RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ARHGAP5Q13017 1502 aa14.75□□□□□ -0.05
BRCA1-219ENST00000491747 EHBP1L1Q8N3D4 1523 aa14.75□□□□□ -0.05
BRCA1-219ENST00000491747 EFCAB2Q5VUJ9 269 aa14.73□□□□□ -0.05
BRCA1-219ENST00000491747 ADGRL1O94910 1474 aa14.72□□□□□ -0.05
BRCA1-219ENST00000491747 GPATCH8Q9UKJ3 1502 aaKnown RBP14.72□□□□□ -0.05
BRCA1-219ENST00000491747 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-219ENST00000491747 SCAPERQ9BY12 1400 aa14.71□□□□□ -0.05
BRCA1-219ENST00000491747 KANK4Q5T7N3 995 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-219ENST00000491747 MAP3K1Q13233 1512 aa14.7□□□□□ -0.06
BRCA1-219ENST00000491747 LRRC9Q6ZRR7 1453 aa14.7□□□□□ -0.06
BRCA1-219ENST00000491747 SUPT6HQ7KZ85 1726 aaKnown RBP14.7□□□□□ -0.06
BRCA1-219ENST00000491747 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
BRCA1-219ENST00000491747 SAMD9LQ8IVG5 1584 aa14.68□□□□□ -0.06
BRCA1-219ENST00000491747 ARHGEF12Q9NZN5 1544 aa14.68□□□□□ -0.06
BRCA1-219ENST00000491747 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
BRCA1-219ENST00000491747 ITSN2Q9NZM3 1697 aa14.67□□□□□ -0.06
BRCA1-219ENST00000491747 POGZQ7Z3K3 1410 aa14.67□□□□□ -0.06
BRCA1-219ENST00000491747 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
BRCA1-219ENST00000491747 ABCC1P33527 1531 aa14.67□□□□□ -0.06
BRCA1-219ENST00000491747 ZMYM4Q5VZL5 1548 aa14.66□□□□□ -0.06
BRCA1-219ENST00000491747 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-219ENST00000491747 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
BRCA1-219ENST00000491747 KDM4FA0A1W2PPD8 638 aa14.63□□□□□ -0.07
BRCA1-219ENST00000491747 AFAP1Q8N556 730 aa14.63□□□□□ -0.07
BRCA1-219ENST00000491747 CFDP1Q9UEE9 299 aaPredicted RBP14.63□□□□□ -0.07
BRCA1-219ENST00000491747 YEATS2Q9ULM3 1422 aa14.63□□□□□ -0.07
BRCA1-219ENST00000491747 KDM5CP41229 1560 aa14.63□□□□□ -0.07
BRCA1-219ENST00000491747 ARHGEF40Q8TER5 1519 aa14.63□□□□□ -0.07
BRCA1-219ENST00000491747 SIGLEC1Q9BZZ2 1709 aa14.63□□□□□ -0.07
BRCA1-219ENST00000491747 SYCP2Q9BX26 1530 aa14.62□□□□□ -0.07
BRCA1-219ENST00000491747 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-219ENST00000491747 ZNF518AQ6AHZ1 1483 aa14.62□□□□□ -0.07
BRCA1-219ENST00000491747 ZFYVE16Q7Z3T8 1539 aa14.61□□□□□ -0.07
BRCA1-219ENST00000491747 HNRNPMP52272 730 aaKnown RBP eCLIP14.6□□□□□ -0.07
BRCA1-219ENST00000491747 APLP2Q06481 763 aa14.6□□□□□ -0.07
BRCA1-219ENST00000491747 MAGI2Q86UL8 1455 aa14.59□□□□□ -0.07
BRCA1-219ENST00000491747 HECW2Q9P2P5 1572 aa14.58□□□□□ -0.07
BRCA1-219ENST00000491747 KIDINS220Q9ULH0 1771 aa14.58□□□□□ -0.08
BRCA1-219ENST00000491747 KIAA1107Q9UPP5 1409 aa14.57□□□□□ -0.08
BRCA1-219ENST00000491747 ABCA6Q8N139 1617 aa14.57□□□□□ -0.08
BRCA1-219ENST00000491747 PLEKHH2Q8IVE3 1493 aa14.56□□□□□ -0.08
BRCA1-219ENST00000491747 MBD5Q9P267 1494 aa14.56□□□□□ -0.08
BRCA1-219ENST00000491747 CAMSAP2Q08AD1 1489 aa14.56□□□□□ -0.08
BRCA1-219ENST00000491747 MLH3Q9UHC1 1453 aa14.56□□□□□ -0.08
BRCA1-219ENST00000491747 DIP2CQ9Y2E4 1556 aa14.55□□□□□ -0.08
BRCA1-219ENST00000491747 BCORL1Q5H9F3 1711 aa14.55□□□□□ -0.08
BRCA1-219ENST00000491747 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
BRCA1-219ENST00000491747 ATP10AO60312 1499 aa14.54□□□□□ -0.08
BRCA1-219ENST00000491747 ADAMTSL3P82987 1691 aa14.53□□□□□ -0.08
BRCA1-219ENST00000491747 INO80Q9ULG1 1556 aaPredicted RBP14.52□□□□□ -0.08
BRCA1-219ENST00000491747 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.08
BRCA1-219ENST00000491747 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.08
BRCA1-219ENST00000491747 ARID4BQ4LE39 1312 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-219ENST00000491747 C9orf84Q5VXU9 1444 aa14.51□□□□□ -0.09
BRCA1-219ENST00000491747 ATP7AQ04656 1500 aa14.51□□□□□ -0.09
BRCA1-219ENST00000491747 MIA2Q96PC5 1412 aa14.5□□□□□ -0.09
BRCA1-219ENST00000491747 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
BRCA1-219ENST00000491747 ARHGEF5Q12774 1597 aa14.49□□□□□ -0.09
BRCA1-219ENST00000491747 PTPN23Q9H3S7 1636 aa14.49□□□□□ -0.09
BRCA1-219ENST00000491747 REREQ9P2R6 1566 aa14.49□□□□□ -0.09
BRCA1-219ENST00000491747 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
BRCA1-219ENST00000491747 MADDQ8WXG6 1647 aa14.48□□□□□ -0.09
BRCA1-219ENST00000491747 CCDC141Q6ZP82 1450 aa14.48□□□□□ -0.09
BRCA1-219ENST00000491747 FGD6Q6ZV73 1430 aa14.46□□□□□ -0.09
BRCA1-219ENST00000491747 ADGBQ8N7X0 1667 aa14.46□□□□□ -0.09
BRCA1-219ENST00000491747 MLECQ14165 292 aa14.45□□□□□ -0.1
BRCA1-219ENST00000491747 RIMS1Q86UR5 1692 aaKnown RBP14.45□□□□□ -0.1
BRCA1-219ENST00000491747 TCOF1Q13428 1488 aaKnown RBP14.44□□□□□ -0.1
BRCA1-219ENST00000491747 RTEL1-TNFRSF6BF6WH68 1400 aa14.44□□□□□ -0.1
BRCA1-219ENST00000491747 FER1L4A9Z1Z3 1794 aa14.44□□□□□ -0.1
BRCA1-219ENST00000491747 RSPH4AQ5TD94 716 aa14.44□□□□□ -0.1
BRCA1-219ENST00000491747 AGLP35573 1532 aa14.43□□□□□ -0.1
BRCA1-219ENST00000491747 PLXNC1O60486 1568 aa14.43□□□□□ -0.1
BRCA1-219ENST00000491747 CROCC2H7BZ55 1655 aa14.43□□□□□ -0.1
BRCA1-219ENST00000491747 MAST1Q9Y2H9 1570 aa14.42□□□□□ -0.1
BRCA1-219ENST00000491747 A2MP01023 1474 aa14.42□□□□□ -0.1
BRCA1-219ENST00000491747 PTPRMP28827 1452 aa14.42□□□□□ -0.1
BRCA1-219ENST00000491747 TRIM26Q12899 539 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-219ENST00000491747 DNMT1P26358 1616 aaKnown RBP14.41□□□□□ -0.1
BRCA1-219ENST00000491747 ABCC5O15440 1437 aa14.4□□□□□ -0.1
BRCA1-219ENST00000491747 TSPY4P0CV99 314 aa14.39□□□□□ -0.11
BRCA1-219ENST00000491747 TSPY10P0CW01 314 aa14.39□□□□□ -0.11
BRCA1-219ENST00000491747 DAPK1P53355 1430 aa14.38□□□□□ -0.11
BRCA1-219ENST00000491747 DHX29Q7Z478 1369 aaKnown RBP14.37□□□□□ -0.11
BRCA1-219ENST00000491747 FAM50AQ14320 339 aaKnown RBP14.36□□□□□ -0.11
BRCA1-219ENST00000491747 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
BRCA1-219ENST00000491747 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.11
BRCA1-219ENST00000491747 C3P01024 1663 aa14.33□□□□□ -0.12
BRCA1-219ENST00000491747 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.12
BRCA1-219ENST00000491747 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
BRCA1-219ENST00000491747 CEBPAP49715 358 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-219ENST00000491747 GGT6Q6P531 493 aa14.32□□□□□ -0.12
BRCA1-219ENST00000491747 PTPRKQ15262 1439 aa14.31□□□□□ -0.12
BRCA1-219ENST00000491747 KIF3BO15066 747 aa14.31□□□□□ -0.12
BRCA1-219ENST00000491747 RRP7BPQ9NSQ0 103 aa14.3□□□□□ -0.12
BRCA1-219ENST00000491747 DUOX2Q9NRD8 1548 aa14.3□□□□□ -0.12
BRCA1-219ENST00000491747 MROH2AA6NES4 1674 aa14.29□□□□□ -0.12
BRCA1-219ENST00000491747 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
BRCA1-219ENST00000491747 KIF15Q9NS87 1388 aa14.29□□□□□ -0.12
BRCA1-219ENST00000491747 RNF17Q9BXT8 1623 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms