RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 EMP3P54852 163 aa9.98□□□□□ -0.81
VPS36-205ENST00000492650 CDAN1Q8IWY9 1227 aa9.98□□□□□ -0.81
VPS36-205ENST00000492650 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
VPS36-205ENST00000492650 NKX1-1Q15270 411 aaPredicted RBP9.95□□□□□ -0.82
VPS36-205ENST00000492650 C2orf72A6NCS6 295 aa9.93□□□□□ -0.82
VPS36-205ENST00000492650 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
VPS36-205ENST00000492650 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
VPS36-205ENST00000492650 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
VPS36-205ENST00000492650 DNAJC5Q9H3Z4 198 aa9.92□□□□□ -0.82
VPS36-205ENST00000492650 RYDENQ9NUL5 291 aaKnown RBP9.92□□□□□ -0.82
VPS36-205ENST00000492650 KIF3CO14782 793 aa9.9□□□□□ -0.82
VPS36-205ENST00000492650 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
VPS36-205ENST00000492650 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
VPS36-205ENST00000492650 AMER1Q5JTC6 1135 aaPredicted RBP9.87□□□□□ -0.83
VPS36-205ENST00000492650 ERBB3P21860 1342 aa9.86□□□□□ -0.83
VPS36-205ENST00000492650 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
VPS36-205ENST00000492650 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
VPS36-205ENST00000492650 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
VPS36-205ENST00000492650 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
VPS36-205ENST00000492650 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
VPS36-205ENST00000492650 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.843e-9■■■□□ 19.1
VPS36-205ENST00000492650 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
VPS36-205ENST00000492650 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
VPS36-205ENST00000492650 GPHNQ9NQX3 736 aaPredicted RBP9.8□□□□□ -0.84
VPS36-205ENST00000492650 FOXK1P85037 733 aa9.78□□□□□ -0.84
VPS36-205ENST00000492650 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
VPS36-205ENST00000492650 SLC34A2O95436 690 aa9.77□□□□□ -0.85
VPS36-205ENST00000492650 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
VPS36-205ENST00000492650 NUDT7P0C024 238 aa9.76□□□□□ -0.85
VPS36-205ENST00000492650 DSG2Q14126 1118 aa9.76□□□□□ -0.85
VPS36-205ENST00000492650 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
VPS36-205ENST00000492650 PDE4AP27815 886 aa9.73□□□□□ -0.85
VPS36-205ENST00000492650 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
VPS36-205ENST00000492650 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
VPS36-205ENST00000492650 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
VPS36-205ENST00000492650 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
VPS36-205ENST00000492650 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
VPS36-205ENST00000492650 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
VPS36-205ENST00000492650 TBC1D12O60347 775 aa9.7□□□□□ -0.86
VPS36-205ENST00000492650 PTCD2Q8WV60 388 aaKnown RBP9.7□□□□□ -0.86
VPS36-205ENST00000492650 LHX6Q9UPM6 363 aa9.7□□□□□ -0.86
VPS36-205ENST00000492650 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
VPS36-205ENST00000492650 PPP1R15BQ5SWA1 713 aa9.69□□□□□ -0.86
VPS36-205ENST00000492650 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
VPS36-205ENST00000492650 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
VPS36-205ENST00000492650 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
VPS36-205ENST00000492650 UPF1Q92900 1129 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS36-205ENST00000492650 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
VPS36-205ENST00000492650 SPRYD3Q8NCJ5 442 aa9.64□□□□□ -0.87
VPS36-205ENST00000492650 CADPS2Q86UW7 1296 aa9.63□□□□□ -0.87
VPS36-205ENST00000492650 OXER1Q8TDS5 423 aa9.62□□□□□ -0.87
VPS36-205ENST00000492650 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
VPS36-205ENST00000492650 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
VPS36-205ENST00000492650 PSDA5PKW4 1024 aaPredicted RBP9.6□□□□□ -0.87
VPS36-205ENST00000492650 CFAP44Q96MT7 982 aa9.6□□□□□ -0.87
VPS36-205ENST00000492650 PAXIP1Q6ZW49 1069 aaPredicted RBP9.59□□□□□ -0.87
VPS36-205ENST00000492650 MFSD10Q14728 455 aa9.58□□□□□ -0.88
VPS36-205ENST00000492650 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
VPS36-205ENST00000492650 PBX2P40425 430 aa9.57□□□□□ -0.88
VPS36-205ENST00000492650 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
VPS36-205ENST00000492650 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPS36-205ENST00000492650 PPP4R3BQ5MIZ7 849 aa9.56□□□□□ -0.88
VPS36-205ENST00000492650 POTEEQ6S8J3 1075 aa9.54□□□□□ -0.88
VPS36-205ENST00000492650 ARHGAP33O14559 1287 aa9.53□□□□□ -0.88
VPS36-205ENST00000492650 EVI5O60447 810 aa9.53□□□□□ -0.88
VPS36-205ENST00000492650 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
VPS36-205ENST00000492650 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
VPS36-205ENST00000492650 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
VPS36-205ENST00000492650 PTGER2P43116 358 aa9.49□□□□□ -0.89
VPS36-205ENST00000492650 PSEN2P49810 448 aa9.49□□□□□ -0.89
VPS36-205ENST00000492650 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
VPS36-205ENST00000492650 KCNH8Q96L42 1107 aa9.49□□□□□ -0.89
VPS36-205ENST00000492650 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
VPS36-205ENST00000492650 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
VPS36-205ENST00000492650 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
VPS36-205ENST00000492650 FOSBP53539 338 aa9.45□□□□□ -0.9
VPS36-205ENST00000492650 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
VPS36-205ENST00000492650 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
VPS36-205ENST00000492650 CAMK2BQ13554 666 aa9.44□□□□□ -0.9
VPS36-205ENST00000492650 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
VPS36-205ENST00000492650 DPYSL4O14531 572 aa9.43□□□□□ -0.9
VPS36-205ENST00000492650 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
VPS36-205ENST00000492650 BCL2L12Q9HB09 334 aa9.42□□□□□ -0.9
VPS36-205ENST00000492650 TK2O00142 265 aa9.41□□□□□ -0.9
VPS36-205ENST00000492650 PTPREP23469 700 aa9.41□□□□□ -0.9
VPS36-205ENST00000492650 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
VPS36-205ENST00000492650 ADAM33Q9BZ11 813 aa9.39□□□□□ -0.91
VPS36-205ENST00000492650 E2F4Q16254 413 aa9.38□□□□□ -0.91
VPS36-205ENST00000492650 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
VPS36-205ENST00000492650 PHF14O94880 888 aa9.36□□□□□ -0.91
VPS36-205ENST00000492650 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
VPS36-205ENST00000492650 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
VPS36-205ENST00000492650 HRO43593 1189 aa9.35□□□□□ -0.91
VPS36-205ENST00000492650 DDX12PQ92771 950 aa9.34□□□□□ -0.91
VPS36-205ENST00000492650 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
VPS36-205ENST00000492650 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
VPS36-205ENST00000492650 EPAS1Q99814 870 aa9.33□□□□□ -0.92
VPS36-205ENST00000492650 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
VPS36-205ENST00000492650 SPDYE16A6NNV3 312 aaPredicted RBP9.31□□□□□ -0.92
VPS36-205ENST00000492650 PDIA6Q15084 440 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms