RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 ARHGAP5Q13017 1502 aa36.41■■■■□ 3.42
PPP1R3F-205ENST00000495799 DAPK1P53355 1430 aa36.41■■■■□ 3.42
PPP1R3F-205ENST00000495799 SETD5Q9C0A6 1442 aa36.4■■■■□ 3.42
PPP1R3F-205ENST00000495799 ABCA9Q8IUA7 1624 aa36.39■■■■□ 3.42
PPP1R3F-205ENST00000495799 ZNF777Q9ULD5 760 aaPredicted RBP36.39■■■■□ 3.42
PPP1R3F-205ENST00000495799 ARAP3Q8WWN8 1544 aa36.39■■■■□ 3.42
PPP1R3F-205ENST00000495799 PTPRKQ15262 1439 aa36.39■■■■□ 3.42
PPP1R3F-205ENST00000495799 ZNF644Q9H582 1327 aaPredicted RBP36.38■■■■□ 3.41
PPP1R3F-205ENST00000495799 HRCP23327 699 aa36.38■■■■□ 3.41
PPP1R3F-205ENST00000495799 PLCH2O75038 1416 aa36.37■■■■□ 3.41
PPP1R3F-205ENST00000495799 MAPKBP1O60336 1514 aa36.36■■■■□ 3.41
PPP1R3F-205ENST00000495799 CCER1Q8TC90 406 aaPredicted RBP36.36■■■■□ 3.41
PPP1R3F-205ENST00000495799 AKNAQ7Z591 1439 aa36.36■■■■□ 3.41
PPP1R3F-205ENST00000495799 PLEKHH2Q8IVE3 1493 aa36.34■■■■□ 3.41
PPP1R3F-205ENST00000495799 HFM1A2PYH4 1435 aa36.33■■■■□ 3.41
PPP1R3F-205ENST00000495799 ABCC5O15440 1437 aa36.33■■■■□ 3.41
PPP1R3F-205ENST00000495799 SAMD9LQ8IVG5 1584 aa36.33■■■■□ 3.41
PPP1R3F-205ENST00000495799 CROCC2H7BZ55 1655 aa36.33■■■■□ 3.41
PPP1R3F-205ENST00000495799 ARHGEF5Q12774 1597 aa36.31■■■■□ 3.4
PPP1R3F-205ENST00000495799 ZEB1P37275 1124 aaPredicted RBP36.3■■■■□ 3.4
PPP1R3F-205ENST00000495799 RAB3GAP2Q9H2M9 1393 aa36.3■■■■□ 3.4
PPP1R3F-205ENST00000495799 ROCK1Q13464 1354 aa36.28■■■■□ 3.4
PPP1R3F-205ENST00000495799 GCC2Q8IWJ2 1684 aa36.27■■■■□ 3.4
PPP1R3F-205ENST00000495799 EFCAB2Q5VUJ9 269 aa36.27■■■■□ 3.4
PPP1R3F-205ENST00000495799 ADGBQ8N7X0 1667 aa36.26■■■■□ 3.4
PPP1R3F-205ENST00000495799 RSPH4AQ5TD94 716 aa36.25■■■■□ 3.39
PPP1R3F-205ENST00000495799 SHANK2Q9UPX8 1470 aa36.25■■■■□ 3.39
PPP1R3F-205ENST00000495799 KIAA1107Q9UPP5 1409 aa36.24■■■■□ 3.39
PPP1R3F-205ENST00000495799 NAIPQ13075 1403 aa36.22■■■■□ 3.39
PPP1R3F-205ENST00000495799 CHIC2Q9UKJ5 165 aa36.2■■■■□ 3.39
PPP1R3F-205ENST00000495799 CCDC141Q6ZP82 1450 aa36.19■■■■□ 3.38
PPP1R3F-205ENST00000495799 MBD5Q9P267 1494 aa36.19■■■■□ 3.38
PPP1R3F-205ENST00000495799 ADGRL2O95490 1459 aa36.18■■■■□ 3.38
PPP1R3F-205ENST00000495799 SYCP2Q9BX26 1530 aa36.17■■■■□ 3.38
PPP1R3F-205ENST00000495799 ABCC1P33527 1531 aa36.15■■■■□ 3.38
PPP1R3F-205ENST00000495799 TSPY4P0CV99 314 aa36.13■■■■□ 3.38
PPP1R3F-205ENST00000495799 TSPY10P0CW01 314 aa36.13■■■■□ 3.38
PPP1R3F-205ENST00000495799 CFAP74Q9C0B2 1584 aa36.13■■■■□ 3.37
PPP1R3F-205ENST00000495799 HNRNPMP52272 730 aaKnown RBP eCLIP36.13■■■■□ 3.37
PPP1R3F-205ENST00000495799 ACIN1Q9UKV3 1341 aaKnown RBP36.12■■■■□ 3.37
PPP1R3F-205ENST00000495799 FANCAO15360 1455 aa36.12■■■■□ 3.37
PPP1R3F-205ENST00000495799 C9orf84Q5VXU9 1444 aa36.12■■■■□ 3.37
PPP1R3F-205ENST00000495799 ANKRD30AQ9BXX3 1397 aa36.11■■■■□ 3.37
PPP1R3F-205ENST00000495799 RRP7BPQ9NSQ0 103 aa36.11■■■■□ 3.37
PPP1R3F-205ENST00000495799 DHX57Q6P158 1386 aaKnown RBP36.1■■■■□ 3.37
PPP1R3F-205ENST00000495799 GLI2P10070 1586 aa36.09■■■■□ 3.37
PPP1R3F-205ENST00000495799 CD109Q6YHK3 1445 aa36.09■■■■□ 3.37
PPP1R3F-205ENST00000495799 MAST1Q9Y2H9 1570 aa36.08■■■■□ 3.37
PPP1R3F-205ENST00000495799 CLSPNQ9HAW4 1339 aa36.07■■■■□ 3.36
PPP1R3F-205ENST00000495799 NCOA1Q15788 1441 aa36.06■■■■□ 3.36
PPP1R3F-205ENST00000495799 ARHGEF12Q9NZN5 1544 aa36.01■■■■□ 3.36
PPP1R3F-205ENST00000495799 MAP3K4Q9Y6R4 1608 aa36■■■■□ 3.35
PPP1R3F-205ENST00000495799 DIP2BQ9P265 1576 aa35.98■■■■□ 3.35
PPP1R3F-205ENST00000495799 ADGRL1O94910 1474 aa35.98■■■■□ 3.35
PPP1R3F-205ENST00000495799 PLXNC1O60486 1568 aa35.93■■■■□ 3.34
PPP1R3F-205ENST00000495799 NEO1Q92859 1461 aa35.93■■■■□ 3.34
PPP1R3F-205ENST00000495799 KDM6BO15054 1643 aa35.92■■■■□ 3.34
PPP1R3F-205ENST00000495799 TRAPPC8Q9Y2L5 1435 aa35.9■■■■□ 3.34
PPP1R3F-205ENST00000495799 KIF15Q9NS87 1388 aa35.89■■■■□ 3.34
PPP1R3F-205ENST00000495799 SCAPERQ9BY12 1400 aa35.88■■■■□ 3.34
PPP1R3F-205ENST00000495799 RTEL1-TNFRSF6BF6WH68 1400 aa35.87■■■■□ 3.33
PPP1R3F-205ENST00000495799 ANKRD50Q9ULJ7 1429 aa35.87■■■■□ 3.33
PPP1R3F-205ENST00000495799 FAM69CQ0P6D2 419 aa35.84■■■■□ 3.33
PPP1R3F-205ENST00000495799 SPAG9O60271 1321 aaKnown RBP35.81■■■■□ 3.32
PPP1R3F-205ENST00000495799 ZNF518AQ6AHZ1 1483 aa35.8■■■■□ 3.32
PPP1R3F-205ENST00000495799 TRIM52Q96A61 297 aa35.8■■■■□ 3.32
PPP1R3F-205ENST00000495799 ZFYVE16Q7Z3T8 1539 aa35.79■■■■□ 3.32
PPP1R3F-205ENST00000495799 DUOX2Q9NRD8 1548 aa35.78■■■■□ 3.32
PPP1R3F-205ENST00000495799 INO80Q9ULG1 1556 aaPredicted RBP35.77■■■■□ 3.32
PPP1R3F-205ENST00000495799 TEX14Q8IWB6 1497 aa35.74■■■■□ 3.31
PPP1R3F-205ENST00000495799 AFAP1Q8N556 730 aa35.74■■■■□ 3.31
PPP1R3F-205ENST00000495799 ATP7AQ04656 1500 aa35.74■■■■□ 3.31
PPP1R3F-205ENST00000495799 POGZQ7Z3K3 1410 aa35.73■■■■□ 3.31
PPP1R3F-205ENST00000495799 KIF13AQ9H1H9 1805 aa35.73■■■■□ 3.31
PPP1R3F-205ENST00000495799 KDM5CP41229 1560 aa35.7■■■■□ 3.31
PPP1R3F-205ENST00000495799 ERBINQ96RT1 1412 aa35.7■■■■□ 3.31
PPP1R3F-205ENST00000495799 DENND4BO75064 1496 aaPredicted RBP35.69■■■■□ 3.3
PPP1R3F-205ENST00000495799 PPRC1Q5VV67 1664 aaKnown RBP35.66■■■■□ 3.3
PPP1R3F-205ENST00000495799 TSPOAP1O95153 1857 aa35.65■■■■□ 3.3
PPP1R3F-205ENST00000495799 KDM5DQ9BY66 1539 aa35.64■■■■□ 3.3
PPP1R3F-205ENST00000495799 DNAJC5Q9H3Z4 198 aa35.64■■■■□ 3.3
PPP1R3F-205ENST00000495799 MPHOSPH9Q99550 1183 aa35.63■■■■□ 3.29
PPP1R3F-205ENST00000495799 HECW2Q9P2P5 1572 aa35.62■■■■□ 3.29
PPP1R3F-205ENST00000495799 MLH3Q9UHC1 1453 aa35.61■■■■□ 3.29
PPP1R3F-205ENST00000495799 MYT1LQ9UL68 1186 aa35.61■■■■□ 3.29
PPP1R3F-205ENST00000495799 KIDINS220Q9ULH0 1771 aa35.61■■■■□ 3.29
PPP1R3F-205ENST00000495799 UNC13BO14795 1591 aa35.6■■■■□ 3.29
PPP1R3F-205ENST00000495799 RICTORQ6R327 1708 aa35.59■■■■□ 3.29
PPP1R3F-205ENST00000495799 PZPP20742 1482 aa35.57■■■■□ 3.28
PPP1R3F-205ENST00000495799 SLC4A1APQ9BWU0 796 aaKnown RBP35.56■■■■□ 3.28
PPP1R3F-205ENST00000495799 NUP155O75694 1391 aa35.54■■■■□ 3.28
PPP1R3F-205ENST00000495799 EIF2AK4Q9P2K8 1649 aaKnown RBP35.53■■■■□ 3.28
PPP1R3F-205ENST00000495799 MAGI2Q86UL8 1455 aa35.48■■■■□ 3.27
PPP1R3F-205ENST00000495799 DHX29Q7Z478 1369 aaKnown RBP35.48■■■■□ 3.27
PPP1R3F-205ENST00000495799 ZMYM4Q5VZL5 1548 aa35.46■■■■□ 3.27
PPP1R3F-205ENST00000495799 FRMPD1Q5SYB0 1578 aa35.45■■■■□ 3.27
PPP1R3F-205ENST00000495799 IQGAP3Q86VI3 1631 aa35.45■■■■□ 3.27
PPP1R3F-205ENST00000495799 RAPGEF3O95398 923 aa35.45■■■■□ 3.27
PPP1R3F-205ENST00000495799 TIMELESSQ9UNS1 1208 aa35.45■■■■□ 3.27
PPP1R3F-205ENST00000495799 A2MP01023 1474 aa35.43■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms