RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 NACADO15069 1562 aa13.39□□□□□ -0.27
TPR-208ENST00000492973 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
TPR-208ENST00000492973 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
TPR-208ENST00000492973 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
TPR-208ENST00000492973 SCUBE2Q9NQ36 999 aa13.37□□□□□ -0.27
TPR-208ENST00000492973 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
TPR-208ENST00000492973 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
TPR-208ENST00000492973 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
TPR-208ENST00000492973 TMEM92Q6UXU6 159 aa13.35□□□□□ -0.27
TPR-208ENST00000492973 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
TPR-208ENST00000492973 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
TPR-208ENST00000492973 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
TPR-208ENST00000492973 KIF3CO14782 793 aa13.3□□□□□ -0.28
TPR-208ENST00000492973 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.29
TPR-208ENST00000492973 C2orf72A6NCS6 295 aa13.26□□□□□ -0.29
TPR-208ENST00000492973 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
TPR-208ENST00000492973 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
TPR-208ENST00000492973 PDE4AP27815 886 aa13.24□□□□□ -0.29
TPR-208ENST00000492973 MFSD10Q14728 455 aa13.22□□□□□ -0.29
TPR-208ENST00000492973 FOXK1P85037 733 aa13.2□□□□□ -0.3
TPR-208ENST00000492973 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
TPR-208ENST00000492973 DSG2Q14126 1118 aa13.18□□□□□ -0.3
TPR-208ENST00000492973 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
TPR-208ENST00000492973 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
TPR-208ENST00000492973 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
TPR-208ENST00000492973 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
TPR-208ENST00000492973 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
TPR-208ENST00000492973 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
TPR-208ENST00000492973 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
TPR-208ENST00000492973 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
TPR-208ENST00000492973 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
TPR-208ENST00000492973 SNPHO15079 494 aa13.05□□□□□ -0.32
TPR-208ENST00000492973 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
TPR-208ENST00000492973 SLC34A2O95436 690 aa13.04□□□□□ -0.32
TPR-208ENST00000492973 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
TPR-208ENST00000492973 E2F4Q16254 413 aa13.02□□□□□ -0.33
TPR-208ENST00000492973 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
TPR-208ENST00000492973 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
TPR-208ENST00000492973 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
TPR-208ENST00000492973 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
TPR-208ENST00000492973 UNC13AQ9UPW8 1703 aa12.97□□□□□ -0.33
TPR-208ENST00000492973 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
TPR-208ENST00000492973 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
TPR-208ENST00000492973 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
TPR-208ENST00000492973 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
TPR-208ENST00000492973 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
TPR-208ENST00000492973 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
TPR-208ENST00000492973 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
TPR-208ENST00000492973 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPR-208ENST00000492973 P3H3Q8IVL6 736 aa12.92□□□□□ -0.34
TPR-208ENST00000492973 ST18O60284 1047 aa12.91□□□□□ -0.34
TPR-208ENST00000492973 LCE2DQ5TA82 110 aaPredicted RBP12.91□□□□□ -0.34
TPR-208ENST00000492973 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
TPR-208ENST00000492973 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
TPR-208ENST00000492973 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
TPR-208ENST00000492973 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
TPR-208ENST00000492973 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
TPR-208ENST00000492973 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
TPR-208ENST00000492973 DPYSL4O14531 572 aa12.88□□□□□ -0.35
TPR-208ENST00000492973 TBC1D12O60347 775 aa12.88□□□□□ -0.35
TPR-208ENST00000492973 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.351e-12■■□□□ 12.1
TPR-208ENST00000492973 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
TPR-208ENST00000492973 NUDT7P0C024 238 aa12.82□□□□□ -0.36
TPR-208ENST00000492973 PDIA6Q15084 440 aa12.82□□□□□ -0.36
TPR-208ENST00000492973 EVI5O60447 810 aa12.81□□□□□ -0.36
TPR-208ENST00000492973 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
TPR-208ENST00000492973 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
TPR-208ENST00000492973 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
TPR-208ENST00000492973 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
TPR-208ENST00000492973 EMP3P54852 163 aa12.74□□□□□ -0.37
TPR-208ENST00000492973 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
TPR-208ENST00000492973 PTGER2P43116 358 aa12.73□□□□□ -0.37
TPR-208ENST00000492973 ERBB3P21860 1342 aa12.68□□□□□ -0.38
TPR-208ENST00000492973 SEMA3EO15041 775 aa12.68□□□□□ -0.38
TPR-208ENST00000492973 FOSBP53539 338 aa12.67□□□□□ -0.38
TPR-208ENST00000492973 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
TPR-208ENST00000492973 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
TPR-208ENST00000492973 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
TPR-208ENST00000492973 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
TPR-208ENST00000492973 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
TPR-208ENST00000492973 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
TPR-208ENST00000492973 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
TPR-208ENST00000492973 DDX12PQ92771 950 aa12.65□□□□□ -0.38
TPR-208ENST00000492973 PHF14O94880 888 aa12.64□□□□□ -0.39
TPR-208ENST00000492973 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
TPR-208ENST00000492973 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
TPR-208ENST00000492973 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
TPR-208ENST00000492973 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
TPR-208ENST00000492973 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
TPR-208ENST00000492973 EIF4G1Q04637 1599 aaKnown RBP12.62□□□□□ -0.39
TPR-208ENST00000492973 NBR1Q14596 966 aa12.62□□□□□ -0.39
TPR-208ENST00000492973 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
TPR-208ENST00000492973 POTEMA6NI47 508 aa12.61□□□□□ -0.39
TPR-208ENST00000492973 GRXCR2A6NFK2 248 aa12.6□□□□□ -0.39
TPR-208ENST00000492973 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
TPR-208ENST00000492973 EPAS1Q99814 870 aa12.6□□□□□ -0.39
TPR-208ENST00000492973 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
TPR-208ENST00000492973 OSBPP22059 807 aa12.58□□□□□ -0.4
TPR-208ENST00000492973 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
TPR-208ENST00000492973 FBXW7Q969H0 707 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms