RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
ABCA1-204ENST00000494467 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
ABCA1-204ENST00000494467 CFAP74Q9C0B2 1584 aa14.18□□□□□ -0.14
ABCA1-204ENST00000494467 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
ABCA1-204ENST00000494467 ARHGEF5Q12774 1597 aa14.16□□□□□ -0.14
ABCA1-204ENST00000494467 SAMD9LQ8IVG5 1584 aa14.16□□□□□ -0.14
ABCA1-204ENST00000494467 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
ABCA1-204ENST00000494467 PPRC1Q5VV67 1664 aaKnown RBP14.15□□□□□ -0.14
ABCA1-204ENST00000494467 KCNH8Q96L42 1107 aa14.15□□□□□ -0.14
ABCA1-204ENST00000494467 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
ABCA1-204ENST00000494467 CD109Q6YHK3 1445 aa14.14□□□□□ -0.15
ABCA1-204ENST00000494467 CAMSAP2Q08AD1 1489 aa14.13□□□□□ -0.15
ABCA1-204ENST00000494467 NEO1Q92859 1461 aa14.13□□□□□ -0.15
ABCA1-204ENST00000494467 CFDP1Q9UEE9 299 aaPredicted RBP14.13□□□□□ -0.15
ABCA1-204ENST00000494467 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
ABCA1-204ENST00000494467 ABCC1P33527 1531 aa14.12□□□□□ -0.15
ABCA1-204ENST00000494467 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
ABCA1-204ENST00000494467 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
ABCA1-204ENST00000494467 FANCAO15360 1455 aa14.11□□□□□ -0.15
ABCA1-204ENST00000494467 MBD5Q9P267 1494 aa14.11□□□□□ -0.15
ABCA1-204ENST00000494467 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
ABCA1-204ENST00000494467 SHANK2Q9UPX8 1470 aa14.09□□□□□ -0.15
ABCA1-204ENST00000494467 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
ABCA1-204ENST00000494467 TEX14Q8IWB6 1497 aa14.08□□□□□ -0.16
ABCA1-204ENST00000494467 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
ABCA1-204ENST00000494467 FAM69CQ0P6D2 419 aa14.06□□□□□ -0.16
ABCA1-204ENST00000494467 ADGBQ8N7X0 1667 aa14.06□□□□□ -0.16
ABCA1-204ENST00000494467 ABCC5O15440 1437 aa14.06□□□□□ -0.16
ABCA1-204ENST00000494467 DAPK1P53355 1430 aa14.06□□□□□ -0.16
ABCA1-204ENST00000494467 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
ABCA1-204ENST00000494467 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
ABCA1-204ENST00000494467 ARHGEF12Q9NZN5 1544 aa14.05□□□□□ -0.16
ABCA1-204ENST00000494467 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
ABCA1-204ENST00000494467 CCDC141Q6ZP82 1450 aa14.05□□□□□ -0.16
ABCA1-204ENST00000494467 TSPOAP1O95153 1857 aa14.04□□□□□ -0.16
ABCA1-204ENST00000494467 ROCK1Q13464 1354 aa14.04□□□□□ -0.16
ABCA1-204ENST00000494467 PTPRKQ15262 1439 aa14.03□□□□□ -0.16
ABCA1-204ENST00000494467 KDM5CP41229 1560 aa14.03□□□□□ -0.16
ABCA1-204ENST00000494467 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
ABCA1-204ENST00000494467 ADGRL1O94910 1474 aa14.02□□□□□ -0.16
ABCA1-204ENST00000494467 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
ABCA1-204ENST00000494467 PLXNC1O60486 1568 aa14.01□□□□□ -0.17
ABCA1-204ENST00000494467 RTEL1-TNFRSF6BF6WH68 1400 aa14.01□□□□□ -0.17
ABCA1-204ENST00000494467 FAM50AQ14320 339 aaKnown RBP14.01□□□□□ -0.17
ABCA1-204ENST00000494467 ZNF518AQ6AHZ1 1483 aa14□□□□□ -0.17
ABCA1-204ENST00000494467 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
ABCA1-204ENST00000494467 POGZQ7Z3K3 1410 aa13.99□□□□□ -0.17
ABCA1-204ENST00000494467 SCAPERQ9BY12 1400 aa13.99□□□□□ -0.17
ABCA1-204ENST00000494467 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
ABCA1-204ENST00000494467 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
ABCA1-204ENST00000494467 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
ABCA1-204ENST00000494467 HRCP23327 699 aa13.98□□□□□ -0.17
ABCA1-204ENST00000494467 MLH3Q9UHC1 1453 aa13.98□□□□□ -0.17
ABCA1-204ENST00000494467 NCOA1Q15788 1441 aa13.98□□□□□ -0.17
ABCA1-204ENST00000494467 FRMPD1Q5SYB0 1578 aa13.97□□□□□ -0.17
ABCA1-204ENST00000494467 ZNF777Q9ULD5 760 aaPredicted RBP13.97□□□□□ -0.17
ABCA1-204ENST00000494467 DENND4BO75064 1496 aaPredicted RBP13.97□□□□□ -0.17
ABCA1-204ENST00000494467 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
ABCA1-204ENST00000494467 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.17
ABCA1-204ENST00000494467 ZFYVE16Q7Z3T8 1539 aa13.96□□□□□ -0.17
ABCA1-204ENST00000494467 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.17
ABCA1-204ENST00000494467 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
ABCA1-204ENST00000494467 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
ABCA1-204ENST00000494467 MAGI2Q86UL8 1455 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 NAIPQ13075 1403 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 HECW2Q9P2P5 1572 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 ANKRD30AQ9BXX3 1397 aa13.94□□□□□ -0.18
ABCA1-204ENST00000494467 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
ABCA1-204ENST00000494467 SETD5Q9C0A6 1442 aa13.92□□□□□ -0.18
ABCA1-204ENST00000494467 DUOX2Q9NRD8 1548 aa13.9□□□□□ -0.18
ABCA1-204ENST00000494467 COL17A1Q9UMD9 1497 aaPredicted RBP13.9□□□□□ -0.18
ABCA1-204ENST00000494467 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
ABCA1-204ENST00000494467 EIF2AK4Q9P2K8 1649 aaKnown RBP13.9□□□□□ -0.19
ABCA1-204ENST00000494467 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
ABCA1-204ENST00000494467 SPAG9O60271 1321 aaKnown RBP13.89□□□□□ -0.19
ABCA1-204ENST00000494467 ABCA6Q8N139 1617 aa13.87□□□□□ -0.19
ABCA1-204ENST00000494467 ERBINQ96RT1 1412 aa13.87□□□□□ -0.19
ABCA1-204ENST00000494467 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
ABCA1-204ENST00000494467 KIF15Q9NS87 1388 aa13.86□□□□□ -0.19
ABCA1-204ENST00000494467 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
ABCA1-204ENST00000494467 ITGAEP38570 1179 aa13.85□□□□□ -0.19
ABCA1-204ENST00000494467 KDM6BO15054 1643 aa13.85□□□□□ -0.19
ABCA1-204ENST00000494467 DEPDC5O75140 1603 aa13.85□□□□□ -0.19
ABCA1-204ENST00000494467 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
ABCA1-204ENST00000494467 UNC13BO14795 1591 aa13.84□□□□□ -0.19
ABCA1-204ENST00000494467 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
ABCA1-204ENST00000494467 ARHGEF40Q8TER5 1519 aa13.84□□□□□ -0.19
ABCA1-204ENST00000494467 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
ABCA1-204ENST00000494467 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.19
ABCA1-204ENST00000494467 RAPGEF3O95398 923 aa13.83□□□□□ -0.2
ABCA1-204ENST00000494467 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
ABCA1-204ENST00000494467 AGLP35573 1532 aa13.83□□□□□ -0.2
ABCA1-204ENST00000494467 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
ABCA1-204ENST00000494467 A2MP01023 1474 aa13.81□□□□□ -0.2
ABCA1-204ENST00000494467 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
ABCA1-204ENST00000494467 ATP10AO60312 1499 aa13.8□□□□□ -0.2
ABCA1-204ENST00000494467 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms