RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 CFDP1Q9UEE9 299 aaPredicted RBP20.7■□□□□ 0.9
APTX-231ENST00000494973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.7■□□□□ 0.9
APTX-231ENST00000494973 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
APTX-231ENST00000494973 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
APTX-231ENST00000494973 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
APTX-231ENST00000494973 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
APTX-231ENST00000494973 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
APTX-231ENST00000494973 TCOF1Q13428 1488 aaKnown RBP20.68■□□□□ 0.9
APTX-231ENST00000494973 TEX14Q8IWB6 1497 aa20.68■□□□□ 0.9
APTX-231ENST00000494973 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
APTX-231ENST00000494973 FANCAO15360 1455 aa20.65■□□□□ 0.9
APTX-231ENST00000494973 NEO1Q92859 1461 aa20.64■□□□□ 0.89
APTX-231ENST00000494973 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
APTX-231ENST00000494973 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
APTX-231ENST00000494973 KIAA1107Q9UPP5 1409 aa20.61■□□□□ 0.89
APTX-231ENST00000494973 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
APTX-231ENST00000494973 ABCC1P33527 1531 aa20.58■□□□□ 0.89
APTX-231ENST00000494973 RSPH4AQ5TD94 716 aa20.58■□□□□ 0.89
APTX-231ENST00000494973 ARHGEF5Q12774 1597 aa20.57■□□□□ 0.88
APTX-231ENST00000494973 FAM50AQ14320 339 aaKnown RBP20.57■□□□□ 0.88
APTX-231ENST00000494973 ZNF777Q9ULD5 760 aaPredicted RBP20.57■□□□□ 0.88
APTX-231ENST00000494973 ADGRL1O94910 1474 aa20.56■□□□□ 0.88
APTX-231ENST00000494973 AKNAQ7Z591 1439 aa20.55■□□□□ 0.88
APTX-231ENST00000494973 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
APTX-231ENST00000494973 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
APTX-231ENST00000494973 DNMT1P26358 1616 aaKnown RBP20.54■□□□□ 0.88
APTX-231ENST00000494973 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
APTX-231ENST00000494973 SYCP2Q9BX26 1530 aa20.53■□□□□ 0.88
APTX-231ENST00000494973 CCDC141Q6ZP82 1450 aa20.52■□□□□ 0.88
APTX-231ENST00000494973 SHANK2Q9UPX8 1470 aa20.51■□□□□ 0.87
APTX-231ENST00000494973 CROCC2H7BZ55 1655 aa20.49■□□□□ 0.87
APTX-231ENST00000494973 DAPK1P53355 1430 aa20.49■□□□□ 0.87
APTX-231ENST00000494973 ZNF644Q9H582 1327 aaPredicted RBP20.49■□□□□ 0.87
APTX-231ENST00000494973 MBD5Q9P267 1494 aa20.49■□□□□ 0.87
APTX-231ENST00000494973 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
APTX-231ENST00000494973 ZNF518AQ6AHZ1 1483 aa20.48■□□□□ 0.87
APTX-231ENST00000494973 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
APTX-231ENST00000494973 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
APTX-231ENST00000494973 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
APTX-231ENST00000494973 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
APTX-231ENST00000494973 MAST1Q9Y2H9 1570 aa20.45■□□□□ 0.86
APTX-231ENST00000494973 ABCC5O15440 1437 aa20.44■□□□□ 0.86
APTX-231ENST00000494973 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
APTX-231ENST00000494973 ADGBQ8N7X0 1667 aa20.43■□□□□ 0.86
APTX-231ENST00000494973 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
APTX-231ENST00000494973 KDM5CP41229 1560 aa20.42■□□□□ 0.86
APTX-231ENST00000494973 ROCK1Q13464 1354 aa20.41■□□□□ 0.86
APTX-231ENST00000494973 C9orf84Q5VXU9 1444 aa20.41■□□□□ 0.86
APTX-231ENST00000494973 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
APTX-231ENST00000494973 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
APTX-231ENST00000494973 RICTORQ6R327 1708 aa20.39■□□□□ 0.86
APTX-231ENST00000494973 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.85
APTX-231ENST00000494973 ZMYM4Q5VZL5 1548 aa20.38■□□□□ 0.85
APTX-231ENST00000494973 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
APTX-231ENST00000494973 ITGAEP38570 1179 aa20.38■□□□□ 0.85
APTX-231ENST00000494973 PLXNC1O60486 1568 aa20.38■□□□□ 0.85
APTX-231ENST00000494973 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
APTX-231ENST00000494973 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
APTX-231ENST00000494973 INO80Q9ULG1 1556 aaPredicted RBP20.37■□□□□ 0.85
APTX-231ENST00000494973 MLH3Q9UHC1 1453 aa20.37■□□□□ 0.85
APTX-231ENST00000494973 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
APTX-231ENST00000494973 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
APTX-231ENST00000494973 ATP7AQ04656 1500 aa20.35■□□□□ 0.85
APTX-231ENST00000494973 KDM6BO15054 1643 aa20.35■□□□□ 0.85
APTX-231ENST00000494973 PCGF6Q9BYE7 350 aa20.34■□□□□ 0.85
APTX-231ENST00000494973 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
APTX-231ENST00000494973 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
APTX-231ENST00000494973 HFM1A2PYH4 1435 aa20.33■□□□□ 0.84
APTX-231ENST00000494973 PTPRKQ15262 1439 aa20.33■□□□□ 0.84
APTX-231ENST00000494973 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
APTX-231ENST00000494973 GCC2Q8IWJ2 1684 aa20.32■□□□□ 0.84
APTX-231ENST00000494973 NCOA1Q15788 1441 aa20.31■□□□□ 0.84
APTX-231ENST00000494973 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
APTX-231ENST00000494973 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
APTX-231ENST00000494973 KIF15Q9NS87 1388 aa20.28■□□□□ 0.84
APTX-231ENST00000494973 KIDINS220Q9ULH0 1771 aa20.28■□□□□ 0.84
APTX-231ENST00000494973 DUOX2Q9NRD8 1548 aa20.27■□□□□ 0.84
APTX-231ENST00000494973 RAPGEF3O95398 923 aa20.27■□□□□ 0.84
APTX-231ENST00000494973 NAIPQ13075 1403 aa20.25■□□□□ 0.83
APTX-231ENST00000494973 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
APTX-231ENST00000494973 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
APTX-231ENST00000494973 COL17A1Q9UMD9 1497 aaPredicted RBP20.24■□□□□ 0.83
APTX-231ENST00000494973 ARHGEF40Q8TER5 1519 aa20.24■□□□□ 0.83
APTX-231ENST00000494973 ANKRD50Q9ULJ7 1429 aa20.22■□□□□ 0.83
APTX-231ENST00000494973 ABCA6Q8N139 1617 aa20.22■□□□□ 0.83
APTX-231ENST00000494973 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
APTX-231ENST00000494973 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
APTX-231ENST00000494973 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
APTX-231ENST00000494973 HRCP23327 699 aa20.21■□□□□ 0.83
APTX-231ENST00000494973 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
APTX-231ENST00000494973 A2MP01023 1474 aa20.2■□□□□ 0.82
APTX-231ENST00000494973 DHX29Q7Z478 1369 aaKnown RBP20.18■□□□□ 0.82
APTX-231ENST00000494973 ATP10AO60312 1499 aa20.18■□□□□ 0.82
APTX-231ENST00000494973 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
APTX-231ENST00000494973 BCORL1Q5H9F3 1711 aa20.16■□□□□ 0.82
APTX-231ENST00000494973 YEATS2Q9ULM3 1422 aa20.15■□□□□ 0.82
APTX-231ENST00000494973 AGLP35573 1532 aa20.12■□□□□ 0.81
APTX-231ENST00000494973 UNC13BO14795 1591 aa20.1■□□□□ 0.81
APTX-231ENST00000494973 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
APTX-231ENST00000494973 DEPDC5O75140 1603 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms