RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 ARHGAP5Q13017 1502 aa28.16■■■□□ 2.1
LMNB1-206ENST00000492190 EFCAB2Q5VUJ9 269 aa28.12■■■□□ 2.09
LMNB1-206ENST00000492190 DENND4BO75064 1496 aaPredicted RBP28.12■■■□□ 2.09
LMNB1-206ENST00000492190 ADGRL1O94910 1474 aa28.12■■■□□ 2.09
LMNB1-206ENST00000492190 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
LMNB1-206ENST00000492190 SCAPERQ9BY12 1400 aa28.09■■■□□ 2.09
LMNB1-206ENST00000492190 MAP3K1Q13233 1512 aa28.08■■■□□ 2.08
LMNB1-206ENST00000492190 SUPT6HQ7KZ85 1726 aaKnown RBP28.06■■■□□ 2.08
LMNB1-206ENST00000492190 LRRC9Q6ZRR7 1453 aa28.05■■■□□ 2.08
LMNB1-206ENST00000492190 POGZQ7Z3K3 1410 aa28.03■■■□□ 2.08
LMNB1-206ENST00000492190 ZMYM4Q5VZL5 1548 aa28.02■■■□□ 2.08
LMNB1-206ENST00000492190 ITSN2Q9NZM3 1697 aa28.02■■■□□ 2.08
LMNB1-206ENST00000492190 SAMD9LQ8IVG5 1584 aa28.02■■■□□ 2.08
LMNB1-206ENST00000492190 ABCC1P33527 1531 aa28.02■■■□□ 2.08
LMNB1-206ENST00000492190 ARHGEF12Q9NZN5 1544 aa28.02■■■□□ 2.08
LMNB1-206ENST00000492190 CCNB3Q8WWL7 1395 aa28.01■■■□□ 2.07
LMNB1-206ENST00000492190 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
LMNB1-206ENST00000492190 NCOA2Q15596 1464 aa28.01■■■□□ 2.07
LMNB1-206ENST00000492190 ARHGEF40Q8TER5 1519 aa27.97■■■□□ 2.07
LMNB1-206ENST00000492190 KDM4FA0A1W2PPD8 638 aa27.95■■■□□ 2.06
LMNB1-206ENST00000492190 KDM5CP41229 1560 aa27.94■■■□□ 2.06
LMNB1-206ENST00000492190 YEATS2Q9ULM3 1422 aa27.93■■■□□ 2.06
LMNB1-206ENST00000492190 TRAPPC8Q9Y2L5 1435 aa27.93■■■□□ 2.06
LMNB1-206ENST00000492190 CFDP1Q9UEE9 299 aaPredicted RBP27.93■■■□□ 2.06
LMNB1-206ENST00000492190 ZNF777Q9ULD5 760 aaPredicted RBP27.93■■■□□ 2.06
LMNB1-206ENST00000492190 ZNF518AQ6AHZ1 1483 aa27.93■■■□□ 2.06
LMNB1-206ENST00000492190 AFAP1Q8N556 730 aa27.92■■■□□ 2.06
LMNB1-206ENST00000492190 ZFYVE16Q7Z3T8 1539 aa27.92■■■□□ 2.06
LMNB1-206ENST00000492190 SYCP2Q9BX26 1530 aa27.91■■■□□ 2.06
LMNB1-206ENST00000492190 MAGI2Q86UL8 1455 aa27.9■■■□□ 2.06
LMNB1-206ENST00000492190 SIGLEC1Q9BZZ2 1709 aa27.9■■■□□ 2.06
LMNB1-206ENST00000492190 ZNF644Q9H582 1327 aaPredicted RBP27.88■■■□□ 2.05
LMNB1-206ENST00000492190 HECW2Q9P2P5 1572 aa27.86■■■□□ 2.05
LMNB1-206ENST00000492190 APLP2Q06481 763 aa27.85■■■□□ 2.05
LMNB1-206ENST00000492190 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
LMNB1-206ENST00000492190 HNRNPMP52272 730 aaKnown RBP eCLIP27.84■■■□□ 2.05
LMNB1-206ENST00000492190 KIDINS220Q9ULH0 1771 aa27.83■■■□□ 2.05
LMNB1-206ENST00000492190 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
LMNB1-206ENST00000492190 ABCA6Q8N139 1617 aa27.81■■■□□ 2.04
LMNB1-206ENST00000492190 MLH3Q9UHC1 1453 aa27.81■■■□□ 2.04
LMNB1-206ENST00000492190 DIP2CQ9Y2E4 1556 aa27.8■■■□□ 2.04
LMNB1-206ENST00000492190 MBD5Q9P267 1494 aa27.79■■■□□ 2.04
LMNB1-206ENST00000492190 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
LMNB1-206ENST00000492190 CAMSAP2Q08AD1 1489 aa27.78■■■□□ 2.04
LMNB1-206ENST00000492190 ATP10AO60312 1499 aa27.77■■■□□ 2.04
LMNB1-206ENST00000492190 ADAMTSL3P82987 1691 aa27.77■■■□□ 2.04
LMNB1-206ENST00000492190 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
LMNB1-206ENST00000492190 MYOM3Q5VTT5 1437 aa27.75■■■□□ 2.03
LMNB1-206ENST00000492190 INO80Q9ULG1 1556 aaPredicted RBP27.73■■■□□ 2.03
LMNB1-206ENST00000492190 C9orf84Q5VXU9 1444 aa27.72■■■□□ 2.03
LMNB1-206ENST00000492190 ARID4BQ4LE39 1312 aaPredicted RBP27.7■■■□□ 2.03
LMNB1-206ENST00000492190 MYT1LQ9UL68 1186 aa27.7■■■□□ 2.02
LMNB1-206ENST00000492190 ATP7AQ04656 1500 aa27.7■■■□□ 2.02
LMNB1-206ENST00000492190 SPAG9O60271 1321 aaKnown RBP27.69■■■□□ 2.02
LMNB1-206ENST00000492190 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
LMNB1-206ENST00000492190 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
LMNB1-206ENST00000492190 ARHGEF5Q12774 1597 aa27.68■■■□□ 2.02
LMNB1-206ENST00000492190 MADDQ8WXG6 1647 aa27.67■■■□□ 2.02
LMNB1-206ENST00000492190 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
LMNB1-206ENST00000492190 PTPN23Q9H3S7 1636 aa27.64■■■□□ 2.02
LMNB1-206ENST00000492190 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
LMNB1-206ENST00000492190 RIMS1Q86UR5 1692 aaKnown RBP27.6■■■□□ 2.01
LMNB1-206ENST00000492190 ADGBQ8N7X0 1667 aa27.6■■■□□ 2.01
LMNB1-206ENST00000492190 FER1L4A9Z1Z3 1794 aa27.59■■■□□ 2.01
LMNB1-206ENST00000492190 AGLP35573 1532 aa27.58■■■□□ 2.01
LMNB1-206ENST00000492190 MLECQ14165 292 aa27.58■■■□□ 2.01
LMNB1-206ENST00000492190 RTEL1-TNFRSF6BF6WH68 1400 aa27.58■■■□□ 2
LMNB1-206ENST00000492190 PLXNC1O60486 1568 aa27.56■■■□□ 2
LMNB1-206ENST00000492190 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
LMNB1-206ENST00000492190 TCOF1Q13428 1488 aaKnown RBP27.56■■■□□ 2
LMNB1-206ENST00000492190 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
LMNB1-206ENST00000492190 PTPRMP28827 1452 aa27.54■■■□□ 2
LMNB1-206ENST00000492190 CROCC2H7BZ55 1655 aa27.53■■■□□ 2
LMNB1-206ENST00000492190 MAST1Q9Y2H9 1570 aa27.53■■■□□ 2
LMNB1-206ENST00000492190 A2MP01023 1474 aa27.53■■■□□ 2
LMNB1-206ENST00000492190 DNMT1P26358 1616 aaKnown RBP27.5■■□□□ 1.99
LMNB1-206ENST00000492190 ABCC5O15440 1437 aa27.48■■□□□ 1.99
LMNB1-206ENST00000492190 TSPY4P0CV99 314 aa27.47■■□□□ 1.99
LMNB1-206ENST00000492190 TSPY10P0CW01 314 aa27.47■■□□□ 1.99
LMNB1-206ENST00000492190 DHX29Q7Z478 1369 aaKnown RBP27.44■■□□□ 1.98
LMNB1-206ENST00000492190 DAPK1P53355 1430 aa27.43■■□□□ 1.98
LMNB1-206ENST00000492190 SHANK2Q9UPX8 1470 aa27.41■■□□□ 1.98
LMNB1-206ENST00000492190 FAM50AQ14320 339 aaKnown RBP27.37■■□□□ 1.97
LMNB1-206ENST00000492190 C3P01024 1663 aa27.36■■□□□ 1.97
LMNB1-206ENST00000492190 CLTCQ00610 1675 aaKnown RBP27.34■■□□□ 1.97
LMNB1-206ENST00000492190 PLPPR3Q6T4P5 718 aa27.33■■□□□ 1.97
LMNB1-206ENST00000492190 MROH2AA6NES4 1674 aa27.31■■□□□ 1.96
LMNB1-206ENST00000492190 CEBPAP49715 358 aaPredicted RBP27.31■■□□□ 1.96
LMNB1-206ENST00000492190 GGT6Q6P531 493 aa27.31■■□□□ 1.96
LMNB1-206ENST00000492190 KIF3BO15066 747 aa27.3■■□□□ 1.96
LMNB1-206ENST00000492190 CHIC2Q9UKJ5 165 aa27.3■■□□□ 1.96
LMNB1-206ENST00000492190 DUOX2Q9NRD8 1548 aa27.3■■□□□ 1.96
LMNB1-206ENST00000492190 EIF2AK4Q9P2K8 1649 aaKnown RBP27.29■■□□□ 1.96
LMNB1-206ENST00000492190 RNF17Q9BXT8 1623 aaKnown RBP27.28■■□□□ 1.96
LMNB1-206ENST00000492190 PTPRKQ15262 1439 aa27.28■■□□□ 1.96
LMNB1-206ENST00000492190 KIF15Q9NS87 1388 aa27.28■■□□□ 1.96
LMNB1-206ENST00000492190 SETD1BQ9UPS6 1966 aaKnown RBP27.28■■□□□ 1.96
LMNB1-206ENST00000492190 CNTLNQ9NXG0 1405 aa27.27■■□□□ 1.96
LMNB1-206ENST00000492190 ADGRL2O95490 1459 aa27.26■■□□□ 1.95
LMNB1-206ENST00000492190 RRP7BPQ9NSQ0 103 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms