RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
FDPS-216ENST00000491013 KDM4FA0A1W2PPD8 638 aa23.43■■□□□ 1.34
FDPS-216ENST00000491013 VPS8Q8N3P4 1428 aa23.42■■□□□ 1.34
FDPS-216ENST00000491013 SCAPERQ9BY12 1400 aa23.41■■□□□ 1.34
FDPS-216ENST00000491013 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
FDPS-216ENST00000491013 ZMYM4Q5VZL5 1548 aa23.39■■□□□ 1.34
FDPS-216ENST00000491013 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
FDPS-216ENST00000491013 POGZQ7Z3K3 1410 aa23.37■■□□□ 1.33
FDPS-216ENST00000491013 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
FDPS-216ENST00000491013 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
FDPS-216ENST00000491013 GPATCH8Q9UKJ3 1502 aaKnown RBP23.34■■□□□ 1.33
FDPS-216ENST00000491013 MAGI2Q86UL8 1455 aa23.33■■□□□ 1.33
FDPS-216ENST00000491013 ABCC1P33527 1531 aa23.31■■□□□ 1.32
FDPS-216ENST00000491013 ITSN2Q9NZM3 1697 aa23.31■■□□□ 1.32
FDPS-216ENST00000491013 ZFYVE16Q7Z3T8 1539 aa23.3■■□□□ 1.32
FDPS-216ENST00000491013 ZNF518AQ6AHZ1 1483 aa23.3■■□□□ 1.32
FDPS-216ENST00000491013 CCNB3Q8WWL7 1395 aa23.29■■□□□ 1.32
FDPS-216ENST00000491013 KDM5CP41229 1560 aa23.29■■□□□ 1.32
FDPS-216ENST00000491013 SUPT6HQ7KZ85 1726 aaKnown RBP23.29■■□□□ 1.32
FDPS-216ENST00000491013 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
FDPS-216ENST00000491013 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
FDPS-216ENST00000491013 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
FDPS-216ENST00000491013 YEATS2Q9ULM3 1422 aa23.26■■□□□ 1.31
FDPS-216ENST00000491013 AFAP1Q8N556 730 aa23.25■■□□□ 1.31
FDPS-216ENST00000491013 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
FDPS-216ENST00000491013 LRRC9Q6ZRR7 1453 aa23.24■■□□□ 1.31
FDPS-216ENST00000491013 BCORL1Q5H9F3 1711 aa23.23■■□□□ 1.31
FDPS-216ENST00000491013 TRAPPC8Q9Y2L5 1435 aa23.23■■□□□ 1.31
FDPS-216ENST00000491013 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
FDPS-216ENST00000491013 ADAMTSL3P82987 1691 aa23.22■■□□□ 1.31
FDPS-216ENST00000491013 SIGLEC1Q9BZZ2 1709 aa23.22■■□□□ 1.31
FDPS-216ENST00000491013 ZNF777Q9ULD5 760 aaPredicted RBP23.22■■□□□ 1.31
FDPS-216ENST00000491013 NCOA2Q15596 1464 aa23.22■■□□□ 1.31
FDPS-216ENST00000491013 PLEKHH2Q8IVE3 1493 aa23.2■■□□□ 1.3
FDPS-216ENST00000491013 MLH3Q9UHC1 1453 aa23.2■■□□□ 1.3
FDPS-216ENST00000491013 SYCP2Q9BX26 1530 aa23.19■■□□□ 1.3
FDPS-216ENST00000491013 ATP10AO60312 1499 aa23.19■■□□□ 1.3
FDPS-216ENST00000491013 KIAA1107Q9UPP5 1409 aa23.19■■□□□ 1.3
FDPS-216ENST00000491013 ARID4BQ4LE39 1312 aaPredicted RBP23.18■■□□□ 1.3
FDPS-216ENST00000491013 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
FDPS-216ENST00000491013 KANK4Q5T7N3 995 aaPredicted RBP23.16■■□□□ 1.3
FDPS-216ENST00000491013 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
FDPS-216ENST00000491013 DIP2CQ9Y2E4 1556 aa23.15■■□□□ 1.3
FDPS-216ENST00000491013 ABCA6Q8N139 1617 aa23.15■■□□□ 1.3
FDPS-216ENST00000491013 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.29
FDPS-216ENST00000491013 APLP2Q06481 763 aa23.12■■□□□ 1.29
FDPS-216ENST00000491013 REREQ9P2R6 1566 aa23.12■■□□□ 1.29
FDPS-216ENST00000491013 MYT1LQ9UL68 1186 aa23.12■■□□□ 1.29
FDPS-216ENST00000491013 MADDQ8WXG6 1647 aa23.11■■□□□ 1.29
FDPS-216ENST00000491013 ZNF644Q9H582 1327 aaPredicted RBP23.11■■□□□ 1.29
FDPS-216ENST00000491013 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
FDPS-216ENST00000491013 INO80Q9ULG1 1556 aaPredicted RBP23.07■■□□□ 1.28
FDPS-216ENST00000491013 SPAG9O60271 1321 aaKnown RBP23.07■■□□□ 1.28
FDPS-216ENST00000491013 PTPRMP28827 1452 aa23.06■■□□□ 1.28
FDPS-216ENST00000491013 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
FDPS-216ENST00000491013 ATP7AQ04656 1500 aa23.06■■□□□ 1.28
FDPS-216ENST00000491013 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
FDPS-216ENST00000491013 FER1L4A9Z1Z3 1794 aa23.05■■□□□ 1.28
FDPS-216ENST00000491013 AGLP35573 1532 aa23.03■■□□□ 1.28
FDPS-216ENST00000491013 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
FDPS-216ENST00000491013 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
FDPS-216ENST00000491013 MLECQ14165 292 aa23.01■■□□□ 1.27
FDPS-216ENST00000491013 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
FDPS-216ENST00000491013 ARHGEF5Q12774 1597 aa23■■□□□ 1.27
FDPS-216ENST00000491013 CCDC141Q6ZP82 1450 aa22.99■■□□□ 1.27
FDPS-216ENST00000491013 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
FDPS-216ENST00000491013 RTEL1-TNFRSF6BF6WH68 1400 aa22.98■■□□□ 1.27
FDPS-216ENST00000491013 PLXNC1O60486 1568 aa22.95■■□□□ 1.26
FDPS-216ENST00000491013 A2MP01023 1474 aa22.93■■□□□ 1.26
FDPS-216ENST00000491013 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
FDPS-216ENST00000491013 MAST1Q9Y2H9 1570 aa22.89■■□□□ 1.25
FDPS-216ENST00000491013 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
FDPS-216ENST00000491013 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
FDPS-216ENST00000491013 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
FDPS-216ENST00000491013 DHX29Q7Z478 1369 aaKnown RBP22.86■■□□□ 1.25
FDPS-216ENST00000491013 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
FDPS-216ENST00000491013 SETD1BQ9UPS6 1966 aaKnown RBP22.84■■□□□ 1.25
FDPS-216ENST00000491013 CROCC2H7BZ55 1655 aa22.83■■□□□ 1.24
FDPS-216ENST00000491013 C3P01024 1663 aa22.83■■□□□ 1.24
FDPS-216ENST00000491013 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
FDPS-216ENST00000491013 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
FDPS-216ENST00000491013 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
FDPS-216ENST00000491013 ESF1Q9H501 851 aaKnown RBP22.81■■□□□ 1.24
FDPS-216ENST00000491013 DNMT1P26358 1616 aaKnown RBP22.8■■□□□ 1.24
FDPS-216ENST00000491013 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
FDPS-216ENST00000491013 ABCC5O15440 1437 aa22.79■■□□□ 1.24
FDPS-216ENST00000491013 CLTCQ00610 1675 aaKnown RBP22.78■■□□□ 1.24
FDPS-216ENST00000491013 LMTK3Q96Q04 1460 aa22.78■■□□□ 1.24
FDPS-216ENST00000491013 SHANK2Q9UPX8 1470 aa22.78■■□□□ 1.24
FDPS-216ENST00000491013 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
FDPS-216ENST00000491013 GGT6Q6P531 493 aa22.76■■□□□ 1.23
FDPS-216ENST00000491013 PREX1Q8TCU6 1659 aa22.76■■□□□ 1.23
FDPS-216ENST00000491013 DAPK1P53355 1430 aa22.75■■□□□ 1.23
FDPS-216ENST00000491013 KIF3BO15066 747 aa22.73■■□□□ 1.23
FDPS-216ENST00000491013 EIF2AK4Q9P2K8 1649 aaKnown RBP22.72■■□□□ 1.23
FDPS-216ENST00000491013 ZMYM3Q14202 1370 aa22.72■■□□□ 1.23
FDPS-216ENST00000491013 DUOX2Q9NRD8 1548 aa22.71■■□□□ 1.23
FDPS-216ENST00000491013 RNF17Q9BXT8 1623 aaKnown RBP22.69■■□□□ 1.22
FDPS-216ENST00000491013 FAM135AQ9P2D6 1515 aa22.69■■□□□ 1.22
FDPS-216ENST00000491013 KIF15Q9NS87 1388 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms