RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 CLIP1P30622 1438 aa18.06■□□□□ 0.48
GABBR1-217ENST00000489839 CDC42BPBQ9Y5S2 1711 aa18.04■□□□□ 0.48
GABBR1-217ENST00000489839 MADDQ8WXG6 1647 aa18.04■□□□□ 0.48
GABBR1-217ENST00000489839 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
GABBR1-217ENST00000489839 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
GABBR1-217ENST00000489839 PTPRMP28827 1452 aa18.03■□□□□ 0.48
GABBR1-217ENST00000489839 ZFYVE16Q7Z3T8 1539 aa18.03■□□□□ 0.48
GABBR1-217ENST00000489839 EFCAB2Q5VUJ9 269 aa18.02■□□□□ 0.48
GABBR1-217ENST00000489839 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
GABBR1-217ENST00000489839 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
GABBR1-217ENST00000489839 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
GABBR1-217ENST00000489839 MAGI2Q86UL8 1455 aa17.98■□□□□ 0.47
GABBR1-217ENST00000489839 RIMS1Q86UR5 1692 aaKnown RBP17.98■□□□□ 0.47
GABBR1-217ENST00000489839 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
GABBR1-217ENST00000489839 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
GABBR1-217ENST00000489839 CDC42BPAQ5VT25 1732 aa17.97■□□□□ 0.47
GABBR1-217ENST00000489839 ARHGEF12Q9NZN5 1544 aa17.97■□□□□ 0.47
GABBR1-217ENST00000489839 KDM5CP41229 1560 aa17.94■□□□□ 0.46
GABBR1-217ENST00000489839 ATP10AO60312 1499 aa17.93■□□□□ 0.46
GABBR1-217ENST00000489839 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
GABBR1-217ENST00000489839 MLECQ14165 292 aa17.92■□□□□ 0.46
GABBR1-217ENST00000489839 ZNF518AQ6AHZ1 1483 aa17.92■□□□□ 0.46
GABBR1-217ENST00000489839 ABCC1P33527 1531 aa17.92■□□□□ 0.46
GABBR1-217ENST00000489839 ITSN2Q9NZM3 1697 aa17.91■□□□□ 0.46
GABBR1-217ENST00000489839 CEP162Q5TB80 1403 aa17.89■□□□□ 0.46
GABBR1-217ENST00000489839 DIP2CQ9Y2E4 1556 aa17.89■□□□□ 0.45
GABBR1-217ENST00000489839 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
GABBR1-217ENST00000489839 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.45
GABBR1-217ENST00000489839 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
GABBR1-217ENST00000489839 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
GABBR1-217ENST00000489839 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
GABBR1-217ENST00000489839 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
GABBR1-217ENST00000489839 LOC105371045A0A1W2PR82 267 aa17.87■□□□□ 0.45
GABBR1-217ENST00000489839 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
GABBR1-217ENST00000489839 MLH3Q9UHC1 1453 aa17.85■□□□□ 0.45
GABBR1-217ENST00000489839 KIDINS220Q9ULH0 1771 aa17.85■□□□□ 0.45
GABBR1-217ENST00000489839 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
GABBR1-217ENST00000489839 MYT1LQ9UL68 1186 aa17.83■□□□□ 0.44
GABBR1-217ENST00000489839 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
GABBR1-217ENST00000489839 HNRNPMP52272 730 aaKnown RBP eCLIP17.81■□□□□ 0.44
GABBR1-217ENST00000489839 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
GABBR1-217ENST00000489839 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
GABBR1-217ENST00000489839 REREQ9P2R6 1566 aa17.8■□□□□ 0.44
GABBR1-217ENST00000489839 CEBPAP49715 358 aaPredicted RBP17.8■□□□□ 0.44
GABBR1-217ENST00000489839 HSPA2P54652 639 aa17.79■□□□□ 0.44
GABBR1-217ENST00000489839 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
GABBR1-217ENST00000489839 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
GABBR1-217ENST00000489839 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
GABBR1-217ENST00000489839 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
GABBR1-217ENST00000489839 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
GABBR1-217ENST00000489839 AGLP35573 1532 aa17.76■□□□□ 0.43
GABBR1-217ENST00000489839 KIAA1107Q9UPP5 1409 aa17.73■□□□□ 0.43
GABBR1-217ENST00000489839 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
GABBR1-217ENST00000489839 INO80Q9ULG1 1556 aaPredicted RBP17.72■□□□□ 0.43
GABBR1-217ENST00000489839 C3P01024 1663 aa17.71■□□□□ 0.43
GABBR1-217ENST00000489839 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
GABBR1-217ENST00000489839 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
GABBR1-217ENST00000489839 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
GABBR1-217ENST00000489839 MBD5Q9P267 1494 aa17.7■□□□□ 0.42
GABBR1-217ENST00000489839 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
GABBR1-217ENST00000489839 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
GABBR1-217ENST00000489839 PREX1Q8TCU6 1659 aa17.69■□□□□ 0.42
GABBR1-217ENST00000489839 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
GABBR1-217ENST00000489839 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
GABBR1-217ENST00000489839 A2MP01023 1474 aa17.64■□□□□ 0.41
GABBR1-217ENST00000489839 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
GABBR1-217ENST00000489839 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
GABBR1-217ENST00000489839 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
GABBR1-217ENST00000489839 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
GABBR1-217ENST00000489839 ADGBQ8N7X0 1667 aa17.61■□□□□ 0.41
GABBR1-217ENST00000489839 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
GABBR1-217ENST00000489839 MROH2AA6NES4 1674 aa17.59■□□□□ 0.41
GABBR1-217ENST00000489839 UHRF1BP1Q6BDS2 1440 aa17.59■□□□□ 0.41
GABBR1-217ENST00000489839 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
GABBR1-217ENST00000489839 ESF1Q9H501 851 aaKnown RBP17.59■□□□□ 0.41
GABBR1-217ENST00000489839 CCDC141Q6ZP82 1450 aa17.57■□□□□ 0.4
GABBR1-217ENST00000489839 RTEL1-TNFRSF6BF6WH68 1400 aa17.57■□□□□ 0.4
GABBR1-217ENST00000489839 ZMYM3Q14202 1370 aa17.57■□□□□ 0.4
GABBR1-217ENST00000489839 GGT6Q6P531 493 aa17.57■□□□□ 0.4
GABBR1-217ENST00000489839 MAP3K1Q13233 1512 aa17.56■□□□□ 0.4
GABBR1-217ENST00000489839 DHX29Q7Z478 1369 aaKnown RBP17.54■□□□□ 0.4
GABBR1-217ENST00000489839 FBXO41Q8TF61 875 aa17.54■□□□□ 0.4
GABBR1-217ENST00000489839 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
GABBR1-217ENST00000489839 NPATQ14207 1427 aa17.51■□□□□ 0.39
GABBR1-217ENST00000489839 PTPRKQ15262 1439 aa17.51■□□□□ 0.39
GABBR1-217ENST00000489839 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
GABBR1-217ENST00000489839 KIF3BO15066 747 aa17.49■□□□□ 0.39
GABBR1-217ENST00000489839 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
GABBR1-217ENST00000489839 MYO3AQ8NEV4 1616 aa17.47■□□□□ 0.39
GABBR1-217ENST00000489839 CERKQ8TCT0 537 aa17.47■□□□□ 0.39
GABBR1-217ENST00000489839 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
GABBR1-217ENST00000489839 CAMSAP1Q5T5Y3 1602 aa17.46■□□□□ 0.39
GABBR1-217ENST00000489839 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
GABBR1-217ENST00000489839 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
GABBR1-217ENST00000489839 MIA2Q96PC5 1412 aa17.45■□□□□ 0.38
GABBR1-217ENST00000489839 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
GABBR1-217ENST00000489839 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
GABBR1-217ENST00000489839 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
GABBR1-217ENST00000489839 FBXO31Q5XUX0 539 aaPredicted RBP17.44■□□□□ 0.38
GABBR1-217ENST00000489839 PTPRTO14522 1441 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms