RNA–Protein interactions for RNA: ENST00000490205.1

NELFCD-210, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-210ENST00000490205 EMP3P54852 163 aa10.67□□□□□ -0.7
NELFCD-210ENST00000490205 PPP1R37O75864 691 aa10.64□□□□□ -0.71
NELFCD-210ENST00000490205 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
NELFCD-210ENST00000490205 HOXB1P14653 301 aaPredicted RBP10.62□□□□□ -0.71
NELFCD-210ENST00000490205 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
NELFCD-210ENST00000490205 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
NELFCD-210ENST00000490205 FAM205CA6NFA0 338 aa10.6□□□□□ -0.71
NELFCD-210ENST00000490205 KIF3CO14782 793 aa10.6□□□□□ -0.71
NELFCD-210ENST00000490205 RYDENQ9NUL5 291 aaKnown RBP10.6□□□□□ -0.71
NELFCD-210ENST00000490205 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
NELFCD-210ENST00000490205 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
NELFCD-210ENST00000490205 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
NELFCD-210ENST00000490205 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
NELFCD-210ENST00000490205 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
NELFCD-210ENST00000490205 ERBB3P21860 1342 aa10.54□□□□□ -0.72
NELFCD-210ENST00000490205 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
NELFCD-210ENST00000490205 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
NELFCD-210ENST00000490205 ARSIQ5FYB1 569 aa10.51□□□□□ -0.73
NELFCD-210ENST00000490205 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
NELFCD-210ENST00000490205 SLC34A2O95436 690 aa10.47□□□□□ -0.73
NELFCD-210ENST00000490205 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
NELFCD-210ENST00000490205 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
NELFCD-210ENST00000490205 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
NELFCD-210ENST00000490205 FOXK1P85037 733 aa10.45□□□□□ -0.74
NELFCD-210ENST00000490205 KHSRPQ92945 711 aaKnown RBP eCLIP10.45□□□□□ -0.741e-8■■■□□ 15.3
NELFCD-210ENST00000490205 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
NELFCD-210ENST00000490205 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
NELFCD-210ENST00000490205 PLPP6Q8IY26 295 aa10.43□□□□□ -0.74
NELFCD-210ENST00000490205 PCDHGA4Q9Y5G9 962 aa10.43□□□□□ -0.74
NELFCD-210ENST00000490205 SPNS2Q8IVW8 549 aa10.42□□□□□ -0.74
NELFCD-210ENST00000490205 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
NELFCD-210ENST00000490205 NUDT7P0C024 238 aa10.41□□□□□ -0.74
NELFCD-210ENST00000490205 DSG2Q14126 1118 aa10.41□□□□□ -0.74
NELFCD-210ENST00000490205 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
NELFCD-210ENST00000490205 PDE4AP27815 886 aa10.38□□□□□ -0.75
NELFCD-210ENST00000490205 PTCD2Q8WV60 388 aaKnown RBP10.38□□□□□ -0.75
NELFCD-210ENST00000490205 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
NELFCD-210ENST00000490205 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
NELFCD-210ENST00000490205 TBC1D12O60347 775 aa10.36□□□□□ -0.75
NELFCD-210ENST00000490205 MMRN1Q13201 1228 aa10.35□□□□□ -0.75
NELFCD-210ENST00000490205 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
NELFCD-210ENST00000490205 LHX6Q9UPM6 363 aa10.35□□□□□ -0.75
NELFCD-210ENST00000490205 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
NELFCD-210ENST00000490205 PPP1R15BQ5SWA1 713 aa10.33□□□□□ -0.76
NELFCD-210ENST00000490205 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
NELFCD-210ENST00000490205 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
NELFCD-210ENST00000490205 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
NELFCD-210ENST00000490205 DDX27Q96GQ7 796 aaKnown RBP10.29□□□□□ -0.76
NELFCD-210ENST00000490205 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
NELFCD-210ENST00000490205 UPF1Q92900 1129 aaKnown RBP eCLIP10.27□□□□□ -0.77
NELFCD-210ENST00000490205 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
NELFCD-210ENST00000490205 PBX2P40425 430 aa10.26□□□□□ -0.77
NELFCD-210ENST00000490205 MFSD10Q14728 455 aa10.25□□□□□ -0.77
NELFCD-210ENST00000490205 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
NELFCD-210ENST00000490205 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
NELFCD-210ENST00000490205 SPRYD3Q8NCJ5 442 aa10.24□□□□□ -0.77
NELFCD-210ENST00000490205 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
NELFCD-210ENST00000490205 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
NELFCD-210ENST00000490205 ARHGAP33O14559 1287 aa10.2□□□□□ -0.78
NELFCD-210ENST00000490205 PTGER2P43116 358 aa10.2□□□□□ -0.78
NELFCD-210ENST00000490205 POTEEQ6S8J3 1075 aa10.2□□□□□ -0.78
NELFCD-210ENST00000490205 AXIN2Q9Y2T1 843 aa10.2□□□□□ -0.78
NELFCD-210ENST00000490205 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
NELFCD-210ENST00000490205 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
NELFCD-210ENST00000490205 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
NELFCD-210ENST00000490205 EVI5O60447 810 aa10.16□□□□□ -0.78
NELFCD-210ENST00000490205 PAXIP1Q6ZW49 1069 aaPredicted RBP10.16□□□□□ -0.78
NELFCD-210ENST00000490205 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
NELFCD-210ENST00000490205 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
NELFCD-210ENST00000490205 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
NELFCD-210ENST00000490205 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
NELFCD-210ENST00000490205 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
NELFCD-210ENST00000490205 PSEN2P49810 448 aa10.12□□□□□ -0.79
NELFCD-210ENST00000490205 FOSBP53539 338 aa10.11□□□□□ -0.79
NELFCD-210ENST00000490205 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
NELFCD-210ENST00000490205 CAMK2BQ13554 666 aa10.1□□□□□ -0.79
NELFCD-210ENST00000490205 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
NELFCD-210ENST00000490205 TK2O00142 265 aa10.09□□□□□ -0.79
NELFCD-210ENST00000490205 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
NELFCD-210ENST00000490205 KCNK17Q96T54 332 aa10.09□□□□□ -0.79
NELFCD-210ENST00000490205 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
NELFCD-210ENST00000490205 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
NELFCD-210ENST00000490205 PTPREP23469 700 aa10.05□□□□□ -0.8
NELFCD-210ENST00000490205 DPYSL4O14531 572 aa10.04□□□□□ -0.8
NELFCD-210ENST00000490205 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
NELFCD-210ENST00000490205 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
NELFCD-210ENST00000490205 HRO43593 1189 aa10.02□□□□□ -0.81
NELFCD-210ENST00000490205 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
NELFCD-210ENST00000490205 PHF14O94880 888 aa10.01□□□□□ -0.81
NELFCD-210ENST00000490205 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
NELFCD-210ENST00000490205 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
NELFCD-210ENST00000490205 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
NELFCD-210ENST00000490205 E2F4Q16254 413 aa9.99□□□□□ -0.81
NELFCD-210ENST00000490205 TYW1BQ6NUM6 668 aa9.99□□□□□ -0.81
NELFCD-210ENST00000490205 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
NELFCD-210ENST00000490205 EPAS1Q99814 870 aa9.97□□□□□ -0.81
NELFCD-210ENST00000490205 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.82
NELFCD-210ENST00000490205 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
NELFCD-210ENST00000490205 PPP1R3GB7ZBB8 358 aa9.94□□□□□ -0.82
NELFCD-210ENST00000490205 PDIA6Q15084 440 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms