RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ABCA9Q8IUA7 1624 aa14.59□□□□□ -0.07
NOD1-208ENST00000489614 ADGBQ8N7X0 1667 aa14.59□□□□□ -0.07
NOD1-208ENST00000489614 GPATCH8Q9UKJ3 1502 aaKnown RBP14.58□□□□□ -0.07
NOD1-208ENST00000489614 ARAP3Q8WWN8 1544 aa14.58□□□□□ -0.08
NOD1-208ENST00000489614 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
NOD1-208ENST00000489614 ARHGEF5Q12774 1597 aa14.55□□□□□ -0.08
NOD1-208ENST00000489614 SAMD9LQ8IVG5 1584 aa14.55□□□□□ -0.08
NOD1-208ENST00000489614 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
NOD1-208ENST00000489614 PTPRKQ15262 1439 aa14.52□□□□□ -0.08
NOD1-208ENST00000489614 AKNAQ7Z591 1439 aa14.52□□□□□ -0.09
NOD1-208ENST00000489614 MAST1Q9Y2H9 1570 aa14.51□□□□□ -0.09
NOD1-208ENST00000489614 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
NOD1-208ENST00000489614 WDR7Q9Y4E6 1490 aa14.5□□□□□ -0.09
NOD1-208ENST00000489614 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
NOD1-208ENST00000489614 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
NOD1-208ENST00000489614 SHANK2Q9UPX8 1470 aa14.47□□□□□ -0.09
NOD1-208ENST00000489614 GLI2P10070 1586 aa14.47□□□□□ -0.09
NOD1-208ENST00000489614 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
NOD1-208ENST00000489614 ABCC1P33527 1531 aa14.45□□□□□ -0.1
NOD1-208ENST00000489614 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
NOD1-208ENST00000489614 DAPK1P53355 1430 aa14.44□□□□□ -0.1
NOD1-208ENST00000489614 KDM6BO15054 1643 aa14.44□□□□□ -0.1
NOD1-208ENST00000489614 ATP1B4Q9UN42 357 aaPredicted RBP14.44□□□□□ -0.1
NOD1-208ENST00000489614 PPRC1Q5VV67 1664 aaKnown RBP14.44□□□□□ -0.1
NOD1-208ENST00000489614 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
NOD1-208ENST00000489614 ABCC5O15440 1437 aa14.43□□□□□ -0.1
NOD1-208ENST00000489614 PLXNC1O60486 1568 aa14.43□□□□□ -0.1
NOD1-208ENST00000489614 CFAP74Q9C0B2 1584 aa14.42□□□□□ -0.1
NOD1-208ENST00000489614 ASXL2Q76L83 1435 aa14.42□□□□□ -0.1
NOD1-208ENST00000489614 KIF13AQ9H1H9 1805 aa14.42□□□□□ -0.1
NOD1-208ENST00000489614 PLCH2O75038 1416 aa14.41□□□□□ -0.1
NOD1-208ENST00000489614 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
NOD1-208ENST00000489614 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
NOD1-208ENST00000489614 NAIPQ13075 1403 aa14.39□□□□□ -0.11
NOD1-208ENST00000489614 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
NOD1-208ENST00000489614 ARHGEF12Q9NZN5 1544 aa14.39□□□□□ -0.11
NOD1-208ENST00000489614 KIAA1107Q9UPP5 1409 aa14.38□□□□□ -0.11
NOD1-208ENST00000489614 INO80Q9ULG1 1556 aaPredicted RBP14.38□□□□□ -0.11
NOD1-208ENST00000489614 SYCP2Q9BX26 1530 aa14.37□□□□□ -0.11
NOD1-208ENST00000489614 SETD5Q9C0A6 1442 aa14.36□□□□□ -0.11
NOD1-208ENST00000489614 ARID3CA6NKF2 412 aa14.36□□□□□ -0.11
NOD1-208ENST00000489614 PLEKHH2Q8IVE3 1493 aa14.35□□□□□ -0.11
NOD1-208ENST00000489614 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
NOD1-208ENST00000489614 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
NOD1-208ENST00000489614 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
NOD1-208ENST00000489614 BCORL1Q5H9F3 1711 aa14.34□□□□□ -0.11
NOD1-208ENST00000489614 KDM5DQ9BY66 1539 aa14.33□□□□□ -0.12
NOD1-208ENST00000489614 RICTORQ6R327 1708 aa14.33□□□□□ -0.12
NOD1-208ENST00000489614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
NOD1-208ENST00000489614 RAB3GAP2Q9H2M9 1393 aa14.33□□□□□ -0.12
NOD1-208ENST00000489614 DENND4BO75064 1496 aaPredicted RBP14.33□□□□□ -0.12
NOD1-208ENST00000489614 KDM5CP41229 1560 aa14.33□□□□□ -0.12
NOD1-208ENST00000489614 CCDC141Q6ZP82 1450 aa14.33□□□□□ -0.12
NOD1-208ENST00000489614 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
NOD1-208ENST00000489614 UNC13BO14795 1591 aa14.32□□□□□ -0.12
NOD1-208ENST00000489614 ZNF644Q9H582 1327 aaPredicted RBP14.31□□□□□ -0.12
NOD1-208ENST00000489614 ZFYVE16Q7Z3T8 1539 aa14.31□□□□□ -0.12
NOD1-208ENST00000489614 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
NOD1-208ENST00000489614 NCOA1Q15788 1441 aa14.3□□□□□ -0.12
NOD1-208ENST00000489614 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
NOD1-208ENST00000489614 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
NOD1-208ENST00000489614 CCER1Q8TC90 406 aaPredicted RBP14.28□□□□□ -0.12
NOD1-208ENST00000489614 FRMPD1Q5SYB0 1578 aa14.28□□□□□ -0.12
NOD1-208ENST00000489614 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
NOD1-208ENST00000489614 EIF2AK4Q9P2K8 1649 aaKnown RBP14.27□□□□□ -0.13
NOD1-208ENST00000489614 C9orf84Q5VXU9 1444 aa14.26□□□□□ -0.13
NOD1-208ENST00000489614 FAM50AQ14320 339 aaKnown RBP14.26□□□□□ -0.13
NOD1-208ENST00000489614 CFDP1Q9UEE9 299 aaPredicted RBP14.26□□□□□ -0.13
NOD1-208ENST00000489614 FANCAO15360 1455 aa14.25□□□□□ -0.13
NOD1-208ENST00000489614 NEO1Q92859 1461 aa14.25□□□□□ -0.13
NOD1-208ENST00000489614 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
NOD1-208ENST00000489614 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
NOD1-208ENST00000489614 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
NOD1-208ENST00000489614 ZMYM4Q5VZL5 1548 aa14.22□□□□□ -0.13
NOD1-208ENST00000489614 TRAPPC8Q9Y2L5 1435 aa14.21□□□□□ -0.13
NOD1-208ENST00000489614 ATP7AQ04656 1500 aa14.21□□□□□ -0.13
NOD1-208ENST00000489614 DUOX2Q9NRD8 1548 aa14.21□□□□□ -0.13
NOD1-208ENST00000489614 MROH1Q8NDA8 1641 aa14.21□□□□□ -0.14
NOD1-208ENST00000489614 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.14
NOD1-208ENST00000489614 PZPP20742 1482 aa14.2□□□□□ -0.14
NOD1-208ENST00000489614 RNF17Q9BXT8 1623 aaKnown RBP14.2□□□□□ -0.14
NOD1-208ENST00000489614 HECW2Q9P2P5 1572 aa14.2□□□□□ -0.14
NOD1-208ENST00000489614 SUPT16HQ9Y5B9 1047 aaKnown RBP14.2□□□□□ -0.14
NOD1-208ENST00000489614 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
NOD1-208ENST00000489614 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
NOD1-208ENST00000489614 CD109Q6YHK3 1445 aa14.18□□□□□ -0.14
NOD1-208ENST00000489614 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
NOD1-208ENST00000489614 POGZQ7Z3K3 1410 aa14.18□□□□□ -0.14
NOD1-208ENST00000489614 ERBINQ96RT1 1412 aa14.17□□□□□ -0.14
NOD1-208ENST00000489614 MIER1Q8N108 512 aa14.17□□□□□ -0.14
NOD1-208ENST00000489614 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
NOD1-208ENST00000489614 ANKRD30AQ9BXX3 1397 aa14.16□□□□□ -0.14
NOD1-208ENST00000489614 TSPOAP1O95153 1857 aa14.15□□□□□ -0.14
NOD1-208ENST00000489614 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
NOD1-208ENST00000489614 ZNF518AQ6AHZ1 1483 aa14.15□□□□□ -0.14
NOD1-208ENST00000489614 DIP2CQ9Y2E4 1556 aa14.14□□□□□ -0.15
NOD1-208ENST00000489614 PRDM15P57071 1507 aaPredicted RBP14.14□□□□□ -0.15
NOD1-208ENST00000489614 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
NOD1-208ENST00000489614 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
NOD1-208ENST00000489614 ANKRD50Q9ULJ7 1429 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms