RNA–Protein interactions for RNA: ENST00000495188.2

RNF146-208, Transcript of ring finger protein 146, human

TSL 2

Gene RNF146, Length 593 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF146-208	ENST00000495188	LHX8	Q68G74	356 aa		14.67	□□□□□ -0.06
RNF146-208	ENST00000495188	PDE4A	P27815	886 aa		14.64	□□□□□ -0.07
RNF146-208	ENST00000495188	VSIG10	Q8N0Z9	540 aa		14.63	□□□□□ -0.07
RNF146-208	ENST00000495188	TMC2	Q8TDI7	906 aa		14.63	□□□□□ -0.07
RNF146-208	ENST00000495188	CRISPLD2	Q9H0B8	497 aa		14.63	□□□□□ -0.07
RNF146-208	ENST00000495188	NCKAP5L	Q9HCH0	1330 aa		14.62	□□□□□ -0.07
RNF146-208	ENST00000495188	TMEM92	Q6UXU6	159 aa		14.6	□□□□□ -0.07
RNF146-208	ENST00000495188	GPHN	Q9NQX3	736 aa	Predicted RBP	14.6	□□□□□ -0.07
RNF146-208	ENST00000495188	C2orf72	A6NCS6	295 aa		14.58	□□□□□ -0.08
RNF146-208	ENST00000495188	LARP6	Q9BRS8	491 aa	Known RBP	14.58	□□□□□ -0.08
RNF146-208	ENST00000495188	KIF3C	O14782	793 aa		14.57	□□□□□ -0.08
RNF146-208	ENST00000495188	WDR70	Q9NW82	654 aa		14.56	□□□□□ -0.08
RNF146-208	ENST00000495188	SLAIN1	Q8ND83	568 aa		14.55	□□□□□ -0.08
RNF146-208	ENST00000495188	DDX27	Q96GQ7	796 aa	Known RBP	14.55	□□□□□ -0.08
RNF146-208	ENST00000495188	KDM2A	Q9Y2K7	1162 aa		14.55	□□□□□ -0.08
RNF146-208	ENST00000495188	MFSD10	Q14728	455 aa		14.54	□□□□□ -0.08
RNF146-208	ENST00000495188	OTUD5	Q96G74	571 aa		14.53	□□□□□ -0.08
RNF146-208	ENST00000495188	FOXK1	P85037	733 aa		14.51	□□□□□ -0.09
RNF146-208	ENST00000495188	PPP1R15B	Q5SWA1	713 aa		14.51	□□□□□ -0.09
RNF146-208	ENST00000495188	DSG2	Q14126	1118 aa		14.5	□□□□□ -0.09
RNF146-208	ENST00000495188	PLPP6	Q8IY26	295 aa		14.46	□□□□□ -0.09
RNF146-208	ENST00000495188	E2F4	Q16254	413 aa		14.4	□□□□□ -0.1
RNF146-208	ENST00000495188	CAMK2B	Q13554	666 aa		14.37	□□□□□ -0.11
RNF146-208	ENST00000495188	P3H3	Q8IVL6	736 aa		14.37	□□□□□ -0.11
RNF146-208	ENST00000495188	SNPH	O15079	494 aa		14.35	□□□□□ -0.11
RNF146-208	ENST00000495188	DOK7	Q18PE1	504 aa		14.34	□□□□□ -0.11
RNF146-208	ENST00000495188	SLC34A2	O95436	690 aa		14.31	□□□□□ -0.12
RNF146-208	ENST00000495188	KCNV2	Q8TDN2	545 aa		14.31	□□□□□ -0.12
RNF146-208	ENST00000495188	HOXB3	P14651	431 aa	Predicted RBP	14.29	□□□□□ -0.12
RNF146-208	ENST00000495188	EMILIN3	Q9NT22	766 aa		14.29	□□□□□ -0.12
RNF146-208	ENST00000495188	RIMBP2	O15034	1052 aa		14.28	□□□□□ -0.12
RNF146-208	ENST00000495188	PTCD2	Q8WV60	388 aa	Known RBP	14.27	□□□□□ -0.13
RNF146-208	ENST00000495188	UPF1	Q92900	1129 aa	Known RBP eCLIP	14.27	□□□□□ -0.13
RNF146-208	ENST00000495188	ZNF710	Q8N1W2	664 aa		14.26	□□□□□ -0.13
RNF146-208	ENST00000495188	OXER1	Q8TDS5	423 aa		14.25	□□□□□ -0.13
RNF146-208	ENST00000495188	ARHGEF1	Q92888	912 aa	Known RBP	14.25	□□□□□ -0.13
RNF146-208	ENST00000495188	TBC1D12	O60347	775 aa		14.24	□□□□□ -0.13
RNF146-208	ENST00000495188	ARIH1	Q9Y4X5	557 aa	Predicted RBP	14.24	□□□□□ -0.13
RNF146-208	ENST00000495188	ZSWIM6	Q9HCJ5	1215 aa		14.23	□□□□□ -0.13
RNF146-208	ENST00000495188	MAP3K9	P80192	1104 aa		14.22	□□□□□ -0.13
RNF146-208	ENST00000495188	PCDHGA4	Q9Y5G9	962 aa		14.22	□□□□□ -0.13
RNF146-208	ENST00000495188	DPYSL4	O14531	572 aa		14.21	□□□□□ -0.13
RNF146-208	ENST00000495188	ZNF316	A6NFI3	1004 aa	Predicted RBP	14.15	□□□□□ -0.14
RNF146-208	ENST00000495188	ARSI	Q5FYB1	569 aa		14.15	□□□□□ -0.14
RNF146-208	ENST00000495188	GPR153	Q6NV75	609 aa		14.15	□□□□□ -0.14
RNF146-208	ENST00000495188	SPDYE16	A6NNV3	312 aa	Predicted RBP	14.14	□□□□□ -0.15
RNF146-208	ENST00000495188	PDIA6	Q15084	440 aa		14.13	□□□□□ -0.15
RNF146-208	ENST00000495188	EVI5	O60447	810 aa		14.12	□□□□□ -0.15
RNF146-208	ENST00000495188	HOXB1	P14653	301 aa	Predicted RBP	14.12	□□□□□ -0.15
RNF146-208	ENST00000495188	KHSRP	Q92945	711 aa	Known RBP eCLIP	14.11	□□□□□ -0.15	2e-11	■■■■■ 38.1
RNF146-208	ENST00000495188	FAM163A	Q96GL9	167 aa	Predicted RBP	14.11	□□□□□ -0.15
RNF146-208	ENST00000495188	ST18	O60284	1047 aa		14.1	□□□□□ -0.15
RNF146-208	ENST00000495188	NUDT7	P0C024	238 aa		14.1	□□□□□ -0.15
RNF146-208	ENST00000495188	NBR1	Q14596	966 aa		14.1	□□□□□ -0.15
RNF146-208	ENST00000495188	KDM4F	A0A1W2PPD8	638 aa		14.05	□□□□□ -0.16
RNF146-208	ENST00000495188	ANO8	Q9HCE9	1232 aa	Predicted RBP	14.05	□□□□□ -0.16
RNF146-208	ENST00000495188	BCAN	Q96GW7	911 aa		14.04	□□□□□ -0.16
RNF146-208	ENST00000495188	SEMA3E	O15041	775 aa		14.01	□□□□□ -0.17
RNF146-208	ENST00000495188	PTGER2	P43116	358 aa		14	□□□□□ -0.17
RNF146-208	ENST00000495188	EMP3	P54852	163 aa		13.99	□□□□□ -0.17
RNF146-208	ENST00000495188	LCE2D	Q5TA82	110 aa	Predicted RBP	13.99	□□□□□ -0.17
RNF146-208	ENST00000495188	LHX6	Q9UPM6	363 aa		13.99	□□□□□ -0.17
RNF146-208	ENST00000495188	MARVELD3	Q96A59	401 aa		13.97	□□□□□ -0.17
RNF146-208	ENST00000495188	TESPA1	A2RU30	521 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF146-208	ENST00000495188	DDX12P	Q92771	950 aa		13.96	□□□□□ -0.17
RNF146-208	ENST00000495188	PSD	A5PKW4	1024 aa	Predicted RBP	13.95	□□□□□ -0.18
RNF146-208	ENST00000495188	GRXCR2	A6NFK2	248 aa		13.94	□□□□□ -0.18
RNF146-208	ENST00000495188	MLLT3	P42568	568 aa	Predicted RBP	13.94	□□□□□ -0.18
RNF146-208	ENST00000495188	SMYD5	Q6GMV2	418 aa		13.94	□□□□□ -0.18
RNF146-208	ENST00000495188	JPH4	Q96JJ6	628 aa		13.94	□□□□□ -0.18
RNF146-208	ENST00000495188	ERBB3	P21860	1342 aa		13.93	□□□□□ -0.18
RNF146-208	ENST00000495188	PHF14	O94880	888 aa		13.93	□□□□□ -0.18
RNF146-208	ENST00000495188	ZNF454	Q8N9F8	522 aa		13.92	□□□□□ -0.18
RNF146-208	ENST00000495188	TULP1	O00294	542 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF146-208	ENST00000495188	FOSB	P53539	338 aa		13.91	□□□□□ -0.18
RNF146-208	ENST00000495188	EPAS1	Q99814	870 aa		13.9	□□□□□ -0.18
RNF146-208	ENST00000495188	PPP4R3B	Q5MIZ7	849 aa		13.89	□□□□□ -0.19
RNF146-208	ENST00000495188	PCDHGA10	Q9Y5H3	936 aa		13.89	□□□□□ -0.19
RNF146-208	ENST00000495188	FAM205C	A6NFA0	338 aa		13.88	□□□□□ -0.19
RNF146-208	ENST00000495188	VARS2	Q5ST30	1063 aa	Known RBP	13.88	□□□□□ -0.19
RNF146-208	ENST00000495188	TYW1B	Q6NUM6	668 aa		13.88	□□□□□ -0.19
RNF146-208	ENST00000495188	FBXW7	Q969H0	707 aa		13.86	□□□□□ -0.19
RNF146-208	ENST00000495188	ZDHHC16	Q969W1	377 aa		13.86	□□□□□ -0.19
RNF146-208	ENST00000495188	OSBP	P22059	807 aa		13.84	□□□□□ -0.19
RNF146-208	ENST00000495188	HS3ST6	Q96QI5	342 aa		13.84	□□□□□ -0.19
RNF146-208	ENST00000495188	EN1	Q05925	392 aa	Predicted RBP	13.82	□□□□□ -0.2
RNF146-208	ENST00000495188	RBM33	Q96EV2	1170 aa	Known RBP	13.8	□□□□□ -0.2
RNF146-208	ENST00000495188	ADAM33	Q9BZ11	813 aa		13.79	□□□□□ -0.2
RNF146-208	ENST00000495188	MAP3K7	O43318	606 aa		13.78	□□□□□ -0.2
RNF146-208	ENST00000495188	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
RNF146-208	ENST00000495188	BCL2L12	Q9HB09	334 aa		13.78	□□□□□ -0.2
RNF146-208	ENST00000495188	POTEB3	A0JP26	581 aa		13.77	□□□□□ -0.21
RNF146-208	ENST00000495188	PRIM1	P49642	420 aa	Known RBP	13.77	□□□□□ -0.21
RNF146-208	ENST00000495188	POTEB	Q6S5H4	581 aa		13.77	□□□□□ -0.21
RNF146-208	ENST00000495188	ZNF687	Q8N1G0	1237 aa		13.77	□□□□□ -0.21
RNF146-208	ENST00000495188	RBM26	Q5T8P6	1007 aa	Known RBP	13.76	□□□□□ -0.21
RNF146-208	ENST00000495188	LMOD2	Q6P5Q4	547 aa		13.76	□□□□□ -0.21
RNF146-208	ENST00000495188	POTEG	Q6S5H5	508 aa		13.76	□□□□□ -0.21
RNF146-208	ENST00000495188	POTEM	A6NI47	508 aa		13.75	□□□□□ -0.21
RNF146-208	ENST00000495188	PTPRE	P23469	700 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms