RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 AKNAQ7Z591 1439 aa30.64■■■□□ 2.5
SEC22A-209ENST00000491366 SUPT6HQ7KZ85 1726 aaKnown RBP30.64■■■□□ 2.5
SEC22A-209ENST00000491366 EFCAB2Q5VUJ9 269 aa30.64■■■□□ 2.5
SEC22A-209ENST00000491366 NCOA2Q15596 1464 aa30.63■■■□□ 2.49
SEC22A-209ENST00000491366 CDC42BPAQ5VT25 1732 aa30.63■■■□□ 2.49
SEC22A-209ENST00000491366 GPATCH8Q9UKJ3 1502 aaKnown RBP30.62■■■□□ 2.49
SEC22A-209ENST00000491366 CDC42BPBQ9Y5S2 1711 aa30.61■■■□□ 2.49
SEC22A-209ENST00000491366 ADGRL1O94910 1474 aa30.57■■■□□ 2.48
SEC22A-209ENST00000491366 ZNF777Q9ULD5 760 aaPredicted RBP30.55■■■□□ 2.48
SEC22A-209ENST00000491366 RAPGEF3O95398 923 aa30.54■■■□□ 2.48
SEC22A-209ENST00000491366 CFDP1Q9UEE9 299 aaPredicted RBP30.54■■■□□ 2.48
SEC22A-209ENST00000491366 DENND4BO75064 1496 aaPredicted RBP30.52■■■□□ 2.48
SEC22A-209ENST00000491366 SCAPERQ9BY12 1400 aa30.52■■■□□ 2.48
SEC22A-209ENST00000491366 ITSN2Q9NZM3 1697 aa30.52■■■□□ 2.48
SEC22A-209ENST00000491366 FRMPD1Q5SYB0 1578 aa30.47■■■□□ 2.47
SEC22A-209ENST00000491366 SAMD9LQ8IVG5 1584 aa30.46■■■□□ 2.47
SEC22A-209ENST00000491366 ABCC1P33527 1531 aa30.45■■■□□ 2.47
SEC22A-209ENST00000491366 POGZQ7Z3K3 1410 aa30.44■■■□□ 2.46
SEC22A-209ENST00000491366 RICTORQ6R327 1708 aa30.43■■■□□ 2.46
SEC22A-209ENST00000491366 PPARGC1BQ86YN6 1023 aaKnown RBP30.43■■■□□ 2.46
SEC22A-209ENST00000491366 ZNF644Q9H582 1327 aaPredicted RBP30.41■■■□□ 2.46
SEC22A-209ENST00000491366 ARHGEF12Q9NZN5 1544 aa30.4■■■□□ 2.46
SEC22A-209ENST00000491366 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.46
SEC22A-209ENST00000491366 SYCP2Q9BX26 1530 aa30.38■■■□□ 2.45
SEC22A-209ENST00000491366 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
SEC22A-209ENST00000491366 HNRNPMP52272 730 aaKnown RBP eCLIP30.36■■■□□ 2.45
SEC22A-209ENST00000491366 AFAP1Q8N556 730 aa30.36■■■□□ 2.45
SEC22A-209ENST00000491366 TRAPPC8Q9Y2L5 1435 aa30.36■■■□□ 2.45
SEC22A-209ENST00000491366 ZNF518AQ6AHZ1 1483 aa30.36■■■□□ 2.45
SEC22A-209ENST00000491366 CAMSAP2Q08AD1 1489 aa30.34■■■□□ 2.45
SEC22A-209ENST00000491366 ZMYM4Q5VZL5 1548 aa30.32■■■□□ 2.44
SEC22A-209ENST00000491366 KIAA1107Q9UPP5 1409 aa30.32■■■□□ 2.44
SEC22A-209ENST00000491366 MIA2Q96PC5 1412 aa30.3■■■□□ 2.44
SEC22A-209ENST00000491366 MYT1LQ9UL68 1186 aa30.29■■■□□ 2.44
SEC22A-209ENST00000491366 KDM5CP41229 1560 aa30.28■■■□□ 2.44
SEC22A-209ENST00000491366 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
SEC22A-209ENST00000491366 FGD6Q6ZV73 1430 aa30.25■■■□□ 2.43
SEC22A-209ENST00000491366 YEATS2Q9ULM3 1422 aa30.25■■■□□ 2.43
SEC22A-209ENST00000491366 ARHGEF40Q8TER5 1519 aa30.25■■■□□ 2.43
SEC22A-209ENST00000491366 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
SEC22A-209ENST00000491366 MBD5Q9P267 1494 aa30.24■■■□□ 2.43
SEC22A-209ENST00000491366 HECW2Q9P2P5 1572 aa30.24■■■□□ 2.43
SEC22A-209ENST00000491366 PTPN23Q9H3S7 1636 aa30.22■■■□□ 2.43
SEC22A-209ENST00000491366 SPAG9O60271 1321 aaKnown RBP30.2■■■□□ 2.42
SEC22A-209ENST00000491366 MLH3Q9UHC1 1453 aa30.19■■■□□ 2.42
SEC22A-209ENST00000491366 CCDC141Q6ZP82 1450 aa30.18■■■□□ 2.42
SEC22A-209ENST00000491366 ARHGEF5Q12774 1597 aa30.15■■■□□ 2.42
SEC22A-209ENST00000491366 TCOF1Q13428 1488 aaKnown RBP30.14■■■□□ 2.42
SEC22A-209ENST00000491366 RSPH4AQ5TD94 716 aa30.13■■■□□ 2.41
SEC22A-209ENST00000491366 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
SEC22A-209ENST00000491366 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
SEC22A-209ENST00000491366 ABCA6Q8N139 1617 aa30.12■■■□□ 2.41
SEC22A-209ENST00000491366 FAM50AQ14320 339 aaKnown RBP30.12■■■□□ 2.41
SEC22A-209ENST00000491366 ATP10AO60312 1499 aa30.12■■■□□ 2.41
SEC22A-209ENST00000491366 INO80Q9ULG1 1556 aaPredicted RBP30.11■■■□□ 2.41
SEC22A-209ENST00000491366 DIP2CQ9Y2E4 1556 aa30.11■■■□□ 2.41
SEC22A-209ENST00000491366 ARID4BQ4LE39 1312 aaPredicted RBP30.11■■■□□ 2.41
SEC22A-209ENST00000491366 C9orf84Q5VXU9 1444 aa30.08■■■□□ 2.41
SEC22A-209ENST00000491366 TSPY4P0CV99 314 aa30.07■■■□□ 2.4
SEC22A-209ENST00000491366 TSPY10P0CW01 314 aa30.07■■■□□ 2.4
SEC22A-209ENST00000491366 RTEL1-TNFRSF6BF6WH68 1400 aa30.04■■■□□ 2.4
SEC22A-209ENST00000491366 SIGLEC1Q9BZZ2 1709 aa30.03■■■□□ 2.4
SEC22A-209ENST00000491366 ABCC5O15440 1437 aa30.03■■■□□ 2.4
SEC22A-209ENST00000491366 DNMT1P26358 1616 aaKnown RBP30.02■■■□□ 2.4
SEC22A-209ENST00000491366 DAPK1P53355 1430 aa30.02■■■□□ 2.4
SEC22A-209ENST00000491366 MAST1Q9Y2H9 1570 aa29.98■■■□□ 2.39
SEC22A-209ENST00000491366 CROCC2H7BZ55 1655 aa29.98■■■□□ 2.39
SEC22A-209ENST00000491366 REREQ9P2R6 1566 aa29.97■■■□□ 2.39
SEC22A-209ENST00000491366 KDM4FA0A1W2PPD8 638 aa29.96■■■□□ 2.39
SEC22A-209ENST00000491366 A2MP01023 1474 aa29.95■■■□□ 2.39
SEC22A-209ENST00000491366 SHANK2Q9UPX8 1470 aa29.95■■■□□ 2.39
SEC22A-209ENST00000491366 MLECQ14165 292 aa29.95■■■□□ 2.39
SEC22A-209ENST00000491366 ADGBQ8N7X0 1667 aa29.94■■■□□ 2.38
SEC22A-209ENST00000491366 CHIC2Q9UKJ5 165 aa29.93■■■□□ 2.38
SEC22A-209ENST00000491366 BCORL1Q5H9F3 1711 aa29.92■■■□□ 2.38
SEC22A-209ENST00000491366 RRBP1Q9P2E9 1410 aaKnown RBP29.92■■■□□ 2.38
SEC22A-209ENST00000491366 ITGAEP38570 1179 aa29.9■■■□□ 2.38
SEC22A-209ENST00000491366 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
SEC22A-209ENST00000491366 AGLP35573 1532 aa29.88■■■□□ 2.37
SEC22A-209ENST00000491366 DHX29Q7Z478 1369 aaKnown RBP29.87■■■□□ 2.37
SEC22A-209ENST00000491366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.87■■■□□ 2.37
SEC22A-209ENST00000491366 RRP7BPQ9NSQ0 103 aa29.85■■■□□ 2.37
SEC22A-209ENST00000491366 ADAMTSL3P82987 1691 aa29.85■■■□□ 2.37
SEC22A-209ENST00000491366 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
SEC22A-209ENST00000491366 KIF15Q9NS87 1388 aa29.83■■■□□ 2.37
SEC22A-209ENST00000491366 MADDQ8WXG6 1647 aa29.82■■■□□ 2.36
SEC22A-209ENST00000491366 ANKRD30AQ9BXX3 1397 aa29.82■■■□□ 2.36
SEC22A-209ENST00000491366 DUOX2Q9NRD8 1548 aa29.78■■■□□ 2.36
SEC22A-209ENST00000491366 ADGRL2O95490 1459 aa29.78■■■□□ 2.36
SEC22A-209ENST00000491366 NCOA1Q15788 1441 aa29.78■■■□□ 2.36
SEC22A-209ENST00000491366 KIF3BO15066 747 aa29.77■■■□□ 2.36
SEC22A-209ENST00000491366 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
SEC22A-209ENST00000491366 GGT6Q6P531 493 aa29.76■■■□□ 2.35
SEC22A-209ENST00000491366 RIMS1Q86UR5 1692 aaKnown RBP29.75■■■□□ 2.35
SEC22A-209ENST00000491366 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
SEC22A-209ENST00000491366 ESF1Q9H501 851 aaKnown RBP29.71■■■□□ 2.35
SEC22A-209ENST00000491366 PTPRMP28827 1452 aa29.69■■■□□ 2.34
SEC22A-209ENST00000491366 PLPPR3Q6T4P5 718 aa29.69■■■□□ 2.34
SEC22A-209ENST00000491366 ERBINQ96RT1 1412 aa29.69■■■□□ 2.34
SEC22A-209ENST00000491366 ROCK1Q13464 1354 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms