RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ARHGAP5Q13017 1502 aa21.24■□□□□ 0.99
ERCC3-209ENST00000494464 POGZQ7Z3K3 1410 aa21.24■□□□□ 0.99
ERCC3-209ENST00000494464 CDC42BPAQ5VT25 1732 aa21.21■□□□□ 0.99
ERCC3-209ENST00000494464 MAGI2Q86UL8 1455 aa21.21■□□□□ 0.99
ERCC3-209ENST00000494464 EFCAB2Q5VUJ9 269 aa21.21■□□□□ 0.99
ERCC3-209ENST00000494464 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
ERCC3-209ENST00000494464 ZFYVE16Q7Z3T8 1539 aa21.19■□□□□ 0.98
ERCC3-209ENST00000494464 ABCC1P33527 1531 aa21.16■□□□□ 0.98
ERCC3-209ENST00000494464 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
ERCC3-209ENST00000494464 KDM5CP41229 1560 aa21.16■□□□□ 0.98
ERCC3-209ENST00000494464 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
ERCC3-209ENST00000494464 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
ERCC3-209ENST00000494464 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
ERCC3-209ENST00000494464 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
ERCC3-209ENST00000494464 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
ERCC3-209ENST00000494464 MTUS2Q5JR59 1369 aa21.11■□□□□ 0.97
ERCC3-209ENST00000494464 HECW2Q9P2P5 1572 aa21.11■□□□□ 0.97
ERCC3-209ENST00000494464 LOC105371045A0A1W2PR82 267 aa21.1■□□□□ 0.97
ERCC3-209ENST00000494464 SIGLEC1Q9BZZ2 1709 aa21.1■□□□□ 0.97
ERCC3-209ENST00000494464 GPATCH8Q9UKJ3 1502 aaKnown RBP21.1■□□□□ 0.97
ERCC3-209ENST00000494464 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
ERCC3-209ENST00000494464 SAMD9LQ8IVG5 1584 aa21.09■□□□□ 0.97
ERCC3-209ENST00000494464 TIAM1Q13009 1591 aa21.07■□□□□ 0.96
ERCC3-209ENST00000494464 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
ERCC3-209ENST00000494464 ARHGEF12Q9NZN5 1544 aa21.06■□□□□ 0.96
ERCC3-209ENST00000494464 C9orf84Q5VXU9 1444 aa21.05■□□□□ 0.96
ERCC3-209ENST00000494464 MLH3Q9UHC1 1453 aa21.05■□□□□ 0.96
ERCC3-209ENST00000494464 REREQ9P2R6 1566 aa21.04■□□□□ 0.96
ERCC3-209ENST00000494464 DIP2CQ9Y2E4 1556 aa21.04■□□□□ 0.96
ERCC3-209ENST00000494464 ATP10AO60312 1499 aa21.04■□□□□ 0.96
ERCC3-209ENST00000494464 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
ERCC3-209ENST00000494464 SYCP2Q9BX26 1530 aa21.03■□□□□ 0.96
ERCC3-209ENST00000494464 TRAPPC8Q9Y2L5 1435 aa21.02■□□□□ 0.96
ERCC3-209ENST00000494464 CCNB3Q8WWL7 1395 aa21.02■□□□□ 0.96
ERCC3-209ENST00000494464 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.96
ERCC3-209ENST00000494464 SUPT6HQ7KZ85 1726 aaKnown RBP21.02■□□□□ 0.96
ERCC3-209ENST00000494464 PTPRMP28827 1452 aa21.02■□□□□ 0.95
ERCC3-209ENST00000494464 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.95
ERCC3-209ENST00000494464 AFAP1Q8N556 730 aa21■□□□□ 0.95
ERCC3-209ENST00000494464 RIMS1Q86UR5 1692 aaKnown RBP21■□□□□ 0.95
ERCC3-209ENST00000494464 KIDINS220Q9ULH0 1771 aa20.99■□□□□ 0.95
ERCC3-209ENST00000494464 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
ERCC3-209ENST00000494464 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
ERCC3-209ENST00000494464 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
ERCC3-209ENST00000494464 NCOA2Q15596 1464 aa20.97■□□□□ 0.95
ERCC3-209ENST00000494464 CFDP1Q9UEE9 299 aaPredicted RBP20.96■□□□□ 0.95
ERCC3-209ENST00000494464 LRRC9Q6ZRR7 1453 aa20.95■□□□□ 0.94
ERCC3-209ENST00000494464 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
ERCC3-209ENST00000494464 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
ERCC3-209ENST00000494464 AGLP35573 1532 aa20.92■□□□□ 0.94
ERCC3-209ENST00000494464 ATP7AQ04656 1500 aa20.91■□□□□ 0.94
ERCC3-209ENST00000494464 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
ERCC3-209ENST00000494464 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
ERCC3-209ENST00000494464 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.93
ERCC3-209ENST00000494464 PLXNC1O60486 1568 aa20.86■□□□□ 0.93
ERCC3-209ENST00000494464 CAMSAP2Q08AD1 1489 aa20.86■□□□□ 0.93
ERCC3-209ENST00000494464 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
ERCC3-209ENST00000494464 ADGBQ8N7X0 1667 aa20.84■□□□□ 0.93
ERCC3-209ENST00000494464 MLECQ14165 292 aa20.84■□□□□ 0.93
ERCC3-209ENST00000494464 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.92
ERCC3-209ENST00000494464 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
ERCC3-209ENST00000494464 ARHGEF5Q12774 1597 aa20.82■□□□□ 0.92
ERCC3-209ENST00000494464 LMTK3Q96Q04 1460 aa20.8■□□□□ 0.92
ERCC3-209ENST00000494464 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
ERCC3-209ENST00000494464 KANK4Q5T7N3 995 aaPredicted RBP20.79■□□□□ 0.92
ERCC3-209ENST00000494464 A2MP01023 1474 aa20.78■□□□□ 0.92
ERCC3-209ENST00000494464 MYOM3Q5VTT5 1437 aa20.77■□□□□ 0.92
ERCC3-209ENST00000494464 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
ERCC3-209ENST00000494464 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
ERCC3-209ENST00000494464 C3P01024 1663 aa20.75■□□□□ 0.91
ERCC3-209ENST00000494464 PREX1Q8TCU6 1659 aa20.74■□□□□ 0.91
ERCC3-209ENST00000494464 CNTLNQ9NXG0 1405 aa20.74■□□□□ 0.91
ERCC3-209ENST00000494464 RSPH4AQ5TD94 716 aa20.73■□□□□ 0.91
ERCC3-209ENST00000494464 MAST1Q9Y2H9 1570 aa20.73■□□□□ 0.91
ERCC3-209ENST00000494464 APLP2Q06481 763 aa20.72■□□□□ 0.91
ERCC3-209ENST00000494464 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
ERCC3-209ENST00000494464 PTPN23Q9H3S7 1636 aa20.66■□□□□ 0.9
ERCC3-209ENST00000494464 DHX29Q7Z478 1369 aaKnown RBP20.66■□□□□ 0.9
ERCC3-209ENST00000494464 CROCC2H7BZ55 1655 aa20.66■□□□□ 0.9
ERCC3-209ENST00000494464 CLTCQ00610 1675 aaKnown RBP20.66■□□□□ 0.9
ERCC3-209ENST00000494464 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
ERCC3-209ENST00000494464 FAM135AQ9P2D6 1515 aa20.65■□□□□ 0.9
ERCC3-209ENST00000494464 SETD1BQ9UPS6 1966 aaKnown RBP20.65■□□□□ 0.9
ERCC3-209ENST00000494464 CEBPAP49715 358 aaPredicted RBP20.64■□□□□ 0.89
ERCC3-209ENST00000494464 FGD6Q6ZV73 1430 aa20.63■□□□□ 0.89
ERCC3-209ENST00000494464 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
ERCC3-209ENST00000494464 UHRF1BP1Q6BDS2 1440 aa20.62■□□□□ 0.89
ERCC3-209ENST00000494464 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
ERCC3-209ENST00000494464 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
ERCC3-209ENST00000494464 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
ERCC3-209ENST00000494464 NPATQ14207 1427 aa20.61■□□□□ 0.89
ERCC3-209ENST00000494464 DNMT1P26358 1616 aaKnown RBP20.6■□□□□ 0.89
ERCC3-209ENST00000494464 EIF2AK4Q9P2K8 1649 aaKnown RBP20.6■□□□□ 0.89
ERCC3-209ENST00000494464 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
ERCC3-209ENST00000494464 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
ERCC3-209ENST00000494464 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
ERCC3-209ENST00000494464 KDM5DQ9BY66 1539 aa20.58■□□□□ 0.88
ERCC3-209ENST00000494464 HSPA2P54652 639 aa20.57■□□□□ 0.88
ERCC3-209ENST00000494464 GGT6Q6P531 493 aa20.56■□□□□ 0.88
ERCC3-209ENST00000494464 ABCC5O15440 1437 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms