RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PTPRMP28827 1452 aa31.73■■■□□ 2.67
TNFRSF1B-202ENST00000489921 POGZQ7Z3K3 1410 aa31.73■■■□□ 2.67
TNFRSF1B-202ENST00000489921 EFCAB2Q5VUJ9 269 aa31.71■■■□□ 2.67
TNFRSF1B-202ENST00000489921 MADDQ8WXG6 1647 aa31.71■■■□□ 2.67
TNFRSF1B-202ENST00000489921 ZFYVE16Q7Z3T8 1539 aa31.7■■■□□ 2.67
TNFRSF1B-202ENST00000489921 MAGI2Q86UL8 1455 aa31.7■■■□□ 2.66
TNFRSF1B-202ENST00000489921 ARID4BQ4LE39 1312 aaPredicted RBP31.7■■■□□ 2.66
TNFRSF1B-202ENST00000489921 CLIP1P30622 1438 aa31.68■■■□□ 2.66
TNFRSF1B-202ENST00000489921 CCDC18Q5T9S5 1454 aa31.67■■■□□ 2.66
TNFRSF1B-202ENST00000489921 CDC42BPBQ9Y5S2 1711 aa31.66■■■□□ 2.66
TNFRSF1B-202ENST00000489921 FYCO1Q9BQS8 1478 aa31.64■■■□□ 2.66
TNFRSF1B-202ENST00000489921 ARHGAP5Q13017 1502 aa31.63■■■□□ 2.65
TNFRSF1B-202ENST00000489921 RIMS1Q86UR5 1692 aaKnown RBP31.58■■■□□ 2.65
TNFRSF1B-202ENST00000489921 PREX2Q70Z35 1606 aa31.57■■■□□ 2.64
TNFRSF1B-202ENST00000489921 KDM5CP41229 1560 aa31.56■■■□□ 2.64
TNFRSF1B-202ENST00000489921 AFAP1Q8N556 730 aa31.55■■■□□ 2.64
TNFRSF1B-202ENST00000489921 ATP10AO60312 1499 aa31.54■■■□□ 2.64
TNFRSF1B-202ENST00000489921 ZNF518AQ6AHZ1 1483 aa31.54■■■□□ 2.64
TNFRSF1B-202ENST00000489921 CDC42BPAQ5VT25 1732 aa31.54■■■□□ 2.64
TNFRSF1B-202ENST00000489921 ARHGEF12Q9NZN5 1544 aa31.51■■■□□ 2.63
TNFRSF1B-202ENST00000489921 C9orf84Q5VXU9 1444 aa31.49■■■□□ 2.63
TNFRSF1B-202ENST00000489921 ABCC1P33527 1531 aa31.48■■■□□ 2.63
TNFRSF1B-202ENST00000489921 MLECQ14165 292 aa31.45■■■□□ 2.63
TNFRSF1B-202ENST00000489921 TRAPPC8Q9Y2L5 1435 aa31.45■■■□□ 2.63
TNFRSF1B-202ENST00000489921 FER1L4A9Z1Z3 1794 aa31.45■■■□□ 2.62
TNFRSF1B-202ENST00000489921 ITSN2Q9NZM3 1697 aa31.44■■■□□ 2.62
TNFRSF1B-202ENST00000489921 LMTK3Q96Q04 1460 aa31.43■■■□□ 2.62
TNFRSF1B-202ENST00000489921 DIP2CQ9Y2E4 1556 aa31.43■■■□□ 2.62
TNFRSF1B-202ENST00000489921 MLH3Q9UHC1 1453 aa31.42■■■□□ 2.62
TNFRSF1B-202ENST00000489921 GPATCH8Q9UKJ3 1502 aaKnown RBP31.4■■■□□ 2.62
TNFRSF1B-202ENST00000489921 ABCA6Q8N139 1617 aa31.4■■■□□ 2.62
TNFRSF1B-202ENST00000489921 ILDR1Q86SU0 546 aaPredicted RBP31.37■■■□□ 2.61
TNFRSF1B-202ENST00000489921 SAMD9LQ8IVG5 1584 aa31.37■■■□□ 2.61
TNFRSF1B-202ENST00000489921 REREQ9P2R6 1566 aa31.37■■■□□ 2.61
TNFRSF1B-202ENST00000489921 CEP162Q5TB80 1403 aa31.36■■■□□ 2.61
TNFRSF1B-202ENST00000489921 KIDINS220Q9ULH0 1771 aa31.35■■■□□ 2.61
TNFRSF1B-202ENST00000489921 PLPPR3Q6T4P5 718 aa31.32■■■□□ 2.6
TNFRSF1B-202ENST00000489921 MYT1LQ9UL68 1186 aa31.3■■■□□ 2.6
TNFRSF1B-202ENST00000489921 ZNF777Q9ULD5 760 aaPredicted RBP31.28■■■□□ 2.6
TNFRSF1B-202ENST00000489921 SYCP2Q9BX26 1530 aa31.28■■■□□ 2.6
TNFRSF1B-202ENST00000489921 MTUS2Q5JR59 1369 aa31.27■■■□□ 2.6
TNFRSF1B-202ENST00000489921 AGLP35573 1532 aa31.26■■■□□ 2.59
TNFRSF1B-202ENST00000489921 HNRNPMP52272 730 aaKnown RBP eCLIP31.25■■■□□ 2.59
TNFRSF1B-202ENST00000489921 CCNB3Q8WWL7 1395 aa31.24■■■□□ 2.59
TNFRSF1B-202ENST00000489921 CEBPAP49715 358 aaPredicted RBP31.23■■■□□ 2.59
TNFRSF1B-202ENST00000489921 HSPA2P54652 639 aa31.22■■■□□ 2.59
TNFRSF1B-202ENST00000489921 CFDP1Q9UEE9 299 aaPredicted RBP31.22■■■□□ 2.59
TNFRSF1B-202ENST00000489921 KIAA1107Q9UPP5 1409 aa31.22■■■□□ 2.59
TNFRSF1B-202ENST00000489921 TIAM1Q13009 1591 aa31.22■■■□□ 2.59
TNFRSF1B-202ENST00000489921 EHBP1L1Q8N3D4 1523 aa31.2■■■□□ 2.59
TNFRSF1B-202ENST00000489921 LOC105371045A0A1W2PR82 267 aa31.2■■■□□ 2.59
TNFRSF1B-202ENST00000489921 PLEKHH2Q8IVE3 1493 aa31.16■■■□□ 2.58
TNFRSF1B-202ENST00000489921 PREX1Q8TCU6 1659 aa31.16■■■□□ 2.58
TNFRSF1B-202ENST00000489921 INO80Q9ULG1 1556 aaPredicted RBP31.14■■■□□ 2.58
TNFRSF1B-202ENST00000489921 SPAG9O60271 1321 aaKnown RBP31.14■■■□□ 2.58
TNFRSF1B-202ENST00000489921 ZNF644Q9H582 1327 aaPredicted RBP31.14■■■□□ 2.58
TNFRSF1B-202ENST00000489921 C3P01024 1663 aa31.13■■■□□ 2.57
TNFRSF1B-202ENST00000489921 ATP7AQ04656 1500 aa31.12■■■□□ 2.57
TNFRSF1B-202ENST00000489921 MBD5Q9P267 1494 aa31.09■■■□□ 2.57
TNFRSF1B-202ENST00000489921 SETD1BQ9UPS6 1966 aaKnown RBP31.09■■■□□ 2.57
TNFRSF1B-202ENST00000489921 SUPT6HQ7KZ85 1726 aaKnown RBP31.08■■■□□ 2.57
TNFRSF1B-202ENST00000489921 PLXNC1O60486 1568 aa31.07■■■□□ 2.56
TNFRSF1B-202ENST00000489921 NCOA2Q15596 1464 aa31.04■■■□□ 2.56
TNFRSF1B-202ENST00000489921 VPS8Q8N3P4 1428 aa31.03■■■□□ 2.56
TNFRSF1B-202ENST00000489921 A2MP01023 1474 aa31.01■■■□□ 2.56
TNFRSF1B-202ENST00000489921 STRCQ7RTU9 1775 aa31■■■□□ 2.55
TNFRSF1B-202ENST00000489921 CNTLNQ9NXG0 1405 aa30.99■■■□□ 2.55
TNFRSF1B-202ENST00000489921 UHRF1BP1Q6BDS2 1440 aa30.98■■■□□ 2.55
TNFRSF1B-202ENST00000489921 MROH2AA6NES4 1674 aa30.98■■■□□ 2.55
TNFRSF1B-202ENST00000489921 ESF1Q9H501 851 aaKnown RBP30.98■■■□□ 2.55
TNFRSF1B-202ENST00000489921 ADGBQ8N7X0 1667 aa30.97■■■□□ 2.55
TNFRSF1B-202ENST00000489921 FBXO41Q8TF61 875 aa30.96■■■□□ 2.55
TNFRSF1B-202ENST00000489921 RTEL1-TNFRSF6BF6WH68 1400 aa30.95■■■□□ 2.54
TNFRSF1B-202ENST00000489921 LRRC9Q6ZRR7 1453 aa30.94■■■□□ 2.54
TNFRSF1B-202ENST00000489921 CAMSAP2Q08AD1 1489 aa30.93■■■□□ 2.54
TNFRSF1B-202ENST00000489921 ZMYM3Q14202 1370 aa30.92■■■□□ 2.54
TNFRSF1B-202ENST00000489921 CLTCQ00610 1675 aaKnown RBP30.91■■■□□ 2.54
TNFRSF1B-202ENST00000489921 KANK4Q5T7N3 995 aaPredicted RBP30.88■■■□□ 2.53
TNFRSF1B-202ENST00000489921 CCDC141Q6ZP82 1450 aa30.88■■■□□ 2.53
TNFRSF1B-202ENST00000489921 MAP3K1Q13233 1512 aa30.88■■■□□ 2.53
TNFRSF1B-202ENST00000489921 NPATQ14207 1427 aa30.87■■■□□ 2.53
TNFRSF1B-202ENST00000489921 DHX29Q7Z478 1369 aaKnown RBP30.85■■■□□ 2.53
TNFRSF1B-202ENST00000489921 GGT6Q6P531 493 aa30.85■■■□□ 2.53
TNFRSF1B-202ENST00000489921 ARHGEF5Q12774 1597 aa30.83■■■□□ 2.53
TNFRSF1B-202ENST00000489921 RSPH4AQ5TD94 716 aa30.82■■■□□ 2.52
TNFRSF1B-202ENST00000489921 PPP6R1Q9UPN7 881 aa30.8■■■□□ 2.52
TNFRSF1B-202ENST00000489921 PTPRKQ15262 1439 aa30.79■■■□□ 2.52
TNFRSF1B-202ENST00000489921 CERKQ8TCT0 537 aa30.77■■■□□ 2.52
TNFRSF1B-202ENST00000489921 DMRT2Q9Y5R5 561 aa30.77■■■□□ 2.52
TNFRSF1B-202ENST00000489921 PTPRTO14522 1441 aa30.73■■■□□ 2.51
TNFRSF1B-202ENST00000489921 NCOA1Q15788 1441 aa30.73■■■□□ 2.51
TNFRSF1B-202ENST00000489921 MYO3AQ8NEV4 1616 aa30.72■■■□□ 2.51
TNFRSF1B-202ENST00000489921 KIF3BO15066 747 aa30.71■■■□□ 2.51
TNFRSF1B-202ENST00000489921 MYOM3Q5VTT5 1437 aa30.71■■■□□ 2.51
TNFRSF1B-202ENST00000489921 ZNF142P52746 1687 aaPredicted RBP30.71■■■□□ 2.51
TNFRSF1B-202ENST00000489921 CAMSAP1Q5T5Y3 1602 aa30.7■■■□□ 2.51
TNFRSF1B-202ENST00000489921 MIA2Q96PC5 1412 aa30.69■■■□□ 2.5
TNFRSF1B-202ENST00000489921 MAST1Q9Y2H9 1570 aa30.69■■■□□ 2.5
TNFRSF1B-202ENST00000489921 TSPY4P0CV99 314 aa30.68■■■□□ 2.5
TNFRSF1B-202ENST00000489921 TSPY10P0CW01 314 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms