RNA–Protein interactions for RNA: ENST00000494171.5

ALS2CR12-209, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

TSL 2

Gene ALS2CR12, Length 2,075 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-209ENST00000494171 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
ALS2CR12-209ENST00000494171 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
ALS2CR12-209ENST00000494171 DDX27Q96GQ7 796 aaKnown RBP6.97□□□□□ -1.29
ALS2CR12-209ENST00000494171 DDRGK1Q96HY6 314 aa6.97□□□□□ -1.29
ALS2CR12-209ENST00000494171 TSPYL2Q9H2G4 693 aaPredicted RBP6.97□□□□□ -1.29
ALS2CR12-209ENST00000494171 CAMK2BQ13554 666 aa6.96□□□□□ -1.29
ALS2CR12-209ENST00000494171 KCTD17Q8N5Z5 321 aa6.96□□□□□ -1.3
ALS2CR12-209ENST00000494171 CRISPLD2Q9H0B8 497 aa6.96□□□□□ -1.3
ALS2CR12-209ENST00000494171 A6NJR5 290 aa6.95□□□□□ -1.3
ALS2CR12-209ENST00000494171 SOX12O15370 315 aa6.95□□□□□ -1.3
ALS2CR12-209ENST00000494171 TRAK2O60296 914 aa6.95□□□□□ -1.3
ALS2CR12-209ENST00000494171 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
ALS2CR12-209ENST00000494171 ONECUT3O60422 494 aaPredicted RBP6.94□□□□□ -1.3
ALS2CR12-209ENST00000494171 SHROOM4Q9ULL8 1493 aa6.93□□□□□ -1.3
ALS2CR12-209ENST00000494171 ZNF579Q8NAF0 562 aaKnown RBP6.93□□□□□ -1.3
ALS2CR12-209ENST00000494171 CABP2Q9NPB3 220 aa6.93□□□□□ -1.3
ALS2CR12-209ENST00000494171 RAD21O60216 631 aa6.92□□□□□ -1.3
ALS2CR12-209ENST00000494171 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
ALS2CR12-209ENST00000494171 GPR37O15354 613 aa6.9□□□□□ -1.3
ALS2CR12-209ENST00000494171 AKT1S1Q96B36 256 aa6.9□□□□□ -1.3
ALS2CR12-209ENST00000494171 PARP9Q8IXQ6 854 aa6.89□□□□□ -1.31
ALS2CR12-209ENST00000494171 MINK1Q8N4C8 1332 aaPredicted RBP6.89□□□□□ -1.31
ALS2CR12-209ENST00000494171 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
ALS2CR12-209ENST00000494171 CCDC102AQ96A19 550 aa6.89□□□□□ -1.31
ALS2CR12-209ENST00000494171 ZNF428Q96B54 188 aa6.88□□□□□ -1.31
ALS2CR12-209ENST00000494171 GOPCQ9HD26 462 aa6.88□□□□□ -1.31
ALS2CR12-209ENST00000494171 AMHR2Q16671 573 aa6.88□□□□□ -1.31
ALS2CR12-209ENST00000494171 AEBP1Q8IUX7 1158 aa6.88□□□□□ -1.31
ALS2CR12-209ENST00000494171 MTMR7Q9Y216 660 aa6.88□□□□□ -1.31
ALS2CR12-209ENST00000494171 EIF5BO60841 1220 aaKnown RBP6.87□□□□□ -1.31
ALS2CR12-209ENST00000494171 ZNF777Q9ULD5 760 aaPredicted RBP6.87□□□□□ -1.31
ALS2CR12-209ENST00000494171 MS4A4AQ96JQ5 239 aa6.86□□□□□ -1.31
ALS2CR12-209ENST00000494171 DPYSL4O14531 572 aa6.86□□□□□ -1.31
ALS2CR12-209ENST00000494171 MAP2K5Q13163 448 aa6.86□□□□□ -1.31
ALS2CR12-209ENST00000494171 IRF6O14896 467 aa6.85□□□□□ -1.31
ALS2CR12-209ENST00000494171 MCM6Q14566 821 aa6.85□□□□□ -1.31
ALS2CR12-209ENST00000494171 IFNL1Q8IU54 200 aa6.85□□□□□ -1.31
ALS2CR12-209ENST00000494171 REM2Q8IYK8 340 aaPredicted RBP6.85□□□□□ -1.31
ALS2CR12-209ENST00000494171 PCMTD1Q96MG8 357 aaPredicted RBP6.85□□□□□ -1.31
ALS2CR12-209ENST00000494171 CCDC61Q9Y6R9 512 aa6.85□□□□□ -1.31
ALS2CR12-209ENST00000494171 SPDYE16A6NNV3 312 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-209ENST00000494171 PPP1R15BQ5SWA1 713 aa6.84□□□□□ -1.31
ALS2CR12-209ENST00000494171 FOXD4L5Q5VV16 416 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-209ENST00000494171 PROSER2Q86WR7 435 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-209ENST00000494171 FOXD4L4Q8WXT5 416 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-209ENST00000494171 CCDC97Q96F63 343 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-209ENST00000494171 PDIA6Q15084 440 aa6.83□□□□□ -1.32
ALS2CR12-209ENST00000494171 SERPINA10Q9UK55 444 aa6.83□□□□□ -1.32
ALS2CR12-209ENST00000494171 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
ALS2CR12-209ENST00000494171 NUTM2FA1L443 756 aa6.81□□□□□ -1.32
ALS2CR12-209ENST00000494171 TTLL12Q14166 644 aaPredicted RBP6.81□□□□□ -1.32
ALS2CR12-209ENST00000494171 TMCO4Q5TGY1 634 aa6.81□□□□□ -1.32
ALS2CR12-209ENST00000494171 EMILIN3Q9NT22 766 aa6.81□□□□□ -1.32
ALS2CR12-209ENST00000494171 RBM42Q9BTD8 480 aaKnown RBP6.81□□□□□ -1.32
ALS2CR12-209ENST00000494171 CHADLQ6NUI6 762 aa6.8□□□□□ -1.32
ALS2CR12-209ENST00000494171 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
ALS2CR12-209ENST00000494171 GNPATO15228 680 aa6.79□□□□□ -1.32
ALS2CR12-209ENST00000494171 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
ALS2CR12-209ENST00000494171 RETREG2Q8NC44 543 aa6.79□□□□□ -1.32
ALS2CR12-209ENST00000494171 POM121Q96HA1 1249 aa6.79□□□□□ -1.32
ALS2CR12-209ENST00000494171 GZF1Q9H116 711 aaPredicted RBP6.79□□□□□ -1.32
ALS2CR12-209ENST00000494171 MS4A1P11836 297 aa6.78□□□□□ -1.32
ALS2CR12-209ENST00000494171 MAP3K13O43283 966 aa6.78□□□□□ -1.32
ALS2CR12-209ENST00000494171 GIGYF2Q6Y7W6 1299 aaKnown RBP6.78□□□□□ -1.32
ALS2CR12-209ENST00000494171 GPHNQ9NQX3 736 aaPredicted RBP6.78□□□□□ -1.32
ALS2CR12-209ENST00000494171 FARP1Q9Y4F1 1045 aaPredicted RBP6.78□□□□□ -1.32
ALS2CR12-209ENST00000494171 GRXCR2A6NFK2 248 aa6.77□□□□□ -1.33
ALS2CR12-209ENST00000494171 PITPNM1O00562 1244 aa6.77□□□□□ -1.33
ALS2CR12-209ENST00000494171 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
ALS2CR12-209ENST00000494171 FECHP22830 423 aa6.77□□□□□ -1.33
ALS2CR12-209ENST00000494171 SH3D19Q5HYK7 790 aa6.77□□□□□ -1.33
ALS2CR12-209ENST00000494171 CDK11AQ9UQ88 783 aaPredicted RBP6.77□□□□□ -1.33
ALS2CR12-209ENST00000494171 IRF5Q13568 498 aa6.75□□□□□ -1.33
ALS2CR12-209ENST00000494171 HIC1Q14526 733 aa6.75□□□□□ -1.33
ALS2CR12-209ENST00000494171 PLSCR2Q9NRY7 297 aa6.75□□□□□ -1.33
ALS2CR12-209ENST00000494171 HSP90B1P14625 803 aaKnown RBP6.74□□□□□ -1.33
ALS2CR12-209ENST00000494171 KIF12Q96FN5 646 aa6.74□□□□□ -1.33
ALS2CR12-209ENST00000494171 FCHSD2O94868 740 aa6.73□□□□□ -1.33
ALS2CR12-209ENST00000494171 HMGB1P09429 215 aaKnown RBP6.73□□□□□ -1.33
ALS2CR12-209ENST00000494171 DSG2Q14126 1118 aa6.73□□□□□ -1.33
ALS2CR12-209ENST00000494171 REPIN1Q9BWE0 567 aaKnown RBP6.73□□□□□ -1.33
ALS2CR12-209ENST00000494171 GOLGA2Q08379 1002 aa6.72□□□□□ -1.33
ALS2CR12-209ENST00000494171 OXER1Q8TDS5 423 aa6.72□□□□□ -1.33
ALS2CR12-209ENST00000494171 OSBPP22059 807 aa6.71□□□□□ -1.34
ALS2CR12-209ENST00000494171 SKIV2LQ15477 1246 aaKnown RBP6.71□□□□□ -1.34
ALS2CR12-209ENST00000494171 FBXW7Q969H0 707 aa6.71□□□□□ -1.34
ALS2CR12-209ENST00000494171 ATP1B4Q9UN42 357 aaPredicted RBP6.71□□□□□ -1.34
ALS2CR12-209ENST00000494171 COG6Q9Y2V7 657 aa6.71□□□□□ -1.34
ALS2CR12-209ENST00000494171 PUS7Q96PZ0 661 aaKnown RBP6.7□□□□□ -1.34
ALS2CR12-209ENST00000494171 PAK3O75914 559 aaPredicted RBP6.7□□□□□ -1.34
ALS2CR12-209ENST00000494171 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
ALS2CR12-209ENST00000494171 E9PSI1 815 aa6.69□□□□□ -1.34
ALS2CR12-209ENST00000494171 PROCA1Q8NCQ7 364 aaPredicted RBP6.69□□□□□ -1.34
ALS2CR12-209ENST00000494171 SPDYE5A6NIY4 337 aa6.69□□□□□ -1.34
ALS2CR12-209ENST00000494171 PPP1R15AO75807 674 aaPredicted RBP6.67□□□□□ -1.34
ALS2CR12-209ENST00000494171 MAP3K9P80192 1104 aa6.67□□□□□ -1.34
ALS2CR12-209ENST00000494171 FOXK1P85037 733 aa6.67□□□□□ -1.34
ALS2CR12-209ENST00000494171 TMUB1Q9BVT8 246 aa6.66□□□□□ -1.34
ALS2CR12-209ENST00000494171 CHMP4AQ9BY43 222 aa6.66□□□□□ -1.34
ALS2CR12-209ENST00000494171 POLR3EQ9NVU0 708 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms