RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 ADAMTSL3P82987 1691 aa19.16■□□□□ 0.66
SEMA6C-208ENST00000489944 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
SEMA6C-208ENST00000489944 ZFYVE16Q7Z3T8 1539 aa19.15■□□□□ 0.66
SEMA6C-208ENST00000489944 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
SEMA6C-208ENST00000489944 ARHGAP5Q13017 1502 aa19.14■□□□□ 0.65
SEMA6C-208ENST00000489944 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.65
SEMA6C-208ENST00000489944 ARID4BQ4LE39 1312 aaPredicted RBP19.11■□□□□ 0.65
SEMA6C-208ENST00000489944 PREX2Q70Z35 1606 aa19.1■□□□□ 0.65
SEMA6C-208ENST00000489944 KDM5CP41229 1560 aa19.1■□□□□ 0.65
SEMA6C-208ENST00000489944 PTPRMP28827 1452 aa19.09■□□□□ 0.65
SEMA6C-208ENST00000489944 ATP10AO60312 1499 aa19.09■□□□□ 0.65
SEMA6C-208ENST00000489944 C9orf84Q5VXU9 1444 aa19.07■□□□□ 0.64
SEMA6C-208ENST00000489944 CDC42BPBQ9Y5S2 1711 aa19.06■□□□□ 0.64
SEMA6C-208ENST00000489944 MLH3Q9UHC1 1453 aa19.06■□□□□ 0.64
SEMA6C-208ENST00000489944 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
SEMA6C-208ENST00000489944 YEATS2Q9ULM3 1422 aa19.06■□□□□ 0.64
SEMA6C-208ENST00000489944 HECW2Q9P2P5 1572 aa19.05■□□□□ 0.64
SEMA6C-208ENST00000489944 REREQ9P2R6 1566 aa19.04■□□□□ 0.64
SEMA6C-208ENST00000489944 ABCC1P33527 1531 aa19.04■□□□□ 0.64
SEMA6C-208ENST00000489944 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
SEMA6C-208ENST00000489944 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
SEMA6C-208ENST00000489944 MADDQ8WXG6 1647 aa19.02■□□□□ 0.64
SEMA6C-208ENST00000489944 CDC42BPAQ5VT25 1732 aa19.01■□□□□ 0.63
SEMA6C-208ENST00000489944 KIAA1107Q9UPP5 1409 aa19■□□□□ 0.63
SEMA6C-208ENST00000489944 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
SEMA6C-208ENST00000489944 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
SEMA6C-208ENST00000489944 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
SEMA6C-208ENST00000489944 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
SEMA6C-208ENST00000489944 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
SEMA6C-208ENST00000489944 AGLP35573 1532 aa18.97■□□□□ 0.63
SEMA6C-208ENST00000489944 ARHGEF12Q9NZN5 1544 aa18.96■□□□□ 0.63
SEMA6C-208ENST00000489944 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
SEMA6C-208ENST00000489944 DIP2CQ9Y2E4 1556 aa18.94■□□□□ 0.62
SEMA6C-208ENST00000489944 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
SEMA6C-208ENST00000489944 RIMS1Q86UR5 1692 aaKnown RBP18.94■□□□□ 0.62
SEMA6C-208ENST00000489944 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
SEMA6C-208ENST00000489944 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
SEMA6C-208ENST00000489944 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
SEMA6C-208ENST00000489944 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
SEMA6C-208ENST00000489944 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
SEMA6C-208ENST00000489944 RSPH4AQ5TD94 716 aa18.89■□□□□ 0.61
SEMA6C-208ENST00000489944 SPAG9O60271 1321 aaKnown RBP18.89■□□□□ 0.61
SEMA6C-208ENST00000489944 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
SEMA6C-208ENST00000489944 ABCA6Q8N139 1617 aa18.89■□□□□ 0.61
SEMA6C-208ENST00000489944 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
SEMA6C-208ENST00000489944 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
SEMA6C-208ENST00000489944 KIDINS220Q9ULH0 1771 aa18.88■□□□□ 0.61
SEMA6C-208ENST00000489944 LMTK3Q96Q04 1460 aa18.87■□□□□ 0.61
SEMA6C-208ENST00000489944 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
SEMA6C-208ENST00000489944 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
SEMA6C-208ENST00000489944 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
SEMA6C-208ENST00000489944 MLECQ14165 292 aa18.85■□□□□ 0.61
SEMA6C-208ENST00000489944 RTEL1-TNFRSF6BF6WH68 1400 aa18.84■□□□□ 0.61
SEMA6C-208ENST00000489944 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
SEMA6C-208ENST00000489944 ATP7AQ04656 1500 aa18.84■□□□□ 0.61
SEMA6C-208ENST00000489944 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.6
SEMA6C-208ENST00000489944 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
SEMA6C-208ENST00000489944 INO80Q9ULG1 1556 aaPredicted RBP18.82■□□□□ 0.6
SEMA6C-208ENST00000489944 SETD1BQ9UPS6 1966 aaKnown RBP18.82■□□□□ 0.6
SEMA6C-208ENST00000489944 NCOA2Q15596 1464 aa18.82■□□□□ 0.6
SEMA6C-208ENST00000489944 MBD5Q9P267 1494 aa18.8■□□□□ 0.6
SEMA6C-208ENST00000489944 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
SEMA6C-208ENST00000489944 A2MP01023 1474 aa18.78■□□□□ 0.6
SEMA6C-208ENST00000489944 PLXNC1O60486 1568 aa18.78■□□□□ 0.6
SEMA6C-208ENST00000489944 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
SEMA6C-208ENST00000489944 PREX1Q8TCU6 1659 aa18.78■□□□□ 0.6
SEMA6C-208ENST00000489944 ADGBQ8N7X0 1667 aa18.77■□□□□ 0.6
SEMA6C-208ENST00000489944 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
SEMA6C-208ENST00000489944 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
SEMA6C-208ENST00000489944 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
SEMA6C-208ENST00000489944 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
SEMA6C-208ENST00000489944 NPATQ14207 1427 aa18.74■□□□□ 0.59
SEMA6C-208ENST00000489944 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
SEMA6C-208ENST00000489944 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
SEMA6C-208ENST00000489944 CAMSAP2Q08AD1 1489 aa18.72■□□□□ 0.59
SEMA6C-208ENST00000489944 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
SEMA6C-208ENST00000489944 ZNF644Q9H582 1327 aaPredicted RBP18.72■□□□□ 0.59
SEMA6C-208ENST00000489944 DHX29Q7Z478 1369 aaKnown RBP18.71■□□□□ 0.59
SEMA6C-208ENST00000489944 C3P01024 1663 aa18.7■□□□□ 0.58
SEMA6C-208ENST00000489944 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
SEMA6C-208ENST00000489944 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
SEMA6C-208ENST00000489944 APLP2Q06481 763 aa18.7■□□□□ 0.58
SEMA6C-208ENST00000489944 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
SEMA6C-208ENST00000489944 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
SEMA6C-208ENST00000489944 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
SEMA6C-208ENST00000489944 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
SEMA6C-208ENST00000489944 HSPA2P54652 639 aa18.65■□□□□ 0.58
SEMA6C-208ENST00000489944 ILDR1Q86SU0 546 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-208ENST00000489944 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
SEMA6C-208ENST00000489944 GGT6Q6P531 493 aa18.62■□□□□ 0.57
SEMA6C-208ENST00000489944 FBXO41Q8TF61 875 aa18.62■□□□□ 0.57
SEMA6C-208ENST00000489944 KANK4Q5T7N3 995 aaPredicted RBP18.61■□□□□ 0.57
SEMA6C-208ENST00000489944 PTPRTO14522 1441 aa18.59■□□□□ 0.57
SEMA6C-208ENST00000489944 CLTCQ00610 1675 aaKnown RBP18.59■□□□□ 0.57
SEMA6C-208ENST00000489944 PTPRKQ15262 1439 aa18.57■□□□□ 0.56
SEMA6C-208ENST00000489944 KIF3BO15066 747 aa18.57■□□□□ 0.56
SEMA6C-208ENST00000489944 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
SEMA6C-208ENST00000489944 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
SEMA6C-208ENST00000489944 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
SEMA6C-208ENST00000489944 ZNF142P52746 1687 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms