RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 MIA2Q96PC5 1412 aa13.74□□□□□ -0.21
PGK1-205ENST00000491291 FAM69CQ0P6D2 419 aa13.74□□□□□ -0.21
PGK1-205ENST00000491291 CFAP74Q9C0B2 1584 aa13.74□□□□□ -0.21
PGK1-205ENST00000491291 PLCH2O75038 1416 aa13.73□□□□□ -0.21
PGK1-205ENST00000491291 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
PGK1-205ENST00000491291 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
PGK1-205ENST00000491291 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
PGK1-205ENST00000491291 PPRC1Q5VV67 1664 aaKnown RBP13.71□□□□□ -0.21
PGK1-205ENST00000491291 SAMD9LQ8IVG5 1584 aa13.71□□□□□ -0.22
PGK1-205ENST00000491291 CAMSAP2Q08AD1 1489 aa13.7□□□□□ -0.22
PGK1-205ENST00000491291 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
PGK1-205ENST00000491291 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
PGK1-205ENST00000491291 FANCAO15360 1455 aa13.68□□□□□ -0.22
PGK1-205ENST00000491291 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
PGK1-205ENST00000491291 FAM50AQ14320 339 aaKnown RBP13.68□□□□□ -0.22
PGK1-205ENST00000491291 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
PGK1-205ENST00000491291 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
PGK1-205ENST00000491291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.67□□□□□ -0.224e-13■■■■■ 30.7
PGK1-205ENST00000491291 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
PGK1-205ENST00000491291 ABCC1P33527 1531 aa13.66□□□□□ -0.22
PGK1-205ENST00000491291 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
PGK1-205ENST00000491291 NEO1Q92859 1461 aa13.65□□□□□ -0.22
PGK1-205ENST00000491291 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
PGK1-205ENST00000491291 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
PGK1-205ENST00000491291 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
PGK1-205ENST00000491291 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
PGK1-205ENST00000491291 AKNAQ7Z591 1439 aa13.64□□□□□ -0.23
PGK1-205ENST00000491291 ARHGEF5Q12774 1597 aa13.63□□□□□ -0.23
PGK1-205ENST00000491291 ADGRL1O94910 1474 aa13.63□□□□□ -0.23
PGK1-205ENST00000491291 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
PGK1-205ENST00000491291 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
PGK1-205ENST00000491291 DAPK1P53355 1430 aa13.6□□□□□ -0.23
PGK1-205ENST00000491291 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
PGK1-205ENST00000491291 SCAPERQ9BY12 1400 aa13.59□□□□□ -0.23
PGK1-205ENST00000491291 ITGAEP38570 1179 aa13.59□□□□□ -0.23
PGK1-205ENST00000491291 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.232e-12■■■□□ 18.3
PGK1-205ENST00000491291 CCDC141Q6ZP82 1450 aa13.59□□□□□ -0.23
PGK1-205ENST00000491291 MBD5Q9P267 1494 aa13.59□□□□□ -0.23
PGK1-205ENST00000491291 RICTORQ6R327 1708 aa13.58□□□□□ -0.24
PGK1-205ENST00000491291 ABCC5O15440 1437 aa13.57□□□□□ -0.24
PGK1-205ENST00000491291 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
PGK1-205ENST00000491291 DENND4BO75064 1496 aaPredicted RBP13.56□□□□□ -0.24
PGK1-205ENST00000491291 SHANK2Q9UPX8 1470 aa13.56□□□□□ -0.24
PGK1-205ENST00000491291 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
PGK1-205ENST00000491291 MAST1Q9Y2H9 1570 aa13.55□□□□□ -0.24
PGK1-205ENST00000491291 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
PGK1-205ENST00000491291 POGZQ7Z3K3 1410 aa13.55□□□□□ -0.24
PGK1-205ENST00000491291 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
PGK1-205ENST00000491291 TSPY4P0CV99 314 aa13.54□□□□□ -0.24
PGK1-205ENST00000491291 TSPY10P0CW01 314 aa13.54□□□□□ -0.24
PGK1-205ENST00000491291 PTPRKQ15262 1439 aa13.54□□□□□ -0.24
PGK1-205ENST00000491291 KDM5CP41229 1560 aa13.54□□□□□ -0.24
PGK1-205ENST00000491291 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
PGK1-205ENST00000491291 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
PGK1-205ENST00000491291 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
PGK1-205ENST00000491291 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
PGK1-205ENST00000491291 INO80Q9ULG1 1556 aaPredicted RBP13.52□□□□□ -0.25
PGK1-205ENST00000491291 KDM6BO15054 1643 aa13.52□□□□□ -0.25
PGK1-205ENST00000491291 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
PGK1-205ENST00000491291 ADGRL2O95490 1459 aa13.51□□□□□ -0.25
PGK1-205ENST00000491291 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
PGK1-205ENST00000491291 KIDINS220Q9ULH0 1771 aa13.5□□□□□ -0.25
PGK1-205ENST00000491291 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
PGK1-205ENST00000491291 ATP7AQ04656 1500 aa13.5□□□□□ -0.25
PGK1-205ENST00000491291 ZFYVE16Q7Z3T8 1539 aa13.5□□□□□ -0.25
PGK1-205ENST00000491291 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
PGK1-205ENST00000491291 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
PGK1-205ENST00000491291 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
PGK1-205ENST00000491291 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
PGK1-205ENST00000491291 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
PGK1-205ENST00000491291 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
PGK1-205ENST00000491291 RTEL1-TNFRSF6BF6WH68 1400 aa13.48□□□□□ -0.25
PGK1-205ENST00000491291 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
PGK1-205ENST00000491291 MLH3Q9UHC1 1453 aa13.47□□□□□ -0.25
PGK1-205ENST00000491291 ABCA6Q8N139 1617 aa13.46□□□□□ -0.25
PGK1-205ENST00000491291 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
PGK1-205ENST00000491291 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
PGK1-205ENST00000491291 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
PGK1-205ENST00000491291 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
PGK1-205ENST00000491291 NAIPQ13075 1403 aa13.44□□□□□ -0.26
PGK1-205ENST00000491291 DIP2CQ9Y2E4 1556 aa13.44□□□□□ -0.26
PGK1-205ENST00000491291 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
PGK1-205ENST00000491291 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
PGK1-205ENST00000491291 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
PGK1-205ENST00000491291 ARHGEF40Q8TER5 1519 aa13.43□□□□□ -0.26
PGK1-205ENST00000491291 YEATS2Q9ULM3 1422 aa13.4□□□□□ -0.26
PGK1-205ENST00000491291 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
PGK1-205ENST00000491291 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
PGK1-205ENST00000491291 RAB3GAP2Q9H2M9 1393 aa13.39□□□□□ -0.27
PGK1-205ENST00000491291 A2MP01023 1474 aa13.39□□□□□ -0.27
PGK1-205ENST00000491291 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
PGK1-205ENST00000491291 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
PGK1-205ENST00000491291 ATP10AO60312 1499 aa13.37□□□□□ -0.27
PGK1-205ENST00000491291 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
PGK1-205ENST00000491291 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
PGK1-205ENST00000491291 UNC13BO14795 1591 aa13.34□□□□□ -0.27
PGK1-205ENST00000491291 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
PGK1-205ENST00000491291 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.27
PGK1-205ENST00000491291 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.28
PGK1-205ENST00000491291 HRCP23327 699 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms