RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
LINC02049-201ENST00000490647 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
LINC02049-201ENST00000490647 NCKAP5LQ9HCH0 1330 aa12.01□□□□□ -0.49
LINC02049-201ENST00000490647 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
LINC02049-201ENST00000490647 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
LINC02049-201ENST00000490647 C2orf72A6NCS6 295 aa11.97□□□□□ -0.49
LINC02049-201ENST00000490647 KIF3CO14782 793 aa11.96□□□□□ -0.49
LINC02049-201ENST00000490647 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
LINC02049-201ENST00000490647 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
LINC02049-201ENST00000490647 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
LINC02049-201ENST00000490647 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
LINC02049-201ENST00000490647 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
LINC02049-201ENST00000490647 DSG2Q14126 1118 aa11.9□□□□□ -0.5
LINC02049-201ENST00000490647 TMC2Q8TDI7 906 aa11.9□□□□□ -0.5
LINC02049-201ENST00000490647 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
LINC02049-201ENST00000490647 PDE4AP27815 886 aa11.87□□□□□ -0.51
LINC02049-201ENST00000490647 MFSD10Q14728 455 aa11.86□□□□□ -0.51
LINC02049-201ENST00000490647 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
LINC02049-201ENST00000490647 FOXK1P85037 733 aa11.84□□□□□ -0.51
LINC02049-201ENST00000490647 PPP1R15BQ5SWA1 713 aa11.84□□□□□ -0.51
LINC02049-201ENST00000490647 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
LINC02049-201ENST00000490647 PLPP6Q8IY26 295 aa11.83□□□□□ -0.52
LINC02049-201ENST00000490647 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
LINC02049-201ENST00000490647 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
LINC02049-201ENST00000490647 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
LINC02049-201ENST00000490647 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
LINC02049-201ENST00000490647 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
LINC02049-201ENST00000490647 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
LINC02049-201ENST00000490647 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
LINC02049-201ENST00000490647 CAMK2BQ13554 666 aa11.71□□□□□ -0.53
LINC02049-201ENST00000490647 UPF1Q92900 1129 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC02049-201ENST00000490647 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC02049-201ENST00000490647 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
LINC02049-201ENST00000490647 E2F4Q16254 413 aa11.69□□□□□ -0.54
LINC02049-201ENST00000490647 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
LINC02049-201ENST00000490647 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
LINC02049-201ENST00000490647 ST18O60284 1047 aa11.66□□□□□ -0.54
LINC02049-201ENST00000490647 SLC34A2O95436 690 aa11.66□□□□□ -0.54
LINC02049-201ENST00000490647 ARSIQ5FYB1 569 aa11.66□□□□□ -0.54
LINC02049-201ENST00000490647 SNPHO15079 494 aa11.65□□□□□ -0.54
LINC02049-201ENST00000490647 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
LINC02049-201ENST00000490647 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
LINC02049-201ENST00000490647 PCDHGA4Q9Y5G9 962 aa11.65□□□□□ -0.54
LINC02049-201ENST00000490647 DPYSL4O14531 572 aa11.64□□□□□ -0.55
LINC02049-201ENST00000490647 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
LINC02049-201ENST00000490647 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
LINC02049-201ENST00000490647 NUDT7P0C024 238 aa11.59□□□□□ -0.55
LINC02049-201ENST00000490647 MARVELD3Q96A59 401 aa11.59□□□□□ -0.55
LINC02049-201ENST00000490647 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
LINC02049-201ENST00000490647 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
LINC02049-201ENST00000490647 CDAN1Q8IWY9 1227 aa11.57□□□□□ -0.56
LINC02049-201ENST00000490647 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
LINC02049-201ENST00000490647 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
LINC02049-201ENST00000490647 ARIH1Q9Y4X5 557 aaPredicted RBP11.55□□□□□ -0.56
LINC02049-201ENST00000490647 EVI5O60447 810 aa11.54□□□□□ -0.56
LINC02049-201ENST00000490647 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
LINC02049-201ENST00000490647 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
LINC02049-201ENST00000490647 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
LINC02049-201ENST00000490647 TBC1D12O60347 775 aa11.51□□□□□ -0.57
LINC02049-201ENST00000490647 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
LINC02049-201ENST00000490647 PDIA6Q15084 440 aa11.5□□□□□ -0.57
LINC02049-201ENST00000490647 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
LINC02049-201ENST00000490647 EMP3P54852 163 aa11.48□□□□□ -0.57
LINC02049-201ENST00000490647 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
LINC02049-201ENST00000490647 SEMA3EO15041 775 aa11.47□□□□□ -0.57
LINC02049-201ENST00000490647 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
LINC02049-201ENST00000490647 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
LINC02049-201ENST00000490647 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
LINC02049-201ENST00000490647 DDX12PQ92771 950 aa11.44□□□□□ -0.58
LINC02049-201ENST00000490647 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
LINC02049-201ENST00000490647 ERBB3P21860 1342 aa11.42□□□□□ -0.58
LINC02049-201ENST00000490647 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
LINC02049-201ENST00000490647 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
LINC02049-201ENST00000490647 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
LINC02049-201ENST00000490647 GRXCR2A6NFK2 248 aa11.39□□□□□ -0.59
LINC02049-201ENST00000490647 PTGER2P43116 358 aa11.39□□□□□ -0.59
LINC02049-201ENST00000490647 FOSBP53539 338 aa11.39□□□□□ -0.59
LINC02049-201ENST00000490647 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
LINC02049-201ENST00000490647 PCDHGA10Q9Y5H3 936 aa11.39□□□□□ -0.59
LINC02049-201ENST00000490647 TESPA1A2RU30 521 aaPredicted RBP11.37□□□□□ -0.59
LINC02049-201ENST00000490647 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
LINC02049-201ENST00000490647 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
LINC02049-201ENST00000490647 NBR1Q14596 966 aa11.34□□□□□ -0.59
LINC02049-201ENST00000490647 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
LINC02049-201ENST00000490647 PHF14O94880 888 aa11.33□□□□□ -0.6
LINC02049-201ENST00000490647 OSBPP22059 807 aa11.33□□□□□ -0.6
LINC02049-201ENST00000490647 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
LINC02049-201ENST00000490647 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
LINC02049-201ENST00000490647 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
LINC02049-201ENST00000490647 TYW1BQ6NUM6 668 aa11.3□□□□□ -0.6
LINC02049-201ENST00000490647 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
LINC02049-201ENST00000490647 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
LINC02049-201ENST00000490647 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
LINC02049-201ENST00000490647 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
LINC02049-201ENST00000490647 RBM26Q5T8P6 1007 aaKnown RBP11.28□□□□□ -0.6
LINC02049-201ENST00000490647 ZNF687Q8N1G0 1237 aa11.28□□□□□ -0.6
LINC02049-201ENST00000490647 EPAS1Q99814 870 aa11.28□□□□□ -0.6
LINC02049-201ENST00000490647 PSEN2P49810 448 aa11.27□□□□□ -0.61
LINC02049-201ENST00000490647 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
LINC02049-201ENST00000490647 PSDA5PKW4 1024 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms