RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 CRISPLD2Q9H0B8 497 aa18.11■□□□□ 0.49
HMGB3P14-201ENST00000494195 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
HMGB3P14-201ENST00000494195 PDE4AP27815 886 aa18.1■□□□□ 0.49
HMGB3P14-201ENST00000494195 SCUBE2Q9NQ36 999 aa18.08■□□□□ 0.48
HMGB3P14-201ENST00000494195 LHX8Q68G74 356 aa18.07■□□□□ 0.48
HMGB3P14-201ENST00000494195 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
HMGB3P14-201ENST00000494195 KDM2AQ9Y2K7 1162 aa18.07■□□□□ 0.48
HMGB3P14-201ENST00000494195 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
HMGB3P14-201ENST00000494195 TMEM92Q6UXU6 159 aa18.05■□□□□ 0.48
HMGB3P14-201ENST00000494195 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
HMGB3P14-201ENST00000494195 C2orf72A6NCS6 295 aa18.02■□□□□ 0.48
HMGB3P14-201ENST00000494195 KIF3CO14782 793 aa18.02■□□□□ 0.48
HMGB3P14-201ENST00000494195 MFSD10Q14728 455 aa18■□□□□ 0.47
HMGB3P14-201ENST00000494195 WDR70Q9NW82 654 aa17.99■□□□□ 0.47
HMGB3P14-201ENST00000494195 DDX27Q96GQ7 796 aaKnown RBP17.97■□□□□ 0.47
HMGB3P14-201ENST00000494195 FOXK1P85037 733 aa17.95■□□□□ 0.46
HMGB3P14-201ENST00000494195 SLAIN1Q8ND83 568 aa17.94■□□□□ 0.46
HMGB3P14-201ENST00000494195 OTUD5Q96G74 571 aa17.94■□□□□ 0.46
HMGB3P14-201ENST00000494195 DSG2Q14126 1118 aa17.93■□□□□ 0.46
HMGB3P14-201ENST00000494195 PPP1R15BQ5SWA1 713 aa17.93■□□□□ 0.46
HMGB3P14-201ENST00000494195 PLPP6Q8IY26 295 aa17.87■□□□□ 0.45
HMGB3P14-201ENST00000494195 E2F4Q16254 413 aa17.82■□□□□ 0.44
HMGB3P14-201ENST00000494195 CAMK2BQ13554 666 aa17.79■□□□□ 0.44
HMGB3P14-201ENST00000494195 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
HMGB3P14-201ENST00000494195 KCNV2Q8TDN2 545 aa17.74■□□□□ 0.43
HMGB3P14-201ENST00000494195 SNPHO15079 494 aa17.69■□□□□ 0.42
HMGB3P14-201ENST00000494195 SLC34A2O95436 690 aa17.69■□□□□ 0.42
HMGB3P14-201ENST00000494195 EMILIN3Q9NT22 766 aa17.69■□□□□ 0.42
HMGB3P14-201ENST00000494195 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
HMGB3P14-201ENST00000494195 HOXB3P14651 431 aaPredicted RBP17.67■□□□□ 0.42
HMGB3P14-201ENST00000494195 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
HMGB3P14-201ENST00000494195 ARIH1Q9Y4X5 557 aaPredicted RBP17.65■□□□□ 0.42
HMGB3P14-201ENST00000494195 OXER1Q8TDS5 423 aa17.64■□□□□ 0.41
HMGB3P14-201ENST00000494195 PTCD2Q8WV60 388 aaKnown RBP17.63■□□□□ 0.41
HMGB3P14-201ENST00000494195 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
HMGB3P14-201ENST00000494195 RIMBP2O15034 1052 aa17.6■□□□□ 0.41
HMGB3P14-201ENST00000494195 DPYSL4O14531 572 aa17.58■□□□□ 0.4
HMGB3P14-201ENST00000494195 TBC1D12O60347 775 aa17.58■□□□□ 0.4
HMGB3P14-201ENST00000494195 MAP3K9P80192 1104 aa17.57■□□□□ 0.4
HMGB3P14-201ENST00000494195 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
HMGB3P14-201ENST00000494195 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
HMGB3P14-201ENST00000494195 PCDHGA4Q9Y5G9 962 aa17.56■□□□□ 0.4
HMGB3P14-201ENST00000494195 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
HMGB3P14-201ENST00000494195 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
HMGB3P14-201ENST00000494195 PDIA6Q15084 440 aa17.48■□□□□ 0.39
HMGB3P14-201ENST00000494195 ARSIQ5FYB1 569 aa17.47■□□□□ 0.39
HMGB3P14-201ENST00000494195 NBR1Q14596 966 aa17.46■□□□□ 0.39
HMGB3P14-201ENST00000494195 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
HMGB3P14-201ENST00000494195 EVI5O60447 810 aa17.45■□□□□ 0.38
HMGB3P14-201ENST00000494195 HOXB1P14653 301 aaPredicted RBP17.43■□□□□ 0.38
HMGB3P14-201ENST00000494195 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGB3P14-201ENST00000494195 BCANQ96GW7 911 aa17.42■□□□□ 0.38
HMGB3P14-201ENST00000494195 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
HMGB3P14-201ENST00000494195 ST18O60284 1047 aa17.4■□□□□ 0.38
HMGB3P14-201ENST00000494195 NUDT7P0C024 238 aa17.4■□□□□ 0.38
HMGB3P14-201ENST00000494195 FAM163AQ96GL9 167 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P14-201ENST00000494195 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P14-201ENST00000494195 SEMA3EO15041 775 aa17.36■□□□□ 0.37
HMGB3P14-201ENST00000494195 PTGER2P43116 358 aa17.32■□□□□ 0.36
HMGB3P14-201ENST00000494195 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
HMGB3P14-201ENST00000494195 LCE2DQ5TA82 110 aaPredicted RBP17.27■□□□□ 0.36
HMGB3P14-201ENST00000494195 LHX6Q9UPM6 363 aa17.27■□□□□ 0.36
HMGB3P14-201ENST00000494195 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P14-201ENST00000494195 DDX12PQ92771 950 aa17.25■□□□□ 0.35
HMGB3P14-201ENST00000494195 GRXCR2A6NFK2 248 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 EMP3P54852 163 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 SMYD5Q6GMV2 418 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 MARVELD3Q96A59 401 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
HMGB3P14-201ENST00000494195 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
HMGB3P14-201ENST00000494195 PHF14O94880 888 aa17.21■□□□□ 0.35
HMGB3P14-201ENST00000494195 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
HMGB3P14-201ENST00000494195 FOSBP53539 338 aa17.2■□□□□ 0.34
HMGB3P14-201ENST00000494195 ERBB3P21860 1342 aa17.19■□□□□ 0.34
HMGB3P14-201ENST00000494195 ZNF454Q8N9F8 522 aa17.18■□□□□ 0.34
HMGB3P14-201ENST00000494195 EPAS1Q99814 870 aa17.18■□□□□ 0.34
HMGB3P14-201ENST00000494195 PCDHGA10Q9Y5H3 936 aa17.18■□□□□ 0.34
HMGB3P14-201ENST00000494195 TYW1BQ6NUM6 668 aa17.15■□□□□ 0.34
HMGB3P14-201ENST00000494195 OSBPP22059 807 aa17.14■□□□□ 0.33
HMGB3P14-201ENST00000494195 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
HMGB3P14-201ENST00000494195 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
HMGB3P14-201ENST00000494195 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
HMGB3P14-201ENST00000494195 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
HMGB3P14-201ENST00000494195 ZDHHC16Q969W1 377 aa17.11■□□□□ 0.33
HMGB3P14-201ENST00000494195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.33
HMGB3P14-201ENST00000494195 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.32
HMGB3P14-201ENST00000494195 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
HMGB3P14-201ENST00000494195 HS3ST6Q96QI5 342 aa17.06■□□□□ 0.32
HMGB3P14-201ENST00000494195 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
HMGB3P14-201ENST00000494195 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
HMGB3P14-201ENST00000494195 ADAM33Q9BZ11 813 aa17.05■□□□□ 0.32
HMGB3P14-201ENST00000494195 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
HMGB3P14-201ENST00000494195 MAP3K7O43318 606 aa17.03■□□□□ 0.32
HMGB3P14-201ENST00000494195 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
HMGB3P14-201ENST00000494195 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
HMGB3P14-201ENST00000494195 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
HMGB3P14-201ENST00000494195 ZNF687Q8N1G0 1237 aa17■□□□□ 0.31
HMGB3P14-201ENST00000494195 C6orf132Q5T0Z8 1188 aa16.97■□□□□ 0.31
HMGB3P14-201ENST00000494195 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
HMGB3P14-201ENST00000494195 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms