RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
SND1-216ENST00000492840 MAP3K13O43283 966 aa9.33□□□□□ -0.92
SND1-216ENST00000492840 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
SND1-216ENST00000492840 ARID3AQ99856 593 aa9.32□□□□□ -0.92
SND1-216ENST00000492840 HRCP23327 699 aa9.31□□□□□ -0.92
SND1-216ENST00000492840 KIF12Q96FN5 646 aa9.31□□□□□ -0.92
SND1-216ENST00000492840 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
SND1-216ENST00000492840 GPR37O15354 613 aa9.28□□□□□ -0.92
SND1-216ENST00000492840 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
SND1-216ENST00000492840 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
SND1-216ENST00000492840 PPP1R15BQ5SWA1 713 aa9.27□□□□□ -0.93
SND1-216ENST00000492840 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
SND1-216ENST00000492840 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
SND1-216ENST00000492840 PDIA6Q15084 440 aa9.25□□□□□ -0.93
SND1-216ENST00000492840 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
SND1-216ENST00000492840 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
SND1-216ENST00000492840 DPYSL4O14531 572 aa9.24□□□□□ -0.93
SND1-216ENST00000492840 PRKAR2AP13861 404 aaKnown RBP9.23□□□□□ -0.93
SND1-216ENST00000492840 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
SND1-216ENST00000492840 EMILIN3Q9NT22 766 aa9.23□□□□□ -0.93
SND1-216ENST00000492840 FLIIQ13045 1269 aa9.22□□□□□ -0.93
SND1-216ENST00000492840 GPHNQ9NQX3 736 aaPredicted RBP9.22□□□□□ -0.93
SND1-216ENST00000492840 APBB1O00213 710 aa9.21□□□□□ -0.94
SND1-216ENST00000492840 NPM2Q86SE8 214 aaKnown RBP9.21□□□□□ -0.94
SND1-216ENST00000492840 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
SND1-216ENST00000492840 CCDC102AQ96A19 550 aa9.2□□□□□ -0.94
SND1-216ENST00000492840 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
SND1-216ENST00000492840 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
SND1-216ENST00000492840 AMHR2Q16671 573 aa9.19□□□□□ -0.94
SND1-216ENST00000492840 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
SND1-216ENST00000492840 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
SND1-216ENST00000492840 IRF6O14896 467 aa9.15□□□□□ -0.94
SND1-216ENST00000492840 TMEM106CQ9BVX2 250 aa9.15□□□□□ -0.94
SND1-216ENST00000492840 DSG2Q14126 1118 aa9.14□□□□□ -0.95
SND1-216ENST00000492840 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
SND1-216ENST00000492840 A6NJR5 290 aa9.13□□□□□ -0.95
SND1-216ENST00000492840 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
SND1-216ENST00000492840 PDIA4P13667 645 aaKnown RBP9.12□□□□□ -0.95
SND1-216ENST00000492840 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.951e-18■□□□□ 10
SND1-216ENST00000492840 ILDR1Q86SU0 546 aaPredicted RBP9.11□□□□□ -0.95
SND1-216ENST00000492840 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
SND1-216ENST00000492840 PHF12Q96QT6 1004 aa9.11□□□□□ -0.95
SND1-216ENST00000492840 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
SND1-216ENST00000492840 GNPATO15228 680 aa9.1□□□□□ -0.95
SND1-216ENST00000492840 TRAK2O60296 914 aa9.1□□□□□ -0.95
SND1-216ENST00000492840 CLUAP1Q96AJ1 413 aa9.1□□□□□ -0.95
SND1-216ENST00000492840 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
SND1-216ENST00000492840 FOXK1P85037 733 aa9.08□□□□□ -0.96
SND1-216ENST00000492840 ZRANB1Q9UGI0 708 aa9.08□□□□□ -0.96
SND1-216ENST00000492840 TRPC6Q9Y210 931 aa9.08□□□□□ -0.96
SND1-216ENST00000492840 FECHP22830 423 aa9.07□□□□□ -0.96
SND1-216ENST00000492840 TTLL12Q14166 644 aaPredicted RBP9.07□□□□□ -0.96
SND1-216ENST00000492840 OSBPP22059 807 aa9.06□□□□□ -0.96
SND1-216ENST00000492840 HIC1Q14526 733 aa9.06□□□□□ -0.96
SND1-216ENST00000492840 TMC2Q8TDI7 906 aa9.06□□□□□ -0.96
SND1-216ENST00000492840 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
SND1-216ENST00000492840 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
SND1-216ENST00000492840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.961e-10■□□□□ 8.4
SND1-216ENST00000492840 CCDC9Q9Y3X0 531 aaKnown RBP9.06□□□□□ -0.96
SND1-216ENST00000492840 FCHSD2O94868 740 aa9.05□□□□□ -0.96
SND1-216ENST00000492840 MCM6Q14566 821 aa9.05□□□□□ -0.96
SND1-216ENST00000492840 RB1CC1Q8TDY2 1594 aa9.04□□□□□ -0.96
SND1-216ENST00000492840 GIGYF2Q6Y7W6 1299 aaKnown RBP9.04□□□□□ -0.96
SND1-216ENST00000492840 MS4A1P11836 297 aa9.03□□□□□ -0.96
SND1-216ENST00000492840 PLPP6Q8IY26 295 aa9.03□□□□□ -0.96
SND1-216ENST00000492840 MICALL2Q8IY33 904 aa9.03□□□□□ -0.96
SND1-216ENST00000492840 CD44P16070 742 aaKnown RBP9.02□□□□□ -0.97
SND1-216ENST00000492840 MS4A3Q96HJ5 214 aa9.02□□□□□ -0.97
SND1-216ENST00000492840 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
SND1-216ENST00000492840 SH3D19Q5HYK7 790 aa9.01□□□□□ -0.97
SND1-216ENST00000492840 PTGER2P43116 358 aa8.99□□□□□ -0.97
SND1-216ENST00000492840 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
SND1-216ENST00000492840 PROSER2Q86WR7 435 aaPredicted RBP8.99□□□□□ -0.97
SND1-216ENST00000492840 REPIN1Q9BWE0 567 aaKnown RBP8.99□□□□□ -0.97
SND1-216ENST00000492840 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
SND1-216ENST00000492840 TIE1P35590 1138 aa8.98□□□□□ -0.97
SND1-216ENST00000492840 C2orf72A6NCS6 295 aa8.97□□□□□ -0.97
SND1-216ENST00000492840 PRIM1P49642 420 aaKnown RBP8.97□□□□□ -0.97
SND1-216ENST00000492840 PTGDRQ13258 359 aa8.97□□□□□ -0.97
SND1-216ENST00000492840 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
SND1-216ENST00000492840 KIF3CO14782 793 aa8.96□□□□□ -0.98
SND1-216ENST00000492840 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.98
SND1-216ENST00000492840 DDX12PQ92771 950 aa8.96□□□□□ -0.98
SND1-216ENST00000492840 TRAIPQ9BWF2 469 aa8.96□□□□□ -0.98
SND1-216ENST00000492840 ZNF777Q9ULD5 760 aaPredicted RBP8.96□□□□□ -0.98
SND1-216ENST00000492840 FNBP4Q8N3X1 1017 aaPredicted RBP8.95□□□□□ -0.98
SND1-216ENST00000492840 TMUB1Q9BVT8 246 aa8.95□□□□□ -0.98
SND1-216ENST00000492840 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
SND1-216ENST00000492840 POM121Q96HA1 1249 aa8.94□□□□□ -0.98
SND1-216ENST00000492840 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
SND1-216ENST00000492840 SKIV2LQ15477 1246 aaKnown RBP8.92□□□□□ -0.98
SND1-216ENST00000492840 PDCD7Q8N8D1 485 aaKnown RBP8.92□□□□□ -0.98
SND1-216ENST00000492840 CCDC97Q96F63 343 aaPredicted RBP8.92□□□□□ -0.98
SND1-216ENST00000492840 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
SND1-216ENST00000492840 BMP2KQ9NSY1 1161 aaPredicted RBP8.92□□□□□ -0.98
SND1-216ENST00000492840 CLCN1P35523 988 aa8.91□□□□□ -0.98
SND1-216ENST00000492840 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
SND1-216ENST00000492840 TRIM35Q9UPQ4 493 aa8.91□□□□□ -0.98
SND1-216ENST00000492840 RAD21O60216 631 aa8.9□□□□□ -0.98
SND1-216ENST00000492840 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms