RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
CCDC66-222ENST00000494672 ZNF710Q8N1W2 664 aa12.87□□□□□ -0.35
CCDC66-222ENST00000494672 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
CCDC66-222ENST00000494672 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
CCDC66-222ENST00000494672 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
CCDC66-222ENST00000494672 C2orf72A6NCS6 295 aa12.8□□□□□ -0.36
CCDC66-222ENST00000494672 EMP3P54852 163 aa12.79□□□□□ -0.36
CCDC66-222ENST00000494672 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
CCDC66-222ENST00000494672 KIF3CO14782 793 aa12.78□□□□□ -0.36
CCDC66-222ENST00000494672 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
CCDC66-222ENST00000494672 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
CCDC66-222ENST00000494672 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
CCDC66-222ENST00000494672 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
CCDC66-222ENST00000494672 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
CCDC66-222ENST00000494672 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
CCDC66-222ENST00000494672 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
CCDC66-222ENST00000494672 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
CCDC66-222ENST00000494672 ERBB3P21860 1342 aa12.67□□□□□ -0.38
CCDC66-222ENST00000494672 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
CCDC66-222ENST00000494672 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
CCDC66-222ENST00000494672 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
CCDC66-222ENST00000494672 SLC34A2O95436 690 aa12.65□□□□□ -0.38
CCDC66-222ENST00000494672 FOXK1P85037 733 aa12.65□□□□□ -0.38
CCDC66-222ENST00000494672 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
CCDC66-222ENST00000494672 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
CCDC66-222ENST00000494672 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
CCDC66-222ENST00000494672 PDE4AP27815 886 aa12.6□□□□□ -0.39
CCDC66-222ENST00000494672 DSG2Q14126 1118 aa12.6□□□□□ -0.39
CCDC66-222ENST00000494672 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
CCDC66-222ENST00000494672 KHSRPQ92945 711 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■■■□□ 15.9
CCDC66-222ENST00000494672 CRISPLD2Q9H0B8 497 aa12.58□□□□□ -0.4
CCDC66-222ENST00000494672 PCDHGA4Q9Y5G9 962 aa12.58□□□□□ -0.4
CCDC66-222ENST00000494672 VARS2Q5ST30 1063 aaKnown RBP12.57□□□□□ -0.4
CCDC66-222ENST00000494672 NUDT7P0C024 238 aa12.54□□□□□ -0.4
CCDC66-222ENST00000494672 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
CCDC66-222ENST00000494672 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
CCDC66-222ENST00000494672 TBC1D12O60347 775 aa12.53□□□□□ -0.4
CCDC66-222ENST00000494672 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
CCDC66-222ENST00000494672 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
CCDC66-222ENST00000494672 LARP6Q9BRS8 491 aaKnown RBP12.52□□□□□ -0.41
CCDC66-222ENST00000494672 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
CCDC66-222ENST00000494672 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
CCDC66-222ENST00000494672 KRTAP3-3Q9BYR6 98 aa12.48□□□□□ -0.41
CCDC66-222ENST00000494672 KRTAP3-2Q9BYR7 98 aa12.48□□□□□ -0.41
CCDC66-222ENST00000494672 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
CCDC66-222ENST00000494672 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
CCDC66-222ENST00000494672 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
CCDC66-222ENST00000494672 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
CCDC66-222ENST00000494672 MFSD10Q14728 455 aa12.43□□□□□ -0.42
CCDC66-222ENST00000494672 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
CCDC66-222ENST00000494672 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
CCDC66-222ENST00000494672 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC66-222ENST00000494672 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
CCDC66-222ENST00000494672 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
CCDC66-222ENST00000494672 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
CCDC66-222ENST00000494672 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
CCDC66-222ENST00000494672 PBX2P40425 430 aa12.34□□□□□ -0.43
CCDC66-222ENST00000494672 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
CCDC66-222ENST00000494672 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
CCDC66-222ENST00000494672 EVI5O60447 810 aa12.3□□□□□ -0.44
CCDC66-222ENST00000494672 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
CCDC66-222ENST00000494672 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
CCDC66-222ENST00000494672 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
CCDC66-222ENST00000494672 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC66-222ENST00000494672 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
CCDC66-222ENST00000494672 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
CCDC66-222ENST00000494672 CAMK2BQ13554 666 aa12.26□□□□□ -0.45
CCDC66-222ENST00000494672 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
CCDC66-222ENST00000494672 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
CCDC66-222ENST00000494672 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
CCDC66-222ENST00000494672 PTGER2P43116 358 aa12.23□□□□□ -0.45
CCDC66-222ENST00000494672 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
CCDC66-222ENST00000494672 FOSBP53539 338 aa12.22□□□□□ -0.45
CCDC66-222ENST00000494672 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
CCDC66-222ENST00000494672 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
CCDC66-222ENST00000494672 PSEN2P49810 448 aa12.19□□□□□ -0.46
CCDC66-222ENST00000494672 DPYSL4O14531 572 aa12.17□□□□□ -0.46
CCDC66-222ENST00000494672 E2F4Q16254 413 aa12.17□□□□□ -0.46
CCDC66-222ENST00000494672 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
CCDC66-222ENST00000494672 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
CCDC66-222ENST00000494672 KCNK17Q96T54 332 aa12.16□□□□□ -0.46
CCDC66-222ENST00000494672 TK2O00142 265 aa12.15□□□□□ -0.46
CCDC66-222ENST00000494672 RNF166Q96A37 237 aaPredicted RBP12.15□□□□□ -0.46
CCDC66-222ENST00000494672 DMRTA1Q5VZB9 504 aa12.14□□□□□ -0.47
CCDC66-222ENST00000494672 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
CCDC66-222ENST00000494672 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
CCDC66-222ENST00000494672 PTPREP23469 700 aa12.13□□□□□ -0.47
CCDC66-222ENST00000494672 PHF14O94880 888 aa12.11□□□□□ -0.47
CCDC66-222ENST00000494672 PCDHGA10Q9Y5H3 936 aa12.11□□□□□ -0.47
CCDC66-222ENST00000494672 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
CCDC66-222ENST00000494672 FBXW7Q969H0 707 aa12.1□□□□□ -0.47
CCDC66-222ENST00000494672 ADAM33Q9BZ11 813 aa12.1□□□□□ -0.47
CCDC66-222ENST00000494672 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
CCDC66-222ENST00000494672 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
CCDC66-222ENST00000494672 EPAS1Q99814 870 aa12.08□□□□□ -0.48
CCDC66-222ENST00000494672 PDIA6Q15084 440 aa12.06□□□□□ -0.48
CCDC66-222ENST00000494672 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
CCDC66-222ENST00000494672 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
CCDC66-222ENST00000494672 VPS9D1Q9Y2B5 631 aa12.05□□□□□ -0.48
CCDC66-222ENST00000494672 HRO43593 1189 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms