RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 LMTK3Q96Q04 1460 aa18.09■□□□□ 0.49
TMEM39A-211ENST00000491685 PLCH2O75038 1416 aa18.09■□□□□ 0.49
TMEM39A-211ENST00000491685 YEATS2Q9ULM3 1422 aa18.09■□□□□ 0.49
TMEM39A-211ENST00000491685 POGZQ7Z3K3 1410 aa18.07■□□□□ 0.48
TMEM39A-211ENST00000491685 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
TMEM39A-211ENST00000491685 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
TMEM39A-211ENST00000491685 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
TMEM39A-211ENST00000491685 PREX2Q70Z35 1606 aa18.03■□□□□ 0.48
TMEM39A-211ENST00000491685 CASKIN1Q8WXD9 1431 aa18.03■□□□□ 0.48
TMEM39A-211ENST00000491685 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
TMEM39A-211ENST00000491685 ARID4BQ4LE39 1312 aaPredicted RBP18.02■□□□□ 0.48
TMEM39A-211ENST00000491685 FER1L4A9Z1Z3 1794 aa18.02■□□□□ 0.48
TMEM39A-211ENST00000491685 CDC42BPAQ5VT25 1732 aa18.01■□□□□ 0.47
TMEM39A-211ENST00000491685 MAGI2Q86UL8 1455 aa18.01■□□□□ 0.47
TMEM39A-211ENST00000491685 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
TMEM39A-211ENST00000491685 KDM5CP41229 1560 aa18■□□□□ 0.47
TMEM39A-211ENST00000491685 CLIP1P30622 1438 aa17.99■□□□□ 0.47
TMEM39A-211ENST00000491685 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
TMEM39A-211ENST00000491685 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
TMEM39A-211ENST00000491685 CDK11AQ9UQ88 783 aaPredicted RBP17.97■□□□□ 0.47
TMEM39A-211ENST00000491685 ABCC1P33527 1531 aa17.97■□□□□ 0.47
TMEM39A-211ENST00000491685 ABCA6Q8N139 1617 aa17.95■□□□□ 0.46
TMEM39A-211ENST00000491685 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
TMEM39A-211ENST00000491685 DIP2CQ9Y2E4 1556 aa17.95■□□□□ 0.46
TMEM39A-211ENST00000491685 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
TMEM39A-211ENST00000491685 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
TMEM39A-211ENST00000491685 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
TMEM39A-211ENST00000491685 ATP10AO60312 1499 aa17.93■□□□□ 0.46
TMEM39A-211ENST00000491685 SAMD9LQ8IVG5 1584 aa17.9■□□□□ 0.46
TMEM39A-211ENST00000491685 MLECQ14165 292 aa17.89■□□□□ 0.45
TMEM39A-211ENST00000491685 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
TMEM39A-211ENST00000491685 TRAPPC8Q9Y2L5 1435 aa17.89■□□□□ 0.45
TMEM39A-211ENST00000491685 REREQ9P2R6 1566 aa17.88■□□□□ 0.45
TMEM39A-211ENST00000491685 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
TMEM39A-211ENST00000491685 AFAP1Q8N556 730 aa17.88■□□□□ 0.45
TMEM39A-211ENST00000491685 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
TMEM39A-211ENST00000491685 HSPA2P54652 639 aa17.86■□□□□ 0.45
TMEM39A-211ENST00000491685 MLH3Q9UHC1 1453 aa17.85■□□□□ 0.45
TMEM39A-211ENST00000491685 SYCP2Q9BX26 1530 aa17.84■□□□□ 0.45
TMEM39A-211ENST00000491685 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
TMEM39A-211ENST00000491685 GPATCH8Q9UKJ3 1502 aaKnown RBP17.83■□□□□ 0.45
TMEM39A-211ENST00000491685 C3P01024 1663 aa17.81■□□□□ 0.44
TMEM39A-211ENST00000491685 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
TMEM39A-211ENST00000491685 AGLP35573 1532 aa17.79■□□□□ 0.44
TMEM39A-211ENST00000491685 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
TMEM39A-211ENST00000491685 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
TMEM39A-211ENST00000491685 INO80Q9ULG1 1556 aaPredicted RBP17.79■□□□□ 0.44
TMEM39A-211ENST00000491685 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
TMEM39A-211ENST00000491685 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
TMEM39A-211ENST00000491685 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
TMEM39A-211ENST00000491685 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
TMEM39A-211ENST00000491685 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
TMEM39A-211ENST00000491685 ATP7AQ04656 1500 aa17.74■□□□□ 0.43
TMEM39A-211ENST00000491685 MTUS2Q5JR59 1369 aa17.73■□□□□ 0.43
TMEM39A-211ENST00000491685 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
TMEM39A-211ENST00000491685 PLXNC1O60486 1568 aa17.72■□□□□ 0.43
TMEM39A-211ENST00000491685 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
TMEM39A-211ENST00000491685 DISP3Q9P2K9 1392 aa17.71■□□□□ 0.43
TMEM39A-211ENST00000491685 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.438e-7■■■□□ 16.7
TMEM39A-211ENST00000491685 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
TMEM39A-211ENST00000491685 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
TMEM39A-211ENST00000491685 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
TMEM39A-211ENST00000491685 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
TMEM39A-211ENST00000491685 SOCS7O14512 581 aa17.69■□□□□ 0.42
TMEM39A-211ENST00000491685 CLTCQ00610 1675 aaKnown RBP17.68■□□□□ 0.42
TMEM39A-211ENST00000491685 ADGBQ8N7X0 1667 aa17.68■□□□□ 0.42
TMEM39A-211ENST00000491685 ILDR2Q71H61 639 aa17.68■□□□□ 0.42
TMEM39A-211ENST00000491685 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
TMEM39A-211ENST00000491685 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
TMEM39A-211ENST00000491685 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
TMEM39A-211ENST00000491685 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
TMEM39A-211ENST00000491685 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
TMEM39A-211ENST00000491685 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
TMEM39A-211ENST00000491685 A2MP01023 1474 aa17.64■□□□□ 0.41
TMEM39A-211ENST00000491685 NCOA2Q15596 1464 aa17.63■□□□□ 0.41
TMEM39A-211ENST00000491685 PTPRTO14522 1441 aa17.62■□□□□ 0.41
TMEM39A-211ENST00000491685 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
TMEM39A-211ENST00000491685 CAMSAP2Q08AD1 1489 aa17.61■□□□□ 0.41
TMEM39A-211ENST00000491685 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
TMEM39A-211ENST00000491685 IQSEC2Q5JU85 1478 aa17.6■□□□□ 0.41
TMEM39A-211ENST00000491685 MYO3AQ8NEV4 1616 aa17.6■□□□□ 0.41
TMEM39A-211ENST00000491685 LTBP4Q8N2S1 1624 aa17.59■□□□□ 0.41
TMEM39A-211ENST00000491685 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.41
TMEM39A-211ENST00000491685 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.4
TMEM39A-211ENST00000491685 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
TMEM39A-211ENST00000491685 CCDC141Q6ZP82 1450 aa17.56■□□□□ 0.4
TMEM39A-211ENST00000491685 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
TMEM39A-211ENST00000491685 NPATQ14207 1427 aa17.55■□□□□ 0.4
TMEM39A-211ENST00000491685 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
TMEM39A-211ENST00000491685 RTEL1-TNFRSF6BF6WH68 1400 aa17.54■□□□□ 0.4
TMEM39A-211ENST00000491685 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
TMEM39A-211ENST00000491685 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
TMEM39A-211ENST00000491685 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
TMEM39A-211ENST00000491685 PTPRKQ15262 1439 aa17.52■□□□□ 0.4
TMEM39A-211ENST00000491685 CEP170BQ9Y4F5 1589 aaPredicted RBP17.51■□□□□ 0.39
TMEM39A-211ENST00000491685 GGT6Q6P531 493 aa17.5■□□□□ 0.39
TMEM39A-211ENST00000491685 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
TMEM39A-211ENST00000491685 DHX29Q7Z478 1369 aaKnown RBP17.48■□□□□ 0.39
TMEM39A-211ENST00000491685 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
TMEM39A-211ENST00000491685 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms