RNA–Protein interactions for RNA: ENST00000494592.1

RGPD2-202, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

TSL 1 (best)

Gene RGPD2, Length 606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-202ENST00000494592 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
RGPD2-202ENST00000494592 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
RGPD2-202ENST00000494592 HS3ST6Q96QI5 342 aa13.27□□□□□ -0.29
RGPD2-202ENST00000494592 HOXB1P14653 301 aaPredicted RBP13.25□□□□□ -0.29
RGPD2-202ENST00000494592 PPP1R37O75864 691 aa13.23□□□□□ -0.29
RGPD2-202ENST00000494592 ERBB3P21860 1342 aa13.22□□□□□ -0.29
RGPD2-202ENST00000494592 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
RGPD2-202ENST00000494592 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
RGPD2-202ENST00000494592 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
RGPD2-202ENST00000494592 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
RGPD2-202ENST00000494592 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
RGPD2-202ENST00000494592 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
RGPD2-202ENST00000494592 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
RGPD2-202ENST00000494592 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
RGPD2-202ENST00000494592 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
RGPD2-202ENST00000494592 KIF3CO14782 793 aa13.13□□□□□ -0.31
RGPD2-202ENST00000494592 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
RGPD2-202ENST00000494592 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
RGPD2-202ENST00000494592 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
RGPD2-202ENST00000494592 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
RGPD2-202ENST00000494592 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.32
RGPD2-202ENST00000494592 KRTAP3-3Q9BYR6 98 aa13.08□□□□□ -0.32
RGPD2-202ENST00000494592 KRTAP3-2Q9BYR7 98 aa13.08□□□□□ -0.32
RGPD2-202ENST00000494592 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
RGPD2-202ENST00000494592 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
RGPD2-202ENST00000494592 NUDT7P0C024 238 aa13.02□□□□□ -0.33
RGPD2-202ENST00000494592 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
RGPD2-202ENST00000494592 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
RGPD2-202ENST00000494592 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
RGPD2-202ENST00000494592 PLPP6Q8IY26 295 aa12.98□□□□□ -0.33
RGPD2-202ENST00000494592 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
RGPD2-202ENST00000494592 SLC34A2O95436 690 aa12.97□□□□□ -0.33
RGPD2-202ENST00000494592 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
RGPD2-202ENST00000494592 FOXK1P85037 733 aa12.95□□□□□ -0.34
RGPD2-202ENST00000494592 DSG2Q14126 1118 aa12.94□□□□□ -0.34
RGPD2-202ENST00000494592 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
RGPD2-202ENST00000494592 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
RGPD2-202ENST00000494592 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
RGPD2-202ENST00000494592 TBC1D12O60347 775 aa12.87□□□□□ -0.35
RGPD2-202ENST00000494592 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
RGPD2-202ENST00000494592 PDE4AP27815 886 aa12.85□□□□□ -0.35
RGPD2-202ENST00000494592 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
RGPD2-202ENST00000494592 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
RGPD2-202ENST00000494592 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
RGPD2-202ENST00000494592 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
RGPD2-202ENST00000494592 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
RGPD2-202ENST00000494592 NCKAP5LQ9HCH0 1330 aa12.8□□□□□ -0.36
RGPD2-202ENST00000494592 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
RGPD2-202ENST00000494592 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
RGPD2-202ENST00000494592 PBX2P40425 430 aa12.78□□□□□ -0.36
RGPD2-202ENST00000494592 RNF166Q96A37 237 aaPredicted RBP12.78□□□□□ -0.36
RGPD2-202ENST00000494592 MYT1LQ9UL68 1186 aa12.78□□□□□ -0.36
RGPD2-202ENST00000494592 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
RGPD2-202ENST00000494592 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
RGPD2-202ENST00000494592 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
RGPD2-202ENST00000494592 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
RGPD2-202ENST00000494592 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
RGPD2-202ENST00000494592 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
RGPD2-202ENST00000494592 PTGER2P43116 358 aa12.72□□□□□ -0.37
RGPD2-202ENST00000494592 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
RGPD2-202ENST00000494592 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.37
RGPD2-202ENST00000494592 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
RGPD2-202ENST00000494592 PSEN2P49810 448 aa12.68□□□□□ -0.38
RGPD2-202ENST00000494592 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
RGPD2-202ENST00000494592 MAP3K9P80192 1104 aa12.66□□□□□ -0.38
RGPD2-202ENST00000494592 KCNH8Q96L42 1107 aa12.66□□□□□ -0.38
RGPD2-202ENST00000494592 MFSD10Q14728 455 aa12.64□□□□□ -0.39
RGPD2-202ENST00000494592 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
RGPD2-202ENST00000494592 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
RGPD2-202ENST00000494592 EVI5O60447 810 aa12.63□□□□□ -0.39
RGPD2-202ENST00000494592 ADGRD1Q6QNK2 874 aa12.63□□□□□ -0.39
RGPD2-202ENST00000494592 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
RGPD2-202ENST00000494592 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
RGPD2-202ENST00000494592 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
RGPD2-202ENST00000494592 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
RGPD2-202ENST00000494592 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.4
RGPD2-202ENST00000494592 FOSBP53539 338 aa12.56□□□□□ -0.4
RGPD2-202ENST00000494592 TK2O00142 265 aa12.55□□□□□ -0.4
RGPD2-202ENST00000494592 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
RGPD2-202ENST00000494592 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
RGPD2-202ENST00000494592 JPH4Q96JJ6 628 aa12.54□□□□□ -0.4
RGPD2-202ENST00000494592 PTPREP23469 700 aa12.53□□□□□ -0.4
RGPD2-202ENST00000494592 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
RGPD2-202ENST00000494592 ZDHHC16Q969W1 377 aa12.52□□□□□ -0.41
RGPD2-202ENST00000494592 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
RGPD2-202ENST00000494592 DPYSL4O14531 572 aa12.48□□□□□ -0.41
RGPD2-202ENST00000494592 HRO43593 1189 aa12.48□□□□□ -0.41
RGPD2-202ENST00000494592 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
RGPD2-202ENST00000494592 KCTD12Q96CX2 325 aaKnown RBP12.46□□□□□ -0.41
RGPD2-202ENST00000494592 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
RGPD2-202ENST00000494592 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
RGPD2-202ENST00000494592 PCDHGA10Q9Y5H3 936 aa12.44□□□□□ -0.42
RGPD2-202ENST00000494592 WDR70Q9NW82 654 aa12.42□□□□□ -0.42
RGPD2-202ENST00000494592 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
RGPD2-202ENST00000494592 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
RGPD2-202ENST00000494592 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.42
RGPD2-202ENST00000494592 PHF14O94880 888 aa12.4□□□□□ -0.42
RGPD2-202ENST00000494592 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
RGPD2-202ENST00000494592 DDX12PQ92771 950 aa12.38□□□□□ -0.43
RGPD2-202ENST00000494592 SLC4A5Q9BY07 1137 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms