.96■■■■□ 3.83
HLA-C-209ENST00000495835 CDC42BPBQ9Y5S2 1711 aa38.93■■■■□ 3.82
HLA-C-209ENST00000495835 ZFYVE16Q7Z3T8 1539 aa38.92■■■■□ 3.82
HLA-C-209ENST00000495835 ADAMTSL3P82987 1691 aa38.9■■■■□ 3.82
HLA-C-209ENST00000495835 PREX2Q70Z35 1606 aa38.9■■■■□ 3.82
HLA-C-209ENST00000495835 BCORL1Q5H9F3 1711 aa38.88■■■■□ 3.81
HLA-C-209ENST00000495835 ARID4BQ4LE39 1312 aaPredicted RBP38.88■■■■□ 3.81
HLA-C-209ENST00000495835 ZNF518AQ6AHZ1 1483 aa38.87■■■■□ 3.81
HLA-C-209ENST00000495835 YEATS2Q9ULM3 1422 aa38.83■■■■□ 3.81
HLA-C-209ENST00000495835 CDC42BPAQ5VT25 1732 aa38.82■■■■□ 3.8
HLA-C-209ENST00000495835 KDM5CP41229 1560 aa38.79■■■■□ 3.8
HLA-C-209ENST00000495835 ATP10AO60312 1499 aa38.76■■■■□ 3.8
HLA-C-209ENST00000495835 MTUS2Q5JR59 1369 aa38.76■■■■□ 3.8
HLA-C-209ENST00000495835 AFAP1Q8N556 730 aa38.74■■■■□ 3.79
HLA-C-209ENST00000495835 ABCC1P33527 1531 aa38.73■■■■□ 3.79
HLA-C-209ENST00000495835 PTPRMP28827 1452 aa38.73■■■■□ 3.79
HLA-C-209ENST00000495835 LOC105371045A0A1W2PR82 267 aa38.72■■■■□ 3.79
HLA-C-209ENST00000495835 GPATCH8Q9UKJ3 1502 aaKnown RBP38.72■■■■□ 3.79
HLA-C-209ENST00000495835 MADDQ8WXG6 1647 aa38.69■■■■□ 3.78
HLA-C-209ENST00000495835 C9orf84Q5VXU9 1444 aa38.69■■■■□ 3.78
HLA-C-209ENST00000495835 MLH3Q9UHC1 1453 aa38.68■■■■□ 3.78
HLA-C-209ENST00000495835 ITSN2Q9NZM3 1697 aa38.68■■■■□ 3.78
HLA-C-209ENST00000495835 HECW2Q9P2P5 1572 aa38.67■■■■□ 3.78
HLA-C-209ENST00000495835 EHBP1L1Q8N3D4 1523 aa38.66■■■■□ 3.78
HLA-C-209ENST00000495835 ARHGEF12Q9NZN5 1544 aa38.66■■■■□ 3.78
HLA-C-209ENST00000495835 SIGLEC1Q9BZZ2 1709 aa38.65■■■■□ 3.78
HLA-C-209ENST00000495835 CCNB3Q8WWL7 1395 aa38.65■■■■□ 3.78
HLA-C-209ENST00000495835 TRAPPC8Q9Y2L5 1435 aa38.63■■■■□ 3.77
HLA-C-209ENST00000495835 CFDP1Q9UEE9 299 aaPredicted RBP38.6■■■■□ 3.77
HLA-C-209ENST00000495835 SAMD9LQ8IVG5 1584 aa38.59■■■■□ 3.77
HLA-C-209ENST00000495835 REREQ9P2R6 1566 aa38.59■■■■□ 3.77
HLA-C-209ENST00000495835 PLEKHH2Q8IVE3 1493 aa38.59■■■■□ 3.77
HLA-C-209ENST00000495835 KIAA1107Q9UPP5 1409 aa38.58■■■■□ 3.77
HLA-C-209ENST00000495835 MYT1LQ9UL68 1186 aa38.58■■■■□ 3.77
HLA-C-209ENST00000495835 VPS8Q8N3P4 1428 aa38.57■■■■□ 3.77
HLA-C-209ENST00000495835 ZNF777Q9ULD5 760 aaPredicted RBP38.57■■■■□ 3.76
HLA-C-209ENST00000495835 RIMS1Q86UR5 1692 aaKnown RBP38.56■■■■□ 3.76
HLA-C-209ENST00000495835 DIP2CQ9Y2E4 1556 aa38.56■■■■□ 3.76
HLA-C-209ENST00000495835 ABCA6Q8N139 1617 aa38.5■■■■□ 3.75
HLA-C-209ENST00000495835 TIAM1Q13009 1591 aa38.5■■■■□ 3.75
HLA-C-209ENST00000495835 SYCP2Q9BX26 1530 aa38.49■■■■□ 3.75
HLA-C-209ENST00000495835 FER1L4A9Z1Z3 1794 aa38.49■■■■□ 3.75
HLA-C-209ENST00000495835 KIDINS220Q9ULH0 1771 aa38.49■■■■□ 3.75
HLA-C-209ENST00000495835 MLECQ14165 292 aa38.48■■■■□ 3.75
HLA-C-209ENST00000495835 HNRNPMP52272 730 aaKnown RBP eCLIP38.46■■■■□ 3.75
HLA-C-209ENST00000495835 SUPT6HQ7KZ85 1726 aaKnown RBP38.46■■■■□ 3.75
HLA-C-209ENST00000495835 AGLP35573 1532 aa38.45■■■■□ 3.75
HLA-C-209ENST00000495835 MAP3K1Q13233 1512 aa38.42■■■■□ 3.74
HLA-C-209ENST00000495835 SPAG9O60271 1321 aaKnown RBP38.41■■■■□ 3.74
HLA-C-209ENST00000495835 NCOA2Q15596 1464 aa38.39■■■■□ 3.74
HLA-C-209ENST00000495835 LRRC9Q6ZRR7 1453 aa38.35■■■■□ 3.73
HLA-C-209ENST00000495835 ATP7AQ04656 1500 aa38.33■■■■□ 3.73
HLA-C-209ENST00000495835 INO80Q9ULG1 1556 aaPredicted RBP38.31■■■■□ 3.72
HLA-C-209ENST00000495835 MBD5Q9P267 1494 aa38.3■■■■□ 3.72
HLA-C-209ENST00000495835 ZNF644Q9H582 1327 aaPredicted RBP38.3■■■■□ 3.72
HLA-C-209ENST00000495835 LMTK3Q96Q04 1460 aa38.29■■■■□ 3.72
HLA-C-209ENST00000495835 RSPH4AQ5TD94 716 aa38.28■■■■□ 3.72
HLA-C-209ENST00000495835 RTEL1-TNFRSF6BF6WH68 1400 aa38.24■■■■□ 3.71
HLA-C-209ENST00000495835 ESF1Q9H501 851 aaKnown RBP38.22■■■■□ 3.71
HLA-C-209ENST00000495835 PLPPR3Q6T4P5 718 aa38.2■■■■□ 3.71
HLA-C-209ENST00000495835 A2MP01023 1474 aa38.19■■■■□ 3.7
HLA-C-209ENST00000495835 CAMSAP2Q08AD1 1489 aa38.19■■■■□ 3.7
HLA-C-209ENST00000495835 CNTLNQ9NXG0 1405 aa38.19■■■■□ 3.7
HLA-C-209ENST00000495835 PLXNC1O60486 1568 aa38.19■■■■□ 3.7
HLA-C-209ENST00000495835 ADGBQ8N7X0 1667 aa38.18■■■■□ 3.7
HLA-C-209ENST00000495835 SETD1BQ9UPS6 1966 aaKnown RBP38.17■■■■□ 3.7
HLA-C-209ENST00000495835 KANK4Q5T7N3 995 aaPredicted RBP38.16■■■■□ 3.7
HLA-C-209ENST00000495835 CCDC141Q6ZP82 1450 aa38.15■■■■□ 3.7
HLA-C-209ENST00000495835 APLP2Q06481 763 aa38.14■■■■□ 3.7
HLA-C-209ENST00000495835 CEBPAP49715 358 aaPredicted RBP38.13■■■■□ 3.69
HLA-C-209ENST00000495835 PREX1Q8TCU6 1659 aa38.12■■■■□ 3.69
HLA-C-209ENST00000495835 ARHGEF5Q12774 1597 aa38.11■■■■□ 3.69
HLA-C-209ENST00000495835 C3P01024 1663 aa38.09■■■■□ 3.69
HLA-C-209ENST00000495835 MIA2Q96PC5 1412 aa38.09■■■■□ 3.69
HLA-C-209ENST00000495835 PPP6R1Q9UPN7 881 aa38.08■■■■□ 3.69
HLA-C-209ENST00000495835 MROH2AA6NES4 1674 aa38.07■■■■□ 3.68
HLA-C-209ENST00000495835 MYOM3Q5VTT5 1437 aa38.05■■■■□ 3.68
HLA-C-209ENST00000495835 DHX29Q7Z478 1369 aaKnown RBP38.05■■■■□ 3.68
HLA-C-209ENST00000495835 TSPY4P0CV99 314 aa38.03■■■■□ 3.68
HLA-C-209ENST00000495835 TSPY10P0CW01 314 aa38.03■■■■□ 3.68
HLA-C-209ENST00000495835 HSPA2P54652 639 aa38.01■■■■□ 3.68
HLA-C-209ENST00000495835 UHRF1BP1Q6BDS2 1440 aa37.99■■■■□ 3.67
HLA-C-209ENST00000495835 ZMYM3Q14202 1370 aa37.96■■■■□ 3.67
HLA-C-209ENST00000495835 GGT6Q6P531 493 aa37.96■■■■□ 3.67
HLA-C-209ENST00000495835 NPATQ14207 1427 aa37.95■■■■□ 3.67
HLA-C-209ENST00000495835 MAST1Q9Y2H9 1570 aa37.93■■■■□ 3.66
HLA-C-209ENST00000495835 CLTCQ00610 1675 aaKnown RBP37.91■■■■□ 3.66
HLA-C-209ENST00000495835 FAM135AQ9P2D6 1515 aa37.86■■■■□ 3.65
HLA-C-209ENST00000495835 KIF3BO15066 747 aa37.84■■■■□ 3.65
HLA-C-209ENST00000495835 DMRT2Q9Y5R5 561 aa37.79■■■■□ 3.64
HLA-C-209ENST00000495835 PTPN23Q9H3S7 1636 aa37.79■■■■□ 3.64
HLA-C-209ENST00000495835 ILDR1Q86SU0 546 aaPredicted RBP37.77■■■■□ 3.64
HLA-C-209ENST00000495835 PTPRKQ15262 1439 aa37.76■■■■□ 3.63
HLA-C-209ENST00000495835 FGD6Q6ZV73 1430 aa37.75■■■■□ 3.63
HLA-C-209ENST00000495835 STRCQ7RTU9 1775 aa37.73■■■■□ 3.63
HLA-C-209ENST00000495835 TCOF1Q13428 1488 aaKnown RBP37.73■■■■□ 3.63
HLA-C-209ENST00000495835 KDM5DQ9BY66 1539 aa37.72■■■■□ 3.63
HLA-C-209ENST00000495835 SHANK2Q9UPX8 1470 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms