RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 MADDQ8WXG6 1647 aa19.36■□□□□ 0.69
PDS5B-208ENST00000493653 ZFYVE16Q7Z3T8 1539 aa19.36■□□□□ 0.69
PDS5B-208ENST00000493653 PLCH2O75038 1416 aa19.34■□□□□ 0.69
PDS5B-208ENST00000493653 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
PDS5B-208ENST00000493653 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
PDS5B-208ENST00000493653 PTPRMP28827 1452 aa19.33■□□□□ 0.68
PDS5B-208ENST00000493653 CLIP1P30622 1438 aa19.33■□□□□ 0.68
PDS5B-208ENST00000493653 ARID4BQ4LE39 1312 aaPredicted RBP19.32■□□□□ 0.68
PDS5B-208ENST00000493653 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
PDS5B-208ENST00000493653 KCNA4P22459 653 aa19.31■□□□□ 0.68
PDS5B-208ENST00000493653 CDK11AQ9UQ88 783 aaPredicted RBP19.31■□□□□ 0.68
PDS5B-208ENST00000493653 YEATS2Q9ULM3 1422 aa19.31■□□□□ 0.68
PDS5B-208ENST00000493653 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
PDS5B-208ENST00000493653 CASKIN1Q8WXD9 1431 aa19.3■□□□□ 0.68
PDS5B-208ENST00000493653 ARHGAP5Q13017 1502 aa19.3■□□□□ 0.68
PDS5B-208ENST00000493653 RIMS1Q86UR5 1692 aaKnown RBP19.3■□□□□ 0.68
PDS5B-208ENST00000493653 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
PDS5B-208ENST00000493653 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
PDS5B-208ENST00000493653 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
PDS5B-208ENST00000493653 PREX2Q70Z35 1606 aa19.25■□□□□ 0.67
PDS5B-208ENST00000493653 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
PDS5B-208ENST00000493653 ZNF518AQ6AHZ1 1483 aa19.22■□□□□ 0.67
PDS5B-208ENST00000493653 ADRA2BP18089 450 aa19.22■□□□□ 0.67
PDS5B-208ENST00000493653 EFCAB2Q5VUJ9 269 aa19.22■□□□□ 0.67
PDS5B-208ENST00000493653 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
PDS5B-208ENST00000493653 KDM5CP41229 1560 aa19.22■□□□□ 0.67
PDS5B-208ENST00000493653 FER1L4A9Z1Z3 1794 aa19.21■□□□□ 0.67
PDS5B-208ENST00000493653 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
PDS5B-208ENST00000493653 ABCC1P33527 1531 aa19.2■□□□□ 0.66
PDS5B-208ENST00000493653 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
PDS5B-208ENST00000493653 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
PDS5B-208ENST00000493653 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
PDS5B-208ENST00000493653 ATP10AO60312 1499 aa19.16■□□□□ 0.66
PDS5B-208ENST00000493653 LMTK3Q96Q04 1460 aa19.16■□□□□ 0.66
PDS5B-208ENST00000493653 DIP2CQ9Y2E4 1556 aa19.16■□□□□ 0.66
PDS5B-208ENST00000493653 ABCA6Q8N139 1617 aa19.15■□□□□ 0.66
PDS5B-208ENST00000493653 ARHGEF12Q9NZN5 1544 aa19.14■□□□□ 0.65
PDS5B-208ENST00000493653 MLECQ14165 292 aa19.13■□□□□ 0.65
PDS5B-208ENST00000493653 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
PDS5B-208ENST00000493653 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
PDS5B-208ENST00000493653 SAMD9LQ8IVG5 1584 aa19.1■□□□□ 0.65
PDS5B-208ENST00000493653 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
PDS5B-208ENST00000493653 SYCP2Q9BX26 1530 aa19.09■□□□□ 0.65
PDS5B-208ENST00000493653 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.64
PDS5B-208ENST00000493653 MYT1LQ9UL68 1186 aa19.08■□□□□ 0.64
PDS5B-208ENST00000493653 MLH3Q9UHC1 1453 aa19.08■□□□□ 0.64
PDS5B-208ENST00000493653 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
PDS5B-208ENST00000493653 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
PDS5B-208ENST00000493653 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
PDS5B-208ENST00000493653 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
PDS5B-208ENST00000493653 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
PDS5B-208ENST00000493653 PREX1Q8TCU6 1659 aa19.02■□□□□ 0.64
PDS5B-208ENST00000493653 ZNF777Q9ULD5 760 aaPredicted RBP19.01■□□□□ 0.63
PDS5B-208ENST00000493653 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
PDS5B-208ENST00000493653 AGLP35573 1532 aa19■□□□□ 0.63
PDS5B-208ENST00000493653 CCNB3Q8WWL7 1395 aa19■□□□□ 0.63
PDS5B-208ENST00000493653 INO80Q9ULG1 1556 aaPredicted RBP18.99■□□□□ 0.63
PDS5B-208ENST00000493653 HSPA2P54652 639 aa18.99■□□□□ 0.63
PDS5B-208ENST00000493653 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
PDS5B-208ENST00000493653 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
PDS5B-208ENST00000493653 C3P01024 1663 aa18.95■□□□□ 0.62
PDS5B-208ENST00000493653 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
PDS5B-208ENST00000493653 CEBPAP49715 358 aaPredicted RBP18.94■□□□□ 0.62
PDS5B-208ENST00000493653 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
PDS5B-208ENST00000493653 SPAG9O60271 1321 aaKnown RBP18.93■□□□□ 0.62
PDS5B-208ENST00000493653 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
PDS5B-208ENST00000493653 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
PDS5B-208ENST00000493653 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
PDS5B-208ENST00000493653 HNRNPMP52272 730 aaKnown RBP eCLIP18.91■□□□□ 0.626e-7■■■□□ 17.5
PDS5B-208ENST00000493653 CNTLNQ9NXG0 1405 aa18.89■□□□□ 0.61
PDS5B-208ENST00000493653 ESF1Q9H501 851 aaKnown RBP18.88■□□□□ 0.61
PDS5B-208ENST00000493653 NCOA2Q15596 1464 aa18.88■□□□□ 0.61
PDS5B-208ENST00000493653 MROH2AA6NES4 1674 aa18.88■□□□□ 0.61
PDS5B-208ENST00000493653 A2MP01023 1474 aa18.87■□□□□ 0.61
PDS5B-208ENST00000493653 ADGBQ8N7X0 1667 aa18.87■□□□□ 0.61
PDS5B-208ENST00000493653 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
PDS5B-208ENST00000493653 CAMSAP2Q08AD1 1489 aa18.85■□□□□ 0.61
PDS5B-208ENST00000493653 ZNF644Q9H582 1327 aaPredicted RBP18.85■□□□□ 0.61
PDS5B-208ENST00000493653 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
PDS5B-208ENST00000493653 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
PDS5B-208ENST00000493653 FBXO41Q8TF61 875 aa18.83■□□□□ 0.6
PDS5B-208ENST00000493653 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
PDS5B-208ENST00000493653 CCDC141Q6ZP82 1450 aa18.82■□□□□ 0.6
PDS5B-208ENST00000493653 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
PDS5B-208ENST00000493653 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
PDS5B-208ENST00000493653 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
PDS5B-208ENST00000493653 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
PDS5B-208ENST00000493653 NPATQ14207 1427 aa18.78■□□□□ 0.6
PDS5B-208ENST00000493653 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
PDS5B-208ENST00000493653 ZNF142P52746 1687 aaPredicted RBP18.76■□□□□ 0.59
PDS5B-208ENST00000493653 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
PDS5B-208ENST00000493653 ZMYM3Q14202 1370 aa18.74■□□□□ 0.59
PDS5B-208ENST00000493653 GGT6Q6P531 493 aa18.73■□□□□ 0.59
PDS5B-208ENST00000493653 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
PDS5B-208ENST00000493653 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.59
PDS5B-208ENST00000493653 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
PDS5B-208ENST00000493653 PTPRKQ15262 1439 aa18.71■□□□□ 0.59
PDS5B-208ENST00000493653 CEP170BQ9Y4F5 1589 aaPredicted RBP18.71■□□□□ 0.59
PDS5B-208ENST00000493653 DHX29Q7Z478 1369 aaKnown RBP18.7■□□□□ 0.58
PDS5B-208ENST00000493653 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms